Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033101.1 Olea europaea HOM05D004669 ORTHO05D005767 8.3e-96 353.6 167 100.0
Nitab4.5_0000671g0170 Nicotiana tabacum HOM05D004669 ORTHO05D005767 1.3e-67 260.0 130 90.8
Sopen03g038950 Solanum pennellii HOM05D004669 ORTHO05D005767 2.8e-67 258.8 130 90.0
Nitab4.5_0023790g0010 Nicotiana tabacum HOM05D004669 ORTHO05D005767 3.6e-67 258.5 130 90.0
Dinv30566 Davidia involucrata HOM05D004669 ORTHO05D005767 8.1e-67 257.3 128 93.0
PGSC0003DMG400005691 Solanum tuberosum HOM05D004669 ORTHO05D005767 8.1e-67 257.3 130 89.2
Actinidia15803 Actinidia chinensis HOM05D004669 ORTHO05D005767 1.4e-66 256.5 130 90.8
Hund06583 Selenicereus undatus HOM05D004669 ORTHO05D005767 4.0e-66 255.0 130 88.5
Cc04_g03970 Coffea canephora HOM05D004669 ORTHO05D005767 6.9e-66 254.2 130 88.5
MBI04_g45208_MAGBIO Magnolia biondii HOM05D004669 ORTHO05D005767 1.5e-65 253.1 130 90.0
SalBow2G0244 Salvia bowleyana HOM05D004669 ORTHO05D005767 1.5e-65 253.1 128 92.2
SGA_v2.0_scaffold5G02661 Striga asiatica HOM05D004669 ORTHO05D005767 2.0e-65 252.7 130 89.2
Actinidia01772 Actinidia chinensis HOM05D004669 ORTHO05D005767 2.6e-65 252.3 130 89.2
HanXRQChr04g0097171 Helianthus annuus HOM05D004669 ORTHO05D005767 2.6e-65 252.3 130 88.5
AUR62016387 Chenopodium quinoa HOM05D004669 ORTHO05D005767 3.4e-65 251.9 130 87.7
EL10Ac9g21952 Beta vulgaris HOM05D004669 ORTHO05D005767 5.8e-65 251.1 128 89.1
Ah.08g209920 Amaranthus hybridus HOM05D004669 ORTHO05D005767 1.3e-64 250.0 128 88.3
Migut.I00803 Erythranthe guttata HOM05D004669 ORTHO05D005767 1.3e-64 250.0 129 89.9
AUR62011570 Chenopodium quinoa HOM05D004669 ORTHO05D005767 1.7e-64 249.6 130 86.9
Rhsim08G0216600 Rhododendron simsii HOM05D004669 ORTHO05D005767 1.7e-64 249.6 130 87.7
GSVIVG01017243001 Vitis vinifera HOM05D004669 ORTHO05D005767 3.8e-64 248.4 128 89.1
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 4.9e-64 248.1 130 87.7
Duzib192G0063 Durio zibethinus HOM05D004669 ORTHO05D005767 6.4e-64 247.7 124 90.3
vmacro18956 Vaccinium macrocarpon HOM05D004669 ORTHO05D005767 6.4e-64 247.7 130 86.9
HPP92_024438 Vanilla planifolia HOM05D004669 ORTHO05D005767 8.4e-64 247.3 128 86.7
ECA247G3964 Erigeron canadensis HOM05D004669 ORTHO05D005767 1.1e-63 246.9 128 88.3
Sc12g0008880 Simmondsia chinensis HOM05D004669 ORTHO05D005767 1.1e-63 246.9 128 86.7
MSTRG.22725 Avicennia marina HOM05D004669 ORTHO05D005767 1.4e-63 246.5 128 89.8
HanXRQChr04g0096711 Helianthus annuus HOM05D004669 ORTHO05D005767 1.4e-63 246.5 130 86.9
Nn8g39375 Nelumbo nucifera HOM05D004669 ORTHO05D005767 1.4e-63 246.5 128 88.3
Lsat_1_v5_gn_1_33541 Lactuca sativa HOM05D004669 ORTHO05D005767 1.9e-63 246.1 128 87.5
Gohir.D09G084800 Gossypium hirsutum HOM05D004669 ORTHO05D005767 3.2e-63 245.4 124 88.7
Gorai.006G100800 Gossypium raimondii HOM05D004669 ORTHO05D005767 3.2e-63 245.4 124 88.7
Potri.003G060500 Populus trichocarpa HOM05D004669 ORTHO05D005767 3.2e-63 245.4 128 85.9
TAR636G0609 Trochodendron aralioides HOM05D004669 ORTHO05D005767 4.2e-63 245.0 128 87.5
Gohir.A09G084900 Gossypium hirsutum HOM05D004669 ORTHO05D005767 7.1e-63 244.2 124 88.7
Ciclev10024861m.g Citrus clementina HOM05D004669 ORTHO05D005767 9.3e-63 243.8 128 86.7
CANSAT56G1977 Cannabis sativa HOM05D004669 ORTHO05D005767 1.2e-62 243.4 128 87.5
Lj5A68G59 Lonicera japonica HOM05D004669 ORTHO05D005767 1.2e-62 243.4 128 87.5
Os05g0519500 Oryza sativa ssp. japonica HOM05D004669 ORTHO05D005767 1.2e-62 243.4 128 86.7
TAR627G0037 Trochodendron aralioides HOM05D004669 ORTHO05D005767 1.6e-62 243.0 130 84.6
COL.COLO4_12887 Corchorus olitorius HOM05D004669 ORTHO05D005767 2.7e-62 242.3 124 87.9
Glyma.15G193000 Glycine max HOM05D004669 ORTHO05D005767 3.5e-62 241.9 128 86.7
Aqoxy7G02078 Aquilegia oxysepala HOM05D004669 ORTHO05D005767 1.0e-61 240.4 130 83.8
CDE04G1486 Ceratophyllum demersum HOM05D004669 ORTHO05D005767 1.8e-61 239.6 128 88.3
PSO541G6522 Papaver somniferum HOM05D004669 ORTHO05D005767 1.8e-61 239.6 130 83.8
PSO675G6139 Papaver somniferum HOM05D004669 ORTHO05D005767 1.8e-61 239.6 130 83.8
Potri.001G173500 Populus trichocarpa HOM05D004669 ORTHO05D005767 1.8e-61 239.6 128 84.4
Sabra01G0138300 Salix brachista HOM05D004669 ORTHO05D005767 1.8e-61 239.6 128 84.4
TPR.G37778 Trifolium pratense HOM05D004669 ORTHO05D005767 1.8e-61 239.6 128 85.9
Ca_02514_v3 Cicer arietinum L. HOM05D004669 ORTHO05D005767 2.3e-61 239.2 124 86.3
Glyma.09G084600 Glycine max HOM05D004669 ORTHO05D005767 2.3e-61 239.2 128 85.9
THA.LOC104812492 Tarenaya hassleriana HOM05D004669 ORTHO05D005767 2.3e-61 239.2 128 84.4
TWI12G0769 Tripterygium wilfordii HOM05D004669 ORTHO05D005767 5.1e-61 238.0 128 85.9
Prupe.3G078900 Prunus persica HOM05D004669 ORTHO05D005767 6.7e-61 237.7 124 87.9
Cpa.g.sc10.221 Carica papaya HOM05D004669 ORTHO05D005767 8.7e-61 237.3 128 82.8
Phvul.009G217600 Phaseolus vulgaris HOM05D004669 ORTHO05D005767 8.7e-61 237.3 124 87.9
arahy.Tifrunner.gnm1.ann1.DS860L Arachis hypogaea HOM05D004669 ORTHO05D005767 1.1e-60 236.9 124 85.5
VMungo1309G3168 Vigna mungo HOM05D004669 ORTHO05D005767 1.1e-60 236.9 128 85.9
Lalb_Chr11g0073441 Lupinus albus HOM05D004669 ORTHO05D005767 1.5e-60 236.5 124 85.5
Medtr7g076230 Medicago truncatula HOM05D004669 ORTHO05D005767 1.5e-60 236.5 128 85.2
Aa31LG7G190 Aethionema arabicum HOM05D004669 ORTHO05D005767 1.9e-60 236.1 128 84.4
MD17G1203900 Malus domestica HOM05D004669 ORTHO05D005767 1.9e-60 236.1 128 84.4
Manes.11G052400 Manihot esculenta HOM05D004669 ORTHO05D005767 1.9e-60 236.1 128 84.4
arahy.Tifrunner.gnm1.ann1.L4R828 Arachis hypogaea HOM05D004669 ORTHO05D005767 2.5e-60 235.7 124 84.7
Manes.04G117100 Manihot esculenta HOM05D004669 ORTHO05D005767 2.5e-60 235.7 129 83.7
Carub.0001s1524 Capsella rubella HOM05D004669 ORTHO05D005767 3.3e-60 235.3 128 82.0
Thecc.06G074100 Theobroma cacao HOM05D004669 ORTHO05D005767 4.3e-60 235.0 123 88.6
AL1G27560 Arabidopsis lyrata HOM05D004669 ORTHO05D005767 5.6e-60 234.6 128 82.0
CARHR016000 Cardamine hirsuta HOM05D004669 ORTHO05D005767 5.6e-60 234.6 128 81.2
Thhalv10006752m.g Eutrema salsugineum HOM05D004669 ORTHO05D005767 5.6e-60 234.6 128 81.2
Zm00001eb293800 Zea mays HOM05D004669 ORTHO05D005767 5.6e-60 234.6 128 83.6
ClCG07G012820 Citrullus lanatus HOM05D004669 ORTHO05D005767 1.6e-59 233.0 128 82.0
Sed0027531 Sechium edule HOM05D004669 ORTHO05D005767 1.6e-59 233.0 124 85.5
CAN.G438.78 Capsicum annuum HOM05D004669 ORTHO05D005767 2.1e-59 232.6 130 81.5
CiPaw.02G154600 Carya illinoinensis HOM05D004669 ORTHO05D005767 2.1e-59 232.6 124 83.9
A06p11500 Brassica napus HOM05D000746 ORTHO05D005767 2.8e-59 232.3 128 82.0
ClCG06G013830 Citrullus lanatus HOM05D004669 ORTHO05D005767 3.7e-59 231.9 128 82.0
PGR031G2027 Punica granatum HOM05D004669 ORTHO05D005767 3.7e-59 231.9 126 83.3
BcaC07g38791 Brassica carinata HOM05D004669 ORTHO05D005767 4.8e-59 231.5 128 81.2
A08p31560 Brassica napus HOM05D004669 ORTHO05D005767 4.8e-59 231.5 128 81.2
C08p17210 Brassica napus HOM05D004669 ORTHO05D005767 4.8e-59 231.5 128 81.2
BolC8t49350H Brassica oleracea HOM05D004669 ORTHO05D005767 4.8e-59 231.5 128 81.2
BraA08t35078Z Brassica rapa HOM05D004669 ORTHO05D005767 4.8e-59 231.5 128 81.2
Psat0s4195g0120 Pisum sativum HOM05D004669 ORTHO05D005767 4.8e-59 231.5 124 83.9
C05p13620 Brassica napus HOM05D004669 ORTHO05D005767 6.2e-59 231.1 128 81.2
BolC5t30098H Brassica oleracea HOM05D004669 ORTHO05D005767 6.2e-59 231.1 128 81.2
BraA06t24327Z Brassica rapa HOM05D000746 ORTHO05D005767 6.2e-59 231.1 128 81.2
BcaB03g13059 Brassica carinata HOM05D004669 ORTHO05D005767 8.1e-59 230.7 128 81.2
CsaV3_4G001370 Cucumis sativus L. HOM05D004669 ORTHO05D005767 8.1e-59 230.7 128 81.2
LjContig00155g0017542 Lotus japonicus HOM05D004669 ORTHO05D005767 1.1e-58 230.3 128 82.8
SEGI_00336 Sequoiadendron giganteum HOM05D004669 ORTHO05D005767 1.1e-58 230.3 131 78.6
FAN02G3057 Fragaria x ananassa HOM05D004669 ORTHO05D005767 1.4e-58 229.9 124 84.7
FAN09G4623 Fragaria x ananassa HOM05D004669 ORTHO05D005767 1.4e-58 229.9 124 84.7
FAN14G3011 Fragaria x ananassa HOM05D004669 ORTHO05D005767 1.4e-58 229.9 124 84.7
MELO3C017903.2 Cucumis melo HOM05D004669 ORTHO05D005767 2.4e-58 229.2 128 80.5
FAN05G0230 Fragaria x ananassa HOM05D004669 ORTHO05D005767 3.1e-58 228.8 124 84.7
QL05p027590 Quercus lobata HOM05D004669 ORTHO05D005767 4.0e-58 228.4 125 83.2
RcHm_v2.0_Chr2g0136751 Rosa chinensis HOM05D004669 ORTHO05D005767 5.3e-58 228.0 124 83.9
Sp1g13810 Schrenkiella parvula HOM05D004669 ORTHO05D005767 1.2e-57 226.9 128 78.9
TAR627G0296 Trochodendron aralioides HOM05D004669 ORTHO05D005767 1.2e-57 226.9 144 72.9
AT1G15440 Arabidopsis thaliana HOM05D004669 ORTHO05D005767 1.5e-57 226.5 128 78.1
FvH4_6g30400 Fragaria vesca HOM05D004669 ORTHO05D005767 1.5e-57 226.5 124 83.9
Haze_16509 Corylus avellana HOM05D004669 ORTHO05D005767 1.0e-53 213.8 124 75.8
Cfa002013 Carpinus fangiana HOM05D004669 ORTHO05D005767 1.3e-53 213.4 124 75.0
SMO356G0696 Selaginella moellendorffii HOM05D004669 ORTHO05D005767 1.6e-51 206.5 126 73.8
ATR0705G066 Amborella trichopoda HOM05D004669 ORTHO05D005767 4.0e-50 201.8 128 73.4
Mapoly0001s0129 Marchantia polymorpha HOM05D004669 ORTHO05D005767 1.3e-48 196.8 128 67.2
Sed0010016 Sechium edule HOM05D004669 ORTHO05D005767 1.1e-47 193.7 128 70.3
Sed0001284 Sechium edule HOM05D004669 ORTHO05D005767 1.4e-47 193.4 128 70.3
CBR_g51007 Chara braunii HOM05D004669 ORTHO05D005767 1.9e-47 193.0 124 69.4
Pp3c7_9990 Physcomitrium patens HOM05D004669 ORTHO05D005767 3.2e-47 192.2 124 66.9
Psat4g082440 Pisum sativum HOM05D004669 ORTHO05D005767 1.9e-44 183.0 97 84.5
Sed0020458 Sechium edule HOM05D004669 ORTHO05D005767 3.1e-42 175.6 128 68.0
Cre06.g254150 Chlamydomonas reinhardtii HOM05D004669 ORTHO05D005767 2.5e-36 156.0 124 52.4
Eucgr.J03040 Eucalyptus grandis HOM05D004669 ORTHO05D005767 3.3e-36 155.6 128 57.0
MCO13G313 Micromonas commoda HOM05D004669 ORTHO05D005767 3.4e-33 145.6 126 50.8
Solyc03g120080.4 Solanum lycopersicum HOM05D004669 ORTHO05D005767 6.5e-32 141.4 74 83.8
Peaxi162Scf00015g00456 Petunia axillaris HOM05D004669 ORTHO05D005767 7.2e-31 137.9 67 92.5
PRCOL_00000917 Prasinoderma coloniale HOM05D004669 ORTHO05D005767 3.4e-25 119.0 122 42.6
ECA247G0606 Erigeron canadensis HOM05D004669 ORTHO05D005767 2.7e-09 66.2 37 81.1


User provided reference genes

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