Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 1.7e-307 1058.5 530 100.0
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 1.3e-240 836.3 534 78.3
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.5e-236 822.8 533 77.7
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 5.5e-234 814.3 533 76.9
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 8.7e-232 807.0 529 76.7
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 5.3e-229 797.7 532 75.2
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 6.9e-229 797.3 532 75.2
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 1.5e-228 796.2 532 75.0
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 5.9e-228 794.3 536 75.6
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 1.0e-227 793.5 515 77.9
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.6e-222 776.2 538 74.0
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 1.8e-221 772.7 531 73.8
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 1.5e-220 769.6 535 73.5
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 5.0e-219 764.6 533 74.1
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 1.1e-218 763.5 521 73.5
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 5.1e-216 754.6 532 71.6
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 8.8e-216 753.8 535 73.1
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 2.0e-215 752.7 534 72.3
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 2.6e-215 752.3 532 73.1
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 5.7e-215 751.1 535 72.7
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 7.4e-215 750.7 555 70.8
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 4.8e-214 748.0 554 71.1
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 1.1e-213 746.9 556 70.5
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 1.1e-213 746.9 558 70.1
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 3.1e-213 745.3 549 72.9
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 1.5e-212 743.0 466 79.8
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 4.5e-212 741.5 535 71.4
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 1.0e-211 740.3 590 66.6
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 8.5e-211 737.3 534 70.2
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 1.1e-210 736.9 536 70.9
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.4e-210 736.5 563 69.4
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 5.5e-210 734.6 438 83.8
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 1.2e-209 733.4 507 73.2
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 2.7e-209 732.3 531 71.0
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.6e-209 731.9 562 69.0
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 4.7e-209 731.5 535 70.8
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 1.1e-207 726.9 535 70.5
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 1.5e-207 726.5 543 70.2
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.5e-207 726.5 533 71.1
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.7e-206 723.0 523 71.9
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 4.8e-206 721.5 529 70.3
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 6.3e-206 721.1 538 69.9
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 1.2e-204 716.8 505 74.5
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 2.2e-203 712.6 557 68.2
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 6.5e-203 711.1 549 68.1
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.9e-202 709.5 535 70.1
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 1.2e-201 706.8 504 71.6
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 1.2e-201 706.8 536 68.5
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 2.7e-201 705.7 501 70.5
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 1.4e-200 703.4 537 69.6
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 2.0e-199 699.5 537 69.3
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 9.7e-199 697.2 532 69.4
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 9.7e-199 697.2 536 68.1
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 1.7e-198 696.4 534 68.7
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 3.8e-195 685.3 500 70.8
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 5.5e-194 681.4 450 76.9
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.0e-192 677.2 533 67.2
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 2.3e-192 676.0 543 65.9
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 1.2e-191 673.7 516 67.2
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 3.4e-191 672.2 494 71.1
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 6.3e-190 667.9 505 67.7
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.4e-189 666.0 534 67.4
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 4.1e-189 665.2 479 72.0
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 9.1e-189 664.1 532 64.3
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 5.0e-187 658.3 549 65.6
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 1.5e-186 656.8 542 64.9
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 2.5e-186 656.0 501 68.9
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 3.2e-186 655.6 541 65.2
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 7.2e-186 654.4 541 65.1
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 1.4e-184 650.2 477 70.4
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 3.0e-184 649.0 539 64.7
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 3.0e-184 649.0 539 64.7
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 5.2e-184 648.3 545 63.5
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 6.8e-184 647.9 539 64.0
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 1.2e-183 647.1 539 64.6
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 1.7e-182 643.3 542 64.2
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 1.7e-182 643.3 546 63.2
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 6.3e-182 641.3 530 65.8
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 1.4e-181 640.2 542 63.8
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 3.1e-181 639.0 511 64.8
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 2.0e-180 636.3 544 64.3
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 2.3e-179 632.9 514 65.2
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 5.0e-179 631.7 543 62.8
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 1.1e-178 630.6 549 63.0
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 1.5e-178 630.2 454 70.0
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.5e-178 629.4 514 64.8
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 9.5e-178 627.5 481 68.2
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 1.2e-177 627.1 516 63.8
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 2.9e-174 615.9 556 59.7
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 7.0e-173 611.3 426 71.4
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 1.6e-172 610.1 462 69.7
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 1.1e-165 587.4 447 65.8
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 5.6e-162 575.1 428 69.9
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 4.3e-146 522.3 503 57.1
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 7.3e-146 521.5 536 55.0
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 9.3e-109 398.3 294 69.7
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 3.9e-107 392.9 261 73.9
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 2.0e-103 380.6 341 58.4
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 1.8e-91 340.9 271 63.8
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 1.2e-87 328.2 309 58.3
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 1.5e-85 321.2 407 43.7
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 1.4e-80 304.7 268 60.4
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 7.7e-79 298.9 428 40.7
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 2.9e-78 297.0 167 82.0
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 6.8e-67 259.2 200 66.5
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 8.9e-67 258.8 509 34.2
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.5e-66 258.1 384 38.8
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 5.6e-61 239.6 147 82.3
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 2.9e-57 227.3 125 81.6
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 1.1e-56 225.3 201 58.2
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 4.6e-55 219.9 125 82.4
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 8.3e-49 199.1 191 54.5
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 2.4e-48 197.6 167 63.5
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 2.8e-44 184.1 290 38.6
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 1.7e-33 148.3 80 85.0
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 2.2e-33 147.9 107 76.6
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 3.3e-29 134.0 221 39.8
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 5.4e-24 116.7 86 62.8
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 2.5e-21 107.8 89 64.0
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 7.3e-21 106.3 182 40.7
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 7.3e-21 106.3 101 61.4
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 9.6e-21 105.9 83 69.9
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 1.6e-20 105.1 114 57.0
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.0e-18 98.2 76 71.1
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 3.4e-18 97.4 53 86.8
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 6.0e-15 86.7 138 44.9
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 7.9e-15 86.3 45 80.0
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 2.3e-14 84.7 93 48.4
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 4.3e-13 80.5 67 71.6
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 6.0e-07 60.1 32 81.2


User provided reference genes

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