Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029977.1 Olea europaea HOM05D005691 ORTHO05D007096 0.0e+00 2467.6 1250 100.0
MSTRG.6644 Avicennia marina HOM05D005691 ORTHO05D007096 0.0e+00 1780.4 1327 68.3
Migut.M00032 Erythranthe guttata HOM05D005691 ORTHO05D007096 0.0e+00 1767.3 1323 68.3
CSS0040753 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 0.0e+00 1720.3 1333 65.8
Nitab4.5_0009877g0010 Nicotiana tabacum HOM05D005691 ORTHO05D007096 0.0e+00 1686.0 1334 65.1
PGSC0003DMG400006150 Solanum tuberosum HOM05D005691 ORTHO05D007096 0.0e+00 1678.3 1335 64.7
Cc00_g04460 Coffea canephora HOM05D005691 ORTHO05D007096 0.0e+00 1671.4 1324 64.2
Nitab4.5_0000441g0080 Nicotiana tabacum HOM05D005691 ORTHO05D007096 0.0e+00 1669.8 1334 64.7
Sopen07g024300 Solanum pennellii HOM05D005691 ORTHO05D007096 0.0e+00 1666.0 1334 64.4
Peaxi162Scf00776g00233 Petunia axillaris HOM05D005691 ORTHO05D007096 0.0e+00 1659.0 1344 64.1
CSS0009966 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 0.0e+00 1651.0 1279 66.0
Lj8A134T75 Lonicera japonica HOM05D005691 ORTHO05D007096 0.0e+00 1649.4 1325 63.8
Actinidia21444 Actinidia chinensis HOM05D005691 ORTHO05D007096 0.0e+00 1649.0 1327 64.2
CAN.G854.9 Capsicum annuum HOM05D005691 ORTHO05D007096 0.0e+00 1649.0 1337 63.3
GSVIVG01030051001 Vitis vinifera HOM05D005691 ORTHO05D007096 0.0e+00 1639.8 1270 65.4
SalBow7G1588 Salvia bowleyana HOM05D005691 ORTHO05D007096 0.0e+00 1625.9 1305 65.7
vmacro09398 Vaccinium macrocarpon HOM05D005691 ORTHO05D007096 0.0e+00 1613.2 1399 60.2
SGA_v2.0_scaffold73G24511 Striga asiatica HOM05D005691 ORTHO05D007096 0.0e+00 1609.7 1229 66.9
Haze_12684 Corylus avellana HOM05D005691 ORTHO05D007096 0.0e+00 1607.8 1323 63.0
QL08p028494 Quercus lobata HOM05D005691 ORTHO05D007096 0.0e+00 1593.6 1333 62.2
ECA240G2675 Erigeron canadensis HOM05D005691 ORTHO05D007096 0.0e+00 1590.9 1306 62.6
Thecc.01G191500 Theobroma cacao HOM05D005691 ORTHO05D007096 0.0e+00 1582.8 1316 61.6
Manes.12G061100 Manihot esculenta HOM05D005691 ORTHO05D007096 0.0e+00 1579.7 1331 61.5
Prupe.3G200800 Prunus persica HOM05D005691 ORTHO05D007096 0.0e+00 1565.4 1329 61.2
Rhsim04G0038700 Rhododendron simsii HOM05D005691 ORTHO05D007096 0.0e+00 1563.5 1472 56.7
Ciclev10014054m.g Citrus clementina HOM05D005691 ORTHO05D007096 0.0e+00 1556.2 1318 61.9
HanXRQChr03g0075241 Helianthus annuus HOM05D005691 ORTHO05D007096 0.0e+00 1555.4 1297 61.4
Hma1.2p1_0133F.1_g061380 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 0.0e+00 1554.3 1242 63.5
Gohir.A07G191000 Gossypium hirsutum HOM05D005691 ORTHO05D007096 0.0e+00 1553.5 1310 60.3
Atru.chr6.3368 Acer truncatum HOM05D005691 ORTHO05D007096 0.0e+00 1551.2 1314 61.5
TWI18G1215 Tripterygium wilfordii HOM05D005691 ORTHO05D007096 0.0e+00 1543.1 1305 60.7
CiPaw.03G279200 Carya illinoinensis HOM05D005691 ORTHO05D007096 0.0e+00 1541.9 1329 60.2
RcHm_v2.0_Chr2g0156551 Rosa chinensis HOM05D005691 ORTHO05D007096 0.0e+00 1540.8 1321 60.1
CANSAT64G0049 Cannabis sativa HOM05D005691 ORTHO05D007096 0.0e+00 1534.2 1325 59.5
FvH4_6g40930 Fragaria vesca HOM05D005691 ORTHO05D007096 0.0e+00 1530.8 1319 59.7
FAN14G0170 Fragaria x ananassa HOM05D005691 ORTHO05D007096 0.0e+00 1526.9 1319 59.5
Potri.002G221300 Populus trichocarpa HOM05D005691 ORTHO05D007096 0.0e+00 1526.9 1324 60.0
FAN09G3499 Fragaria x ananassa HOM05D005691 ORTHO05D007096 0.0e+00 1525.4 1319 59.3
FAN05G1189 Fragaria x ananassa HOM05D005691 ORTHO05D007096 0.0e+00 1520.4 1319 59.1
Nn1g07449 Nelumbo nucifera HOM05D005691 ORTHO05D007096 0.0e+00 1518.4 1324 59.8
MD17G1113600 Malus domestica HOM05D005691 ORTHO05D007096 0.0e+00 1515.0 1328 59.9
Eucgr.A01048 Eucalyptus grandis HOM05D005691 ORTHO05D007096 0.0e+00 1513.8 1335 58.7
AUR62015058 Chenopodium quinoa HOM05D005691 ORTHO05D007096 0.0e+00 1512.3 1336 57.9
FAN02G1659 Fragaria x ananassa HOM05D005691 ORTHO05D007096 0.0e+00 1502.6 1335 58.4
AUR62017514 Chenopodium quinoa HOM05D005691 ORTHO05D007096 0.0e+00 1499.2 1336 57.6
EL10Ac9g22718 Beta vulgaris HOM05D005691 ORTHO05D007096 0.0e+00 1497.6 1335 57.5
LjContig00081g0016683 Lotus japonicus HOM05D005691 ORTHO05D007096 0.0e+00 1496.9 1306 59.3
DCAR_019708 Daucus carota HOM05D005691 ORTHO05D007096 0.0e+00 1494.2 1292 59.1
Sabra02G0169100 Salix brachista HOM05D005691 ORTHO05D007096 0.0e+00 1488.0 1367 57.9
MBI16_g26390_MAGBIO Magnolia biondii HOM05D005691 ORTHO05D007096 0.0e+00 1481.8 1323 58.7
PGR042G3586 Punica granatum HOM05D005691 ORTHO05D007096 0.0e+00 1476.5 1329 58.7
Sc21g0000790 Simmondsia chinensis HOM05D005691 ORTHO05D007096 0.0e+00 1475.7 1326 58.3
arahy.Tifrunner.gnm1.ann1.2CK2M8 Arachis hypogaea HOM05D005691 ORTHO05D007096 0.0e+00 1472.2 1308 58.1
SGA_v2.0_scaffold292G47401 Striga asiatica HOM05D005691 ORTHO05D007096 0.0e+00 1471.1 1293 61.5
Glyma.14G008200 Glycine max HOM05D005691 ORTHO05D007096 0.0e+00 1469.5 1326 57.8
PSO675G5893 Papaver somniferum HOM05D005691 ORTHO05D007096 0.0e+00 1469.5 1338 57.5
Glyma.02G305200 Glycine max HOM05D005691 ORTHO05D007096 0.0e+00 1461.8 1329 57.3
arahy.Tifrunner.gnm1.ann1.5BD1HA Arachis hypogaea HOM05D005691 ORTHO05D007096 0.0e+00 1456.8 1308 57.8
Gorai.001G221100 Gossypium raimondii HOM05D005691 ORTHO05D007096 0.0e+00 1453.3 1195 61.6
Aqoxy4G02218 Aquilegia oxysepala HOM05D005691 ORTHO05D007096 0.0e+00 1450.6 1338 57.1
Gohir.D07G197400 Gossypium hirsutum HOM05D005691 ORTHO05D007096 0.0e+00 1449.1 1195 61.3
Hund01594 Selenicereus undatus HOM05D005691 ORTHO05D007096 0.0e+00 1442.9 1341 56.2
Dinv07866 Davidia involucrata HOM05D005691 ORTHO05D007096 0.0e+00 1441.8 1333 58.1
Medtr5g097260 Medicago truncatula HOM05D005691 ORTHO05D007096 0.0e+00 1439.9 1328 57.1
Psat2g005000 Pisum sativum HOM05D005691 ORTHO05D007096 0.0e+00 1437.9 1330 56.9
Ca_06452_v3 Cicer arietinum L. HOM05D005691 ORTHO05D007096 0.0e+00 1433.7 1320 56.4
SGA_v2.0_scaffold292G47412 Striga asiatica HOM05D005691 ORTHO05D007096 0.0e+00 1431.4 1292 59.4
Lalb_Chr10g0107611 Lupinus albus HOM05D005691 ORTHO05D007096 0.0e+00 1426.8 1331 56.3
Phvul.008G284900 Phaseolus vulgaris HOM05D005691 ORTHO05D007096 0.0e+00 1424.5 1327 56.0
Lsat_1_v5_gn_9_104801 Lactuca sativa HOM05D005691 ORTHO05D007096 0.0e+00 1423.7 1292 57.9
MELO3C024202.2 Cucumis melo HOM05D005691 ORTHO05D007096 0.0e+00 1422.5 1312 57.4
TPR.G1235 Trifolium pratense HOM05D005691 ORTHO05D007096 0.0e+00 1420.6 1328 56.7
VMungo0647G0393 Vigna mungo HOM05D005691 ORTHO05D007096 0.0e+00 1420.6 1327 56.2
ClCG02G002780 Citrullus lanatus HOM05D005691 ORTHO05D007096 0.0e+00 1418.3 1332 56.8
CsaV3_7G002600 Cucumis sativus L. HOM05D005691 ORTHO05D007096 0.0e+00 1407.9 1314 57.1
THA.LOC104815358 Tarenaya hassleriana HOM05D005691 ORTHO05D007096 0.0e+00 1405.6 1316 55.9
Sed0003649 Sechium edule HOM05D005691 ORTHO05D007096 0.0e+00 1403.7 1314 56.8
Thhalv10003521m.g Eutrema salsugineum HOM05D005691 ORTHO05D007096 0.0e+00 1332.4 1309 54.1
AL3G42730 Arabidopsis lyrata HOM05D005691 ORTHO05D007096 0.0e+00 1328.5 1303 53.9
Carub.0003s2665 Capsella rubella HOM05D005691 ORTHO05D007096 0.0e+00 1328.5 1325 53.7
C03p55370 Brassica napus HOM05D005691 ORTHO05D007096 0.0e+00 1313.9 1295 53.8
BcaC01g03178 Brassica carinata HOM05D005691 ORTHO05D007096 0.0e+00 1310.8 1295 53.5
BolC3t17809H Brassica oleracea HOM05D005691 ORTHO05D007096 0.0e+00 1310.8 1295 53.5
BraA03t13590Z Brassica rapa HOM05D005691 ORTHO05D007096 0.0e+00 1308.1 1295 53.9
A03p44570 Brassica napus HOM05D005691 ORTHO05D007096 0.0e+00 1306.2 1295 53.8
ATR1149G135 Amborella trichopoda HOM05D005691 ORTHO05D007096 0.0e+00 1305.8 1317 52.1
Sp3g23610 Schrenkiella parvula HOM05D005691 ORTHO05D007096 0.0e+00 1296.6 1317 52.6
BcaB08g34496 Brassica carinata HOM05D005691 ORTHO05D007096 0.0e+00 1282.7 1305 53.0
BcaB06g26838 Brassica carinata HOM05D005691 ORTHO05D007096 0.0e+00 1280.0 1313 52.2
Os03g0225500 Oryza sativa ssp. japonica HOM05D005691 ORTHO05D007096 0.0e+00 1241.5 1312 50.8
Zm00001eb399630 Zea mays HOM05D005691 ORTHO05D007096 0.0e+00 1226.8 1314 50.4
Solyc07g047860.4 Solanum lycopersicum HOM05D005691 ORTHO05D007096 0.0e+00 1182.5 858 69.0
TAR626G1898 Trochodendron aralioides HOM05D005691 ORTHO05D007096 0.0e+00 1172.9 938 64.6
CARHR103010 Cardamine hirsuta HOM05D005691 ORTHO05D007096 0.0e+00 1164.4 1054 57.7
SEGI_38606 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 0.0e+00 1158.3 1330 47.4
AT2G05120 Arabidopsis thaliana HOM05D005691 ORTHO05D007096 0.0e+00 1137.5 970 59.5
SHI10144 Sapria himalayana HOM05D005691 ORTHO05D007096 0.0e+00 1088.2 1207 49.1
Hma1.2p1_0133F.1_g061370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 0.0e+00 1082.0 911 60.7
unitig_746.g26642 Utricularia gibba HOM05D005691 ORTHO05D007096 1.5e-274 950.3 1276 45.1
BcaC06g35896 Brassica carinata HOM05D005691 ORTHO05D007096 8.8e-267 924.5 1262 44.8
Mapoly0061s0124 Marchantia polymorpha HOM05D005691 ORTHO05D007096 1.8e-264 916.8 1346 40.6
SMO351G0158 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 1.2e-236 824.3 1248 39.5
CDE04G3337 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 7.3e-229 798.5 915 48.0
Pp3c21_14430 Physcomitrium patens HOM05D005691 ORTHO05D007096 4.2e-224 782.7 1271 37.3
AagrBONN_evm.TU.Sc2ySwM_362.2878 Anthoceros agrestis HOM05D005691 ORTHO05D007096 3.3e-221 773.1 1127 40.9
COL.COLO4_09229 Corchorus olitorius HOM05D005691 ORTHO05D007096 3.8e-161 573.5 468 62.2
HPP92_000880 Vanilla planifolia HOM05D005691 ORTHO05D007096 2.3e-158 564.3 588 51.4
COL.COLO4_09230 Corchorus olitorius HOM05D005691 ORTHO05D007096 5.5e-152 543.1 547 53.6
CBR_g39814 Chara braunii HOM05D005691 ORTHO05D007096 1.1e-123 449.1 1097 30.3
CDE04G1592 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 3.0e-105 387.9 322 60.6
Cpa.g.sc211.9 Carica papaya HOM05D005691 ORTHO05D007096 5.8e-101 373.6 320 61.6
HPP92_000881 Vanilla planifolia HOM05D005691 ORTHO05D007096 3.9e-97 360.9 381 52.2
Cpa.g.sc211.12 Carica papaya HOM05D005691 ORTHO05D007096 2.5e-96 358.2 290 61.7
SMO351G0109 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 3.4e-85 321.2 986 28.8
C07p09910 Brassica napus HOM05D005691 ORTHO05D007096 5.3e-78 297.4 261 62.1
Hma1.2p1_1825F.1_g304370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 2.2e-71 275.4 206 66.5
TAR626G0169 Trochodendron aralioides HOM05D005691 ORTHO05D007096 1.8e-65 255.8 213 60.1
Hma1.2p1_0133F.1_g061390 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 4.4e-64 251.1 186 66.7
C07p09950 Brassica napus HOM05D005691 ORTHO05D007096 1.0e-57 229.9 310 42.3
Hma1.2p1_1825F.1_g304360 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 2.5e-51 208.8 150 70.0
BolC7t41441H Brassica oleracea HOM05D005691 ORTHO05D007096 5.7e-48 197.6 301 39.9
C07p09940 Brassica napus HOM05D005691 ORTHO05D007096 1.2e-34 153.3 119 63.9
MCO12G144 Micromonas commoda HOM05D005691 ORTHO05D007096 1.4e-33 149.8 653 26.6
PGR042G0477 Punica granatum HOM05D005691 ORTHO05D007096 1.4e-33 149.8 127 61.4
SalBow7G3724 Salvia bowleyana HOM05D005691 ORTHO05D007096 9.2e-22 110.5 97 52.6
PGR042G0061 Punica granatum HOM05D005691 ORTHO05D007096 1.3e-20 106.7 124 46.8
CSS0045948 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 7.5e-16 90.9 76 64.5
SHI10145 Sapria himalayana HOM05D005691 ORTHO05D007096 5.6e-11 74.7 104 42.3
Hma1.2p1_0133F.1_g061360 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 2.6e-08 65.9 65 60.0


User provided reference genes

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