Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026903.3 Olea europaea HOM05D005984 ORTHO05D007754 2.8e-215 751.9 441 100.0
MSTRG.431 Avicennia marina HOM05D005984 ORTHO05D007754 7.9e-170 600.9 446 73.1
Dinv11718 Davidia involucrata HOM05D005984 ORTHO05D007754 1.0e-164 583.9 438 74.4
Cc11_g02280 Coffea canephora HOM05D005984 ORTHO05D007754 2.2e-164 582.8 446 69.7
Sopen02g003530 Solanum pennellii HOM05D005984 ORTHO05D007754 3.8e-164 582.0 434 71.2
Cpa.g.sc44.38 Carica papaya HOM05D005984 ORTHO05D007754 5.0e-164 581.6 415 71.8
PGSC0003DMG400002324 Solanum tuberosum HOM05D005984 ORTHO05D007754 1.9e-163 579.7 432 71.1
CANSAT56G2432 Cannabis sativa HOM05D005984 ORTHO05D007754 4.2e-163 578.6 437 73.5
CAN.G157.24 Capsicum annuum HOM05D005984 ORTHO05D007754 4.2e-163 578.6 416 72.4
Hma1.2p1_0122F.1_g057600 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 7.2e-163 577.8 418 72.2
Thecc.02G160200 Theobroma cacao HOM05D005984 ORTHO05D007754 2.7e-162 575.9 440 69.3
Prupe.1G347100 Prunus persica HOM05D005984 ORTHO05D007754 1.0e-161 573.9 405 77.3
Sed0006813 Sechium edule HOM05D005984 ORTHO05D007754 1.4e-161 573.5 423 69.7
vmacro08597 Vaccinium macrocarpon HOM05D005984 ORTHO05D007754 1.4e-161 573.5 411 76.4
Actinidia13710 Actinidia chinensis HOM05D005984 ORTHO05D007754 1.8e-161 573.2 424 69.6
Ciclev10031672m.g Citrus clementina HOM05D005984 ORTHO05D007754 3.0e-161 572.4 408 75.5
DCAR_002576 Daucus carota HOM05D005984 ORTHO05D007754 3.9e-161 572.0 411 71.3
PGR044G2022 Punica granatum HOM05D005984 ORTHO05D007754 3.9e-161 572.0 402 72.6
TAR629G1998 Trochodendron aralioides HOM05D005984 ORTHO05D007754 3.9e-161 572.0 414 71.0
ECA246G1868 Erigeron canadensis HOM05D005984 ORTHO05D007754 5.1e-161 571.6 405 77.3
Actinidia38413 Actinidia chinensis HOM05D005984 ORTHO05D007754 1.1e-160 570.5 420 70.2
ClCG09G004540 Citrullus lanatus HOM05D005984 ORTHO05D007754 1.1e-160 570.5 398 73.1
MD13G1005900 Malus domestica HOM05D005984 ORTHO05D007754 1.1e-160 570.5 412 70.9
AL6G34310 Arabidopsis lyrata HOM05D005984 ORTHO05D007754 1.5e-160 570.1 417 75.5
BolC7t44963H Brassica oleracea HOM05D005984 ORTHO05D007754 2.0e-160 569.7 425 69.4
Atru.chr11.1117 Acer truncatum HOM05D005984 ORTHO05D007754 2.5e-160 569.3 422 74.4
SGA_v2.0_scaffold88G27230 Striga asiatica HOM05D005984 ORTHO05D007754 2.5e-160 569.3 413 76.3
VMungo0647G2306 Vigna mungo HOM05D005984 ORTHO05D007754 3.3e-160 568.9 429 69.2
unitig_8.g2892 Utricularia gibba HOM05D005984 ORTHO05D007754 4.3e-160 568.5 439 68.3
C07p44410 Brassica napus HOM05D005984 ORTHO05D007754 5.7e-160 568.2 425 69.2
CsaV3_7G030600 Cucumis sativus L. HOM05D005984 ORTHO05D007754 5.7e-160 568.2 435 67.8
TWI53G1952 Tripterygium wilfordii HOM05D005984 ORTHO05D007754 5.7e-160 568.2 433 68.6
Aa31LG11G2610 Aethionema arabicum HOM05D005984 ORTHO05D007754 7.4e-160 567.8 425 73.4
arahy.Tifrunner.gnm1.ann1.0C6YUW Arachis hypogaea HOM05D005984 ORTHO05D007754 7.4e-160 567.8 433 68.4
Gorai.005G210500 Gossypium raimondii HOM05D005984 ORTHO05D007754 7.4e-160 567.8 438 68.3
GSVIVG01012045001 Vitis vinifera HOM05D005984 ORTHO05D007754 9.7e-160 567.4 414 71.3
Gohir.D02G187800 Gossypium hirsutum HOM05D005984 ORTHO05D007754 1.3e-159 567.0 438 68.0
ATR0618G114 Amborella trichopoda HOM05D005984 ORTHO05D007754 1.7e-159 566.6 417 70.0
A03p46390 Brassica napus HOM05D005984 ORTHO05D007754 2.2e-159 566.2 423 69.3
BraA03t13765Z Brassica rapa HOM05D005984 ORTHO05D007754 2.2e-159 566.2 423 69.3
Lj3g0024041 Lotus japonicus HOM05D005984 ORTHO05D007754 2.2e-159 566.2 428 73.1
Glyma.11G100800 Glycine max HOM05D005984 ORTHO05D007754 2.8e-159 565.8 443 69.1
Potri.007G071300 Populus trichocarpa HOM05D005984 ORTHO05D007754 2.8e-159 565.8 429 69.7
arahy.Tifrunner.gnm1.ann1.B6F48P Arachis hypogaea HOM05D005984 ORTHO05D007754 3.7e-159 565.5 466 64.8
Lj3A850G95 Lonicera japonica HOM05D005984 ORTHO05D007754 3.7e-159 565.5 415 70.8
Sabra07G0060100 Salix brachista HOM05D005984 ORTHO05D007754 4.8e-159 565.1 397 72.8
CSS0012805 Camellia sinensis var. sinensis HOM05D005984 ORTHO05D007754 8.2e-159 564.3 436 67.7
Glyma.12G026900 Glycine max HOM05D005984 ORTHO05D007754 8.2e-159 564.3 405 71.9
Lsat_1_v5_gn_3_35480 Lactuca sativa HOM05D005984 ORTHO05D007754 1.1e-158 563.9 445 71.0
TPR.G32343 Trifolium pratense HOM05D005984 ORTHO05D007754 1.1e-158 563.9 394 74.1
PSO063G6567 Papaver somniferum HOM05D005984 ORTHO05D007754 1.4e-158 563.5 395 72.4
Phvul.011G029800 Phaseolus vulgaris HOM05D005984 ORTHO05D007754 2.4e-158 562.8 441 67.3
Sed0023953 Sechium edule HOM05D005984 ORTHO05D007754 2.4e-158 562.8 436 71.8
PSO782G0234 Papaver somniferum HOM05D005984 ORTHO05D007754 3.1e-158 562.4 429 68.1
RcHm_v2.0_Chr4g0446671 Rosa chinensis HOM05D005984 ORTHO05D007754 3.1e-158 562.4 416 74.8
Thhalv10004338m.g Eutrema salsugineum HOM05D005984 ORTHO05D007754 4.1e-158 562.0 421 69.1
Sp2g24000 Schrenkiella parvula HOM05D005984 ORTHO05D007754 4.1e-158 562.0 422 73.2
MD16G1002000 Malus domestica HOM05D005984 ORTHO05D007754 5.3e-158 561.6 409 75.1
VMungo1127G1047 Vigna mungo HOM05D005984 ORTHO05D007754 5.3e-158 561.6 442 67.4
Zm00001eb271820 Zea mays HOM05D005984 ORTHO05D007754 5.3e-158 561.6 418 69.4
FvH4_4g36890 Fragaria vesca HOM05D005984 ORTHO05D007754 6.9e-158 561.2 441 72.8
Gohir.A03G164600 Gossypium hirsutum HOM05D005984 ORTHO05D007754 6.9e-158 561.2 439 67.7
AT5G23120 Arabidopsis thaliana HOM05D005984 ORTHO05D007754 1.2e-157 560.5 423 68.8
FAN12G1392 Fragaria x ananassa HOM05D005984 ORTHO05D007754 1.2e-157 560.5 438 73.1
THA.LOC104800911 Tarenaya hassleriana HOM05D005984 ORTHO05D007754 1.2e-157 560.5 393 72.8
CARHR190410 Cardamine hirsuta HOM05D005984 ORTHO05D007754 2.0e-157 559.7 426 72.5
Cfa008738 Carpinus fangiana HOM05D005984 ORTHO05D007754 2.6e-157 559.3 422 69.9
Psat7g177360 Pisum sativum HOM05D005984 ORTHO05D007754 2.6e-157 559.3 408 71.8
Medtr4g075040 Medicago truncatula HOM05D005984 ORTHO05D007754 5.9e-157 558.1 416 70.9
Carub.0006s2091 Capsella rubella HOM05D005984 ORTHO05D007754 1.0e-156 557.4 444 66.7
CiPaw.06G060100 Carya illinoinensis HOM05D005984 ORTHO05D007754 1.3e-156 557.0 442 67.9
Lalb_Chr03g0024761 Lupinus albus HOM05D005984 ORTHO05D007754 1.3e-156 557.0 421 73.6
Aqoxy3G04258 Aquilegia oxysepala HOM05D005984 ORTHO05D007754 2.9e-156 555.8 431 67.1
Ca_19021_v3 Cicer arietinum L. HOM05D005984 ORTHO05D007754 3.8e-156 555.4 416 70.4
Solyc02g014150.4 Solanum lycopersicum HOM05D005984 ORTHO05D007754 5.0e-156 555.1 373 76.7
Manes.04G064200 Manihot esculenta HOM05D005984 ORTHO05D007754 6.5e-156 554.7 420 73.3
Duzib052G0297 Durio zibethinus HOM05D005984 ORTHO05D007754 8.5e-156 554.3 401 70.3
SalBow2G1456 Salvia bowleyana HOM05D005984 ORTHO05D007754 8.5e-156 554.3 535 63.0
CDE07G0658 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 1.1e-155 553.9 414 71.7
Eucgr.J00865 Eucalyptus grandis HOM05D005984 ORTHO05D007754 1.1e-155 553.9 397 75.8
COL.COLO4_19602 Corchorus olitorius HOM05D005984 ORTHO05D007754 1.9e-155 553.1 483 63.4
HanXRQChr06g0171511 Helianthus annuus HOM05D005984 ORTHO05D007754 1.2e-154 550.4 382 78.8
Manes.11G108100 Manihot esculenta HOM05D005984 ORTHO05D007754 1.2e-154 550.4 419 74.2
FAN07G1379 Fragaria x ananassa HOM05D005984 ORTHO05D007754 7.9e-154 547.7 442 71.0
HanXRQChr17g0544921 Helianthus annuus HOM05D005984 ORTHO05D007754 7.9e-154 547.7 380 78.2
MELO3C023596.2 Cucumis melo HOM05D005984 ORTHO05D007754 1.8e-153 546.6 370 74.3
AUR62017696 Chenopodium quinoa HOM05D005984 ORTHO05D007754 5.1e-153 545.0 364 79.7
AUR62015232 Chenopodium quinoa HOM05D005984 ORTHO05D007754 6.7e-153 544.7 364 79.7
AUR62015234 Chenopodium quinoa HOM05D005984 ORTHO05D007754 6.7e-153 544.7 364 79.7
Hund08579 Selenicereus undatus HOM05D005984 ORTHO05D007754 2.0e-152 543.1 443 64.8
Nn3g18651 Nelumbo nucifera HOM05D005984 ORTHO05D007754 4.4e-152 542.0 373 73.7
Os06g0729650 Oryza sativa ssp. japonica HOM05D005984 ORTHO05D007754 4.4e-152 542.0 416 68.3
Migut.E00699 Erythranthe guttata HOM05D005984 ORTHO05D007754 8.2e-151 537.7 439 66.7
EL10Ac9g22946 Beta vulgaris HOM05D005984 ORTHO05D007754 1.4e-150 537.0 431 65.7
Haze_11755 Corylus avellana HOM05D005984 ORTHO05D007754 1.4e-150 537.0 432 67.1
HPP92_012878 Vanilla planifolia HOM05D005984 ORTHO05D007754 3.1e-150 535.8 429 66.4
Sc10g0006780 Simmondsia chinensis HOM05D005984 ORTHO05D007754 4.1e-150 535.4 358 76.0
Rhsim04G0167300 Rhododendron simsii HOM05D005984 ORTHO05D007754 2.9e-148 529.3 408 68.6
Nitab4.5_0000133g0050 Nicotiana tabacum HOM05D005984 ORTHO05D007754 4.7e-146 521.9 565 57.2
QL03p045967 Quercus lobata HOM05D005984 ORTHO05D007754 3.3e-144 515.8 496 57.7
Pp3c9_10350 Physcomitrium patens HOM05D005984 ORTHO05D007754 2.0e-141 506.5 405 67.9
Pp3c15_7930 Physcomitrium patens HOM05D005984 ORTHO05D007754 1.0e-140 504.2 399 67.9
Nitab4.5_0006277g0020 Nicotiana tabacum HOM05D005984 ORTHO05D007754 1.3e-140 503.8 599 53.6
Ah.01g001560 Amaranthus hybridus HOM05D005984 ORTHO05D007754 1.1e-139 500.7 390 66.9
SMO347G0352 Selaginella moellendorffii HOM05D005984 ORTHO05D007754 1.9e-139 500.0 412 63.1
Mapoly0020s0149 Marchantia polymorpha HOM05D005984 ORTHO05D007754 3.8e-132 475.7 403 58.6
Peaxi162Scf00363g00317 Petunia axillaris HOM05D005984 ORTHO05D007754 5.0e-132 475.3 486 59.3
CDE04G0799 Ceratophyllum demersum HOM05D005984 ORTHO05D007754 4.7e-130 468.8 435 63.7
CBR_g11122 Chara braunii HOM05D005984 ORTHO05D007754 1.2e-117 427.6 361 64.3
AagrBONN_evm.TU.Sc2ySwM_369.365 Anthoceros agrestis HOM05D005984 ORTHO05D007754 3.1e-113 412.9 350 65.4
FAN17G0887 Fragaria x ananassa HOM05D005984 ORTHO05D007754 2.4e-110 403.3 464 56.2
Dinv01185 Davidia involucrata HOM05D005984 ORTHO05D007754 1.7e-103 380.6 240 79.6
MCO05G498 Micromonas commoda HOM05D005984 ORTHO05D007754 3.7e-103 379.4 413 54.0
Hma1.2p1_0122F.1_g057590 Hydrangea macrophylla HOM05D005984 ORTHO05D007754 8.6e-100 368.2 209 86.1
Cre06.g273700 Chlamydomonas reinhardtii HOM05D005984 ORTHO05D007754 2.5e-99 366.7 425 52.0
PRCOL_00000217 Prasinoderma coloniale HOM05D005984 ORTHO05D007754 1.2e-77 294.7 298 56.7
MD15G1106700 Malus domestica HOM05D005984 ORTHO05D007754 1.2e-56 224.9 114 92.1
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 3.4e-56 223.4 362 42.3
C09p07860 Brassica napus HOM05D005984 ORTHO05D007754 9.0e-49 198.7 179 60.9
SEGI_34707 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 1.1e-43 181.8 122 73.8
MD00G1043400 Malus domestica HOM05D005984 ORTHO05D007754 1.1e-35 155.2 148 56.8
BcaB04g19886 Brassica carinata HOM05D005984 ORTHO05D007754 4.1e-33 146.7 248 41.1
HanXRQChr10g0318441 Helianthus annuus HOM05D005984 ORTHO05D007754 5.0e-31 139.8 69 92.8
AUR62024854 Chenopodium quinoa HOM05D005984 ORTHO05D007754 2.3e-28 131.0 73 89.0
arahy.Tifrunner.gnm1.ann1.25R2K9 Arachis hypogaea HOM05D005984 ORTHO05D014444 8.2e-26 122.5 80 73.8
arahy.Tifrunner.gnm1.ann1.B9R6EW Arachis hypogaea HOM05D005984 ORTHO05D014444 9.1e-25 119.0 78 73.1
SEGI_27749 Sequoiadendron giganteum HOM05D005984 ORTHO05D007754 8.8e-20 102.4 53 84.9
C09p07870 Brassica napus HOM05D005984 ORTHO05D042888 2.8e-18 97.4 103 53.4
MBI03_g15323_MAGBIO Magnolia biondii HOM05D002934 ORTHO05D003937 2.9e-15 87.4 43 93.0
BolC9t53702H Brassica oleracea HOM05D005984 ORTHO05D042888 3.4e-11 73.9 61 63.9
Glyma.01G000174 Glycine max HOM05D036214 ORTHO05D007754 9.8e-11 72.4 43 79.1
Glyma.06G237300 Glycine max HOM05D005984 ORTHO05D007754 3.7e-10 70.5 70 57.1
Pp3c24_8290 Physcomitrium patens HOM05D013586 ORTHO05D011470 1.8e-09 68.2 38 76.3
SGA_v2.0_scaffold57G20111 Striga asiatica HOM05D005984 ORTHO05D402503 1.7e-07 61.6 39 71.8
Zm00001eb227280 Zea mays HOM05D005984 ORTHO05D007754 2.3e-07 61.2 99 39.4


User provided reference genes

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