Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026584.1 Olea europaea HOM05D003508 ORTHO05D004579 6.0e-163 577.4 284 100.0
Hma1.2p1_0356F.1_g134090 Hydrangea macrophylla HOM05D003508 ORTHO05D004579 9.7e-137 490.3 282 84.8
Cc02_g09750 Coffea canephora HOM05D003508 ORTHO05D004579 8.2e-136 487.3 284 82.0
MSTRG.27535 Avicennia marina HOM05D003508 ORTHO05D004579 1.1e-135 486.9 284 83.8
Dinv09607 Davidia involucrata HOM05D003508 ORTHO05D004579 1.4e-135 486.5 284 84.5
CSS0009164 Camellia sinensis var. sinensis HOM05D003508 ORTHO05D004579 1.8e-135 486.1 284 82.7
CSS0049709 Camellia sinensis var. sinensis HOM05D003508 ORTHO05D004579 9.1e-135 483.8 284 82.4
CAN.G645.2 Capsicum annuum HOM05D003508 ORTHO05D004579 1.5e-134 483.0 287 80.5
CiPaw.13G040400 Carya illinoinensis HOM05D003508 ORTHO05D004579 1.7e-133 479.6 284 81.0
Nitab4.5_0001437g0070 Nicotiana tabacum HOM05D003508 ORTHO05D004579 2.9e-133 478.8 284 81.0
Nitab4.5_0000691g0130 Nicotiana tabacum HOM05D003508 ORTHO05D004579 8.5e-133 477.2 284 82.0
Actinidia06698 Actinidia chinensis HOM05D003508 ORTHO05D004579 2.5e-132 475.7 284 81.0
CANSAT56G3087 Cannabis sativa HOM05D003508 ORTHO05D004579 3.2e-132 475.3 284 80.3
Actinidia34720 Actinidia chinensis HOM05D003508 ORTHO05D004579 5.5e-132 474.6 284 82.0
Migut.F00911 Erythranthe guttata HOM05D003508 ORTHO05D004579 9.4e-132 473.8 284 82.4
SalBow6G1879 Salvia bowleyana HOM05D003508 ORTHO05D004579 9.4e-132 473.8 284 81.7
Peaxi162Scf00519g00710 Petunia axillaris HOM05D003508 ORTHO05D004579 1.6e-131 473.0 287 80.1
Cfa010322 Carpinus fangiana HOM05D003508 ORTHO05D004579 2.1e-131 472.6 284 79.9
Lj3A928T54 Lonicera japonica HOM05D003508 ORTHO05D004579 3.6e-131 471.9 284 81.7
DCAR_006338 Daucus carota HOM05D003508 ORTHO05D004579 1.0e-130 470.3 284 81.3
PGSC0003DMG400023978 Solanum tuberosum HOM05D003508 ORTHO05D004579 1.0e-130 470.3 284 80.3
Sopen04g004800 Solanum pennellii HOM05D003508 ORTHO05D004579 1.8e-130 469.5 284 79.6
GSVIVG01011287001 Vitis vinifera HOM05D003508 ORTHO05D004579 1.8e-130 469.5 284 80.3
Haze_03293 Corylus avellana HOM05D003508 ORTHO05D004579 2.3e-130 469.2 304 76.0
Eucgr.J00991 Eucalyptus grandis HOM05D003508 ORTHO05D004579 1.1e-129 466.8 284 79.6
Sopen11g002940 Solanum pennellii HOM05D003508 ORTHO05D004579 2.0e-129 466.1 284 79.2
Actinidia36696 Actinidia chinensis HOM05D003508 ORTHO05D004579 2.6e-129 465.7 284 80.6
Solyc11g007020.2 Solanum lycopersicum HOM05D003508 ORTHO05D004579 2.6e-129 465.7 284 78.9
QL04p046077 Quercus lobata HOM05D003508 ORTHO05D004579 4.4e-129 464.9 283 79.2
Duzib106G0726 Durio zibethinus HOM05D003508 ORTHO05D004579 7.4e-129 464.2 284 79.6
HanXRQChr11g0342191 Helianthus annuus HOM05D003508 ORTHO05D004579 9.7e-129 463.8 286 79.4
Manes.07G087500 Manihot esculenta HOM05D003508 ORTHO05D004579 2.8e-128 462.2 284 79.9
Thecc.10G106000 Theobroma cacao HOM05D003508 ORTHO05D004579 3.7e-128 461.8 284 79.6
ECA238G0717 Erigeron canadensis HOM05D003508 ORTHO05D004579 8.2e-128 460.7 284 79.2
Lalb_Chr02g0146341 Lupinus albus HOM05D003508 ORTHO05D004579 8.2e-128 460.7 284 80.3
arahy.Tifrunner.gnm1.ann1.Y4RU6H Arachis hypogaea HOM05D003508 ORTHO05D004579 1.1e-127 460.3 285 78.6
Haze_01394 Corylus avellana HOM05D003508 ORTHO05D004579 1.1e-127 460.3 297 75.4
TPR.G2474 Trifolium pratense HOM05D003508 ORTHO05D004579 1.4e-127 459.9 284 78.5
PGR044G1695 Punica granatum HOM05D003508 ORTHO05D004579 2.4e-127 459.1 284 78.2
Hund14639 Selenicereus undatus HOM05D003508 ORTHO05D004579 2.4e-127 459.1 284 77.1
Lalb_Chr21g0309221 Lupinus albus HOM05D003508 ORTHO05D004579 5.3e-127 458.0 284 79.6
Lj5g0024073 Lotus japonicus HOM05D003508 ORTHO05D004579 7.0e-127 457.6 282 78.7
Potri.010G237900 Populus trichocarpa HOM05D003508 ORTHO05D004579 9.1e-127 457.2 284 79.9
VMungo0720G2493 Vigna mungo HOM05D003508 ORTHO05D004579 9.1e-127 457.2 282 78.7
Potri.008G021100 Populus trichocarpa HOM05D003508 ORTHO05D004579 2.6e-126 455.7 284 79.9
TAR633G0880 Trochodendron aralioides HOM05D003508 ORTHO05D004579 2.6e-126 455.7 284 78.9
Glyma.10G279800 Glycine max HOM05D003508 ORTHO05D004579 5.9e-126 454.5 284 78.5
Aqoxy4G02791 Aquilegia oxysepala HOM05D003508 ORTHO05D004579 7.7e-126 454.1 284 77.8
Manes.10G058800 Manihot esculenta HOM05D003508 ORTHO05D004579 1.3e-125 453.4 284 78.2
Lalb_Chr06g0166461 Lupinus albus HOM05D003508 ORTHO05D004579 2.2e-125 452.6 284 78.5
Phvul.007G021200 Phaseolus vulgaris HOM05D003508 ORTHO05D004579 2.2e-125 452.6 284 77.5
Medtr1g112230 Medicago truncatula HOM05D003508 ORTHO05D004579 2.9e-125 452.2 284 77.8
Sabra08G0014400 Salix brachista HOM05D003508 ORTHO05D004579 2.9e-125 452.2 284 79.2
Glyma.20G109900 Glycine max HOM05D003508 ORTHO05D004579 3.8e-125 451.8 284 77.8
MD07G1064100 Malus domestica HOM05D003508 ORTHO05D004579 8.5e-125 450.7 284 77.5
Lsat_1_v5_gn_0_7601 Lactuca sativa HOM05D003508 ORTHO05D004579 1.1e-124 450.3 284 78.5
Cpa.g.sc183.13 Carica papaya HOM05D003508 ORTHO05D004579 2.5e-124 449.1 285 77.9
AUR62027288 Chenopodium quinoa HOM05D003508 ORTHO05D004579 3.2e-124 448.7 284 75.7
TWI63G0607 Tripterygium wilfordii HOM05D003508 ORTHO05D004579 4.2e-124 448.4 284 77.5
AUR62007446 Chenopodium quinoa HOM05D003508 ORTHO05D004579 5.5e-124 448.0 284 75.7
TWI38G0289 Tripterygium wilfordii HOM05D003508 ORTHO05D004579 1.2e-123 446.8 284 77.5
Gohir.A13G010700 Gossypium hirsutum HOM05D003508 ORTHO05D004579 1.6e-123 446.4 284 77.8
unitig_736.g22527 Utricularia gibba HOM05D003508 ORTHO05D004579 1.6e-123 446.4 284 77.1
EL10Ac5g12977 Beta vulgaris HOM05D003508 ORTHO05D004579 2.1e-123 446.0 284 75.7
FAN01G1243 Fragaria x ananassa HOM05D003508 ORTHO05D004579 2.1e-123 446.0 290 75.9
FAN06G4590 Fragaria x ananassa HOM05D003508 ORTHO05D004579 2.1e-123 446.0 290 75.9
FAN10G3478 Fragaria x ananassa HOM05D003508 ORTHO05D004579 2.1e-123 446.0 290 75.9
MD02G1256300 Malus domestica HOM05D003508 ORTHO05D004579 2.1e-123 446.0 284 76.4
PSO339G4868 Papaver somniferum HOM05D003508 ORTHO05D004579 2.7e-123 445.7 284 77.5
C08p29490 Brassica napus HOM05D003508 ORTHO05D004579 4.7e-123 444.9 284 77.1
BolC8t50554H Brassica oleracea HOM05D003508 ORTHO05D004579 8.0e-123 444.1 284 77.1
Hund11567 Selenicereus undatus HOM05D003508 ORTHO05D004579 8.0e-123 444.1 284 74.6
arahy.Tifrunner.gnm1.ann1.Q6BHJ0 Arachis hypogaea HOM05D003508 ORTHO05D004579 1.4e-122 443.4 326 69.3
PSO384G2067 Papaver somniferum HOM05D003508 ORTHO05D004579 1.8e-122 443.0 284 77.1
Ciclev10015368m.g Citrus clementina HOM05D003508 ORTHO05D004579 2.3e-122 442.6 283 77.4
MBI16_g39317_MAGBIO Magnolia biondii HOM05D003508 ORTHO05D004579 2.3e-122 442.6 286 73.1
vmacro10305 Vaccinium macrocarpon HOM05D003508 ORTHO05D004579 2.3e-122 442.6 284 76.1
A09p47250 Brassica napus HOM05D003508 ORTHO05D004579 3.0e-122 442.2 284 76.4
BraA09t40187Z Brassica rapa HOM05D003508 ORTHO05D004579 3.0e-122 442.2 284 76.4
PGSC0003DMG400016014 Solanum tuberosum HOM05D003508 ORTHO05D004579 3.0e-122 442.2 284 75.4
MELO3C012357.2 Cucumis melo HOM05D003508 ORTHO05D004579 4.0e-122 441.8 283 77.4
Nitab4.5_0003927g0020 Nicotiana tabacum HOM05D003508 ORTHO05D004579 4.0e-122 441.8 282 77.7
CSS0018426 Camellia sinensis var. sinensis HOM05D003508 ORTHO05D004579 5.2e-122 441.4 282 76.2
Gorai.013G012400 Gossypium raimondii HOM05D003508 ORTHO05D004579 5.2e-122 441.4 284 76.8
BcaB02g08480 Brassica carinata HOM05D003508 ORTHO05D004579 6.7e-122 441.0 284 76.8
BcaC02g09078 Brassica carinata HOM05D003508 ORTHO05D004579 6.7e-122 441.0 284 76.8
C04p38200 Brassica napus HOM05D003508 ORTHO05D004579 6.7e-122 441.0 284 76.8
BolC4t25395H Brassica oleracea HOM05D003508 ORTHO05D004579 6.7e-122 441.0 284 76.8
Gohir.D13G011400 Gossypium hirsutum HOM05D003508 ORTHO05D004579 6.7e-122 441.0 284 77.1
Sed0023449 Sechium edule HOM05D003508 ORTHO05D004579 6.7e-122 441.0 283 76.3
Rhsim09G0142500 Rhododendron simsii HOM05D003508 ORTHO05D004579 8.8e-122 440.7 284 75.7
A04p05510 Brassica napus HOM05D003508 ORTHO05D004579 1.1e-121 440.3 284 76.4
BraA04t16251Z Brassica rapa HOM05D003508 ORTHO05D004579 1.1e-121 440.3 284 76.4
AT3G54250 Arabidopsis thaliana HOM05D003508 ORTHO05D004579 1.5e-121 439.9 284 75.7
Sp5g08150 Schrenkiella parvula HOM05D003508 ORTHO05D004579 1.5e-121 439.9 284 76.1
CARHR164170 Cardamine hirsuta HOM05D003508 ORTHO05D004579 2.6e-121 439.1 284 76.1
Thhalv10010411m.g Eutrema salsugineum HOM05D003508 ORTHO05D004579 2.6e-121 439.1 284 76.8
Prupe.2G078900 Prunus persica HOM05D003508 ORTHO05D004579 4.4e-121 438.3 284 74.6
Thhalv10023484m.g Eutrema salsugineum HOM05D003508 ORTHO05D004579 7.5e-121 437.6 284 76.1
AL5G35290 Arabidopsis lyrata HOM05D003508 ORTHO05D004579 3.7e-120 435.3 284 75.0
Carub.0005s2084 Capsella rubella HOM05D003508 ORTHO05D004579 8.2e-120 434.1 284 75.0
Peaxi162Scf00173g00046 Petunia axillaris HOM05D003508 ORTHO05D004579 8.2e-120 434.1 284 75.0
Sc06g0002320 Simmondsia chinensis HOM05D003508 ORTHO05D004579 2.4e-119 432.6 284 73.6
RcHm_v2.0_Chr1g0332421 Rosa chinensis HOM05D003508 ORTHO05D004579 3.1e-119 432.2 284 75.7
THA.LOC104811335 Tarenaya hassleriana HOM05D003508 ORTHO05D004579 1.3e-117 426.8 283 73.1
FvH4_7g05610 Fragaria vesca HOM05D003508 ORTHO05D004579 3.8e-117 425.2 316 68.7
HPP92_006808 Vanilla planifolia HOM05D003508 ORTHO05D004579 6.5e-117 424.5 284 71.1
Nn6g34927 Nelumbo nucifera HOM05D003508 ORTHO05D004579 2.5e-116 422.5 283 72.8
Rhsim03G0099000 Rhododendron simsii HOM05D003508 ORTHO05D004579 4.7e-115 418.3 323 69.0
Zm00001eb056620 Zea mays HOM05D003508 ORTHO05D004579 6.1e-115 417.9 283 72.8
Zm00001eb257840 Zea mays HOM05D003508 ORTHO05D004579 2.3e-114 416.0 283 72.8
Nitab4.5_0005622g0070 Nicotiana tabacum HOM05D003508 ORTHO05D004579 5.2e-114 414.8 292 71.2
THA.LOC104824218 Tarenaya hassleriana HOM05D003508 ORTHO05D004579 1.2e-113 413.7 284 70.8
Os02g0109100 Oryza sativa ssp. japonica HOM05D003508 ORTHO05D004579 1.3e-112 410.2 283 71.4
ClCG05G021710 Citrullus lanatus HOM05D003508 ORTHO05D004579 2.8e-112 409.1 283 72.8
Lsat_1_v5_gn_2_104600 Lactuca sativa HOM05D003508 ORTHO05D004579 1.4e-111 406.8 284 72.2
COL.COLO4_24552 Corchorus olitorius HOM05D003508 ORTHO05D004579 3.1e-111 405.6 284 71.5
Carub.0004s2070 Capsella rubella HOM05D003508 ORTHO05D004579 1.6e-110 403.3 284 70.4
FAN03G1980 Fragaria x ananassa HOM05D003508 ORTHO05D004579 4.5e-110 401.7 310 67.1
AT2G38700 Arabidopsis thaliana HOM05D003508 ORTHO05D004579 1.3e-109 400.2 284 69.7
AL4G36000 Arabidopsis lyrata HOM05D003508 ORTHO05D004579 3.8e-109 398.7 284 69.4
Aa31sc79G100 Aethionema arabicum HOM05D003508 ORTHO05D004579 5.0e-109 398.3 284 69.4
CARHR133390 Cardamine hirsuta HOM05D003508 ORTHO05D004579 2.5e-108 396.0 284 68.7
Eucgr.G02693 Eucalyptus grandis HOM05D003508 ORTHO05D004579 4.7e-107 391.7 285 64.9
Aa31sc26G40 Aethionema arabicum HOM05D003508 ORTHO05D004579 8.0e-107 391.0 284 69.0
Sp4g21060 Schrenkiella parvula HOM05D003508 ORTHO05D004579 1.0e-106 390.6 284 68.3
ATR0081G016 Amborella trichopoda HOM05D003508 ORTHO05D004579 4.0e-106 388.7 284 68.3
SGA_v2.0_scaffold7G04100 Striga asiatica HOM05D003508 ORTHO05D004579 2.7e-102 375.9 285 70.2
Ah.02g117270 Amaranthus hybridus HOM05D003508 ORTHO05D004579 5.9e-102 374.8 284 65.8
Oeu025589.3 Olea europaea HOM05D003508 ORTHO05D004579 1.1e-100 370.5 221 80.1
SGA_v2.0_scaffold62G21342 Striga asiatica HOM05D003508 ORTHO05D004579 9.5e-100 367.5 217 84.3
MBI17_g42676_MAGBIO Magnolia biondii HOM05D003508 ORTHO05D004579 4.7e-99 365.2 283 64.0
Psat6g231280 Pisum sativum HOM05D003508 ORTHO05D004579 2.0e-97 359.8 285 66.0
CsaV3_5G035560 Cucumis sativus L. HOM05D003508 ORTHO05D004579 5.4e-95 351.7 283 66.4
Pp3c5_15100 Physcomitrium patens HOM05D003508 ORTHO05D004579 1.2e-94 350.5 284 59.9
Pp3c6_12700 Physcomitrium patens HOM05D003508 ORTHO05D004579 2.0e-94 349.7 282 59.6
Ca_25671_v3 Cicer arietinum L. HOM05D003508 ORTHO05D004579 1.1e-92 344.0 223 74.9
Mapoly0007s0128 Marchantia polymorpha HOM05D003508 ORTHO05D004579 3.3e-92 342.4 283 60.8
AagrBONN_evm.TU.Sc2ySwM_117.3316 Anthoceros agrestis HOM05D003508 ORTHO05D004579 2.8e-91 339.3 283 61.1
SHI21271 Sapria himalayana HOM05D003508 ORTHO05D004579 7.0e-87 324.7 283 59.7
Thhalv10016888m.g Eutrema salsugineum HOM05D003508 ORTHO05D004579 1.3e-85 320.5 202 78.2
SMO203G0120 Selaginella moellendorffii HOM05D003508 ORTHO05D004579 7.5e-81 304.7 267 58.4
CBR_g26358 Chara braunii HOM05D003508 ORTHO05D004579 2.1e-78 296.6 299 53.8
Rhsim03G0099400 Rhododendron simsii HOM05D003508 ORTHO05D004579 4.6e-78 295.4 269 60.2
Dinv11847 Davidia involucrata HOM05D003508 ORTHO05D004579 1.0e-77 294.3 182 82.4
CDE04G2729 Ceratophyllum demersum HOM05D003508 ORTHO05D004579 1.7e-77 293.5 206 68.0
CsaV3_7G016180 Cucumis sativus L. HOM05D003508 ORTHO05D004579 5.8e-73 278.5 261 59.8
Atru.chr12.1012 Acer truncatum HOM05D003508 ORTHO05D004579 9.9e-73 277.7 169 82.2
Sabra10G0186100 Salix brachista HOM05D003508 ORTHO05D004579 1.3e-72 277.3 172 80.2
Actinidia18595 Actinidia chinensis HOM05D003508 ORTHO05D004579 1.7e-72 276.9 212 66.5
CiPaw.14G033200 Carya illinoinensis HOM05D003508 ORTHO05D004579 1.4e-71 273.9 165 81.8
Lj2C31T21 Lonicera japonica HOM05D003508 ORTHO05D004579 3.5e-54 216.1 148 72.3
TAR636G1619 Trochodendron aralioides HOM05D003508 ORTHO05D004579 1.5e-52 210.7 286 44.4
Cfa022308 Carpinus fangiana HOM05D003508 ORTHO05D004579 4.6e-46 189.1 185 53.0
Haze_26564 Corylus avellana HOM05D003508 ORTHO05D004579 9.3e-39 164.9 176 50.0
BcaNung06364 Brassica carinata HOM05D003508 ORTHO05D004579 3.3e-36 156.4 92 85.9
PGSC0003DMG400011919 Solanum tuberosum HOM05D003508 ORTHO05D004579 2.8e-35 153.3 92 81.5
QL04p041546 Quercus lobata HOM05D003508 ORTHO05D004579 2.0e-33 147.1 95 80.0
Duzib128G1625 Durio zibethinus HOM05D003508 ORTHO05D004579 2.4e-26 123.6 75 74.7
SMO203G0126 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 2.0e-25 120.6 92 66.3
Gorai.003G053700 Gossypium raimondii HOM05D003508 ORTHO05D017053 9.4e-23 111.7 63 82.5
Gorai.008G061300 Gossypium raimondii HOM05D003508 ORTHO05D017053 3.6e-22 109.8 88 63.6
Gohir.D06G044601 Gossypium hirsutum HOM05D003508 ORTHO05D006303 4.6e-22 109.4 63 81.0
Gohir.D06G067600 Gossypium hirsutum HOM05D003508 ORTHO05D006303 6.1e-22 109.0 63 81.0
Gohir.D07G221800 Gossypium hirsutum HOM05D003508 ORTHO05D017053 1.4e-21 107.8 73 72.6
Gorai.001G156500 Gossypium raimondii HOM05D003508 ORTHO05D017053 1.4e-21 107.8 73 72.6
Gohir.D11G205701 Gossypium hirsutum HOM05D003508 ORTHO05D017053 3.9e-21 106.3 67 77.6
Peaxi162Scf00173g00513 Petunia axillaris HOM05D003508 ORTHO05D004579 1.5e-20 104.4 67 71.6
Gohir.D10G141300 Gossypium hirsutum HOM05D003508 ORTHO05D017053 5.7e-20 102.4 63 77.8
SMO197G0052 Selaginella moellendorffii HOM05D003508 ORTHO05D004579 5.7e-20 102.4 140 47.1
Lsat_1_v5_gn_3_135760 Lactuca sativa HOM05D000041 ORTHO05D000452 7.4e-20 102.1 84 60.7
Nitab4.5_0000561g0090 Nicotiana tabacum HOM05D003508 ORTHO05D017053 2.6e-12 77.0 57 61.4
Gohir.D05G325100 Gossypium hirsutum HOM05D003508 ORTHO05D010805 3.1e-10 70.1 36 88.9
Gorai.009G349300 Gossypium raimondii HOM05D003508 ORTHO05D010805 3.1e-10 70.1 36 88.9
Gohir.D01G171250 Gossypium hirsutum HOM05D003508 ORTHO05D017053 5.3e-10 69.3 38 84.2
Gohir.D10G176800 Gossypium hirsutum HOM05D003508 ORTHO05D010805 9.1e-10 68.6 36 86.1
Os02g0107200 Oryza sativa ssp. japonica HOM05D003508 ORTHO05D004579 2.6e-09 67.0 36 83.3
Gorai.011G067100 Gossypium raimondii HOM05D005267 ORTHO05D006303 5.9e-09 65.9 36 80.6
Gohir.D10G063000 Gossypium hirsutum HOM05D003508 ORTHO05D017053 1.0e-08 65.1 38 76.3
Sc09g0005390 Simmondsia chinensis HOM05D003508 ORTHO05D389535 1.1e-07 61.6 50 62.0


User provided reference genes

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