Gene: Lsat_1_v5_gn_0_7601
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_0_7601
- Transcript Identifier Lsat_1_v5_gn_0_7601.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_9 : 53216836-53219475 : positive
Gene Family Information
- ID HOM05D003508
- #Genes/#Species 194/97
- Phylogenetic origin
- ID ORTHO05D004579
- #Genes/#Species 176/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_0_7601.v5
- pacid 38926416
Descriptions
- Description K01597 - diphosphomevalonate decarboxylase (MVD, mvaD)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019287 | IEA | InterPro | isopentenyl diphosphate biosynthetic process, mevalonate pathway | |
| GO:0008299 | IEA | InterPro | isoprenoid biosynthetic process | |
| GO:0008610 | ISO | PLAZA Integrative Orthology | lipid biosynthetic process | AT2G38700 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004163 | IEA | InterPro | diphosphomevalonate decarboxylase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016831 | IEA | InterPro | carboxy-lyase activity | |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT2G38700 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT2G38700 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IEA | InterPro | cytosol | |
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT2G38700 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR029765 | Diphosphomevalonate decarboxylase |
| IPR041431 | Mvd1, C-terminal |
| IPR006204 | GHMP kinase N-terminal domain |
| IPR036554 | GHMP kinase, C-terminal domain superfamily |
| IPR005935 | Diphosphomevalonate/phosphomevalonate decarboxylase |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| Mapman id | Description |
|---|---|
| 9.1.1.6 | Secondary metabolism.terpenoids.mevalonate pathway.mevalonate diphosphate decarboxylase |