Gene: Pp3c6_12700

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c6_12700
  • Transcript Identifier Pp3c6_12700V3.3
  • Gene Type Coding gene
  • Location Chr06 : 8120317-8122987 : negative

Gene Family Information

  • ID HOM05D003508
  • #Genes/#Species 194/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c6_12700V3.3
  • pacid 32977900
  • alias Pp1s177_33V6
  • alias Phypa_107613
  • alias Phpat.006G046100
  • uniprot A0A2K1KFE7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016126
IEA
GOA Databasesterol biosynthetic process
GO:0008610
ISO
PLAZA Integrative Orthologylipid biosynthetic process AT2G38700
GO:0019287
IBA
IEA
GOA Databaseisopentenyl diphosphate biosynthetic process, mevalonate pathway
GO:0019287
IEA
InterProisopentenyl diphosphate biosynthetic process, mevalonate pathway
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0006694
IEA
GOA Databasesteroid biosynthetic process
GO:0006629
IEA
GOA Databaselipid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT2G38700
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT2G38700
GO:0004163
IBA
IEA
GOA Databasediphosphomevalonate decarboxylase activity
GO:0004163
IEA
InterProdiphosphomevalonate decarboxylase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity
GO:0016831
IEA
InterProcarboxy-lyase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016829
IEA
GOA Databaselyase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT2G38700
GO:0005829
IBA
IEA
GOA Databasecytosol
GO:0005829
IEA
InterProcytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041431 Mvd1, C-terminal
IPR029765 Diphosphomevalonate decarboxylase
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR006204 GHMP kinase N-terminal domain
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase
IPR036554 GHMP kinase, C-terminal domain superfamily
Mapman id Description
9.1.1.6 Secondary metabolism.terpenoids.mevalonate pathway.mevalonate diphosphate decarboxylase