Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 1.2e-197 693.0 338 100.0
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 1.2e-130 470.3 323 74.6
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 6.1e-130 468.0 330 72.4
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 1.0e-129 467.2 330 73.3
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 1.8e-129 466.5 324 73.5
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 3.0e-129 465.7 324 73.8
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 5.2e-129 464.9 324 73.8
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 6.8e-129 464.5 322 73.3
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 8.8e-129 464.2 323 73.4
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 8.8e-129 464.2 323 73.4
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 1.2e-128 463.8 331 72.8
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 2.0e-128 463.0 328 72.3
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 2.0e-128 463.0 323 73.4
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 5.7e-128 461.5 323 73.4
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 9.8e-128 460.7 324 71.9
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 1.3e-127 460.3 332 72.3
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.2e-127 459.5 324 71.9
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 2.8e-127 459.1 324 72.2
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 4.9e-127 458.4 324 72.2
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 8.3e-127 457.6 324 71.6
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 8.3e-127 457.6 324 72.2
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.1e-126 457.2 330 71.5
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 1.1e-126 457.2 324 71.3
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 1.4e-126 456.8 324 71.6
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 1.4e-126 456.8 324 72.2
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.4e-126 456.8 324 71.9
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 1.8e-126 456.4 330 71.8
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 3.1e-126 455.7 324 71.3
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 3.1e-126 455.7 324 71.6
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 4.1e-126 455.3 330 70.9
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 5.4e-126 454.9 324 71.9
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 5.4e-126 454.9 324 71.0
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 7.0e-126 454.5 324 71.0
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 9.2e-126 454.1 324 71.0
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 9.2e-126 454.1 324 71.9
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 9.2e-126 454.1 330 70.9
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.2e-125 453.8 324 70.1
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 1.2e-125 453.8 324 71.6
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 1.2e-125 453.8 324 71.3
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 2.0e-125 453.0 330 71.2
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 2.7e-125 452.6 330 71.2
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 2.7e-125 452.6 324 71.0
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 2.7e-125 452.6 324 71.3
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 2.7e-125 452.6 324 71.3
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 2.7e-125 452.6 324 70.4
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 3.5e-125 452.2 324 69.8
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 3.5e-125 452.2 324 70.4
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 4.5e-125 451.8 322 71.7
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 4.5e-125 451.8 322 72.0
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 4.5e-125 451.8 324 70.7
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 4.5e-125 451.8 324 71.0
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 4.5e-125 451.8 325 70.8
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 5.9e-125 451.4 324 71.0
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 7.7e-125 451.1 324 69.4
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 7.7e-125 451.1 322 71.7
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 7.7e-125 451.1 324 70.7
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 7.7e-125 451.1 324 70.4
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 1.0e-124 450.7 324 70.4
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 1.0e-124 450.7 324 70.1
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 1.3e-124 450.3 322 71.4
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.3e-124 450.3 324 70.7
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 1.7e-124 449.9 322 71.7
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 1.7e-124 449.9 330 70.0
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 2.3e-124 449.5 324 69.4
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 2.3e-124 449.5 327 69.4
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 2.3e-124 449.5 330 69.7
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 2.3e-124 449.5 326 71.2
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 2.9e-124 449.1 324 71.3
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 3.8e-124 448.7 324 70.1
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 3.8e-124 448.7 325 70.5
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 5.0e-124 448.4 330 70.3
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 6.6e-124 448.0 324 70.1
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 8.6e-124 447.6 325 70.5
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 8.6e-124 447.6 324 69.8
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 1.9e-123 446.4 324 69.8
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 1.9e-123 446.4 324 69.8
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 3.3e-123 445.7 330 69.1
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 4.3e-123 445.3 322 69.6
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 4.3e-123 445.3 324 70.4
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 4.3e-123 445.3 331 69.8
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 7.3e-123 444.5 325 69.5
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 9.5e-123 444.1 324 69.4
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 9.5e-123 444.1 324 69.4
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 9.5e-123 444.1 324 70.1
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 9.5e-123 444.1 360 65.6
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 1.2e-122 443.7 331 69.5
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 2.1e-122 443.0 324 69.4
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 2.1e-122 443.0 330 69.1
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 2.8e-122 442.6 331 68.0
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 2.8e-122 442.6 324 69.8
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 2.8e-122 442.6 330 68.8
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 2.8e-122 442.6 324 69.1
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 4.7e-122 441.8 323 71.2
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 6.1e-122 441.4 324 69.8
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 6.1e-122 441.4 330 68.8
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 8.0e-122 441.0 326 70.9
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.0e-121 440.7 330 68.5
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 1.0e-121 440.7 345 66.1
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 1.4e-121 440.3 324 68.8
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 2.3e-121 439.5 324 69.1
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 3.0e-121 439.1 323 70.6
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 3.0e-121 439.1 324 69.4
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.5e-120 436.8 330 68.2
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 4.4e-120 435.3 331 69.2
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 5.7e-120 434.9 324 70.4
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 7.5e-120 434.5 322 70.8
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 7.5e-120 434.5 317 70.7
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 9.8e-120 434.1 322 70.5
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 1.3e-119 433.7 323 70.3
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 2.2e-119 433.0 322 70.5
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 6.4e-119 431.4 327 69.7
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 2.4e-118 429.5 324 68.2
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 4.1e-118 428.7 328 68.3
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 9.2e-118 427.6 337 68.5
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 9.2e-118 427.6 337 68.5
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 9.2e-118 427.6 324 67.9
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.2e-117 427.2 343 65.6
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 7.8e-117 424.5 308 70.8
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.0e-116 424.1 308 70.8
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 2.3e-116 422.9 404 58.4
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 3.3e-115 419.1 324 67.6
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 4.3e-115 418.7 324 67.0
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 5.6e-115 418.3 305 70.5
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.0e-113 414.1 348 63.8
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 1.4e-113 413.7 324 68.5
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 4.4e-112 408.7 316 66.1
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 2.9e-111 406.0 298 69.1
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 8.3e-111 404.4 327 63.0
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.1e-110 404.1 301 68.4
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 1.2e-109 400.6 302 69.2
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 1.6e-109 400.2 321 66.4
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 3.9e-108 395.6 294 69.4
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 3.9e-108 395.6 323 65.3
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 3.3e-107 392.5 337 62.6
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 6.8e-105 384.8 326 58.6
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 6.8e-97 358.2 324 60.2
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 9.9e-96 354.4 325 58.5
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 1.2e-93 347.4 334 57.8
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 6.6e-92 341.7 177 91.5
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 1.5e-91 340.5 260 68.5
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.9e-91 340.1 435 48.0
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 1.2e-90 337.4 262 66.4
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 1.9e-86 323.6 173 86.1
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 4.3e-83 312.4 331 54.1
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 8.1e-82 308.1 449 44.1
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 4.6e-77 292.4 320 52.5
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 4.2e-70 269.2 324 48.5
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-69 267.3 155 80.0
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 1.3e-68 264.2 297 51.9
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 1.0e-60 238.0 319 41.1
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 4.3e-59 232.6 257 52.5
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 3.1e-41 173.3 196 50.5
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 3.1e-41 173.3 196 50.5
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 8.5e-39 165.2 245 43.3
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.1e-30 138.3 131 59.5
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 6.7e-28 129.0 209 40.7
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 7.0e-25 119.0 80 73.8
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 5.9e-24 115.9 72 70.8
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 6.5e-23 112.5 99 59.6
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 2.5e-22 110.5 59 89.8
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 3.6e-21 106.7 88 63.6
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 3.6e-21 106.7 88 63.6
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-14 84.3 46 87.0
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 8.9e-12 75.5 45 77.8
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.4e-09 68.2 40 85.0
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 1.6e-08 64.7 33 84.8
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 1.1e-06 58.5 41 75.6


User provided reference genes

Program Settings