Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 9.1e-147 523.5 250 100.0
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 6.9e-86 321.2 214 69.2
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 5.8e-85 318.2 221 69.7
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 4.9e-84 315.1 194 73.2
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 8.4e-84 314.3 219 68.5
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 1.9e-83 313.2 182 75.8
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 4.6e-82 308.5 182 74.2
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 3.9e-81 305.4 202 69.8
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 8.7e-81 304.3 218 67.0
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 1.1e-80 303.9 182 74.7
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 1.9e-80 303.1 202 69.3
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 2.5e-80 302.8 217 66.4
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 3.3e-80 302.4 205 69.3
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 3.3e-80 302.4 213 66.7
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 3.3e-80 302.4 213 66.7
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 7.3e-80 301.2 211 66.8
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 7.3e-80 301.2 203 69.0
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 7.3e-80 301.2 197 67.5
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 1.6e-79 300.1 219 66.7
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 3.6e-79 298.9 195 69.7
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 2.6e-77 292.7 201 65.7
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 4.5e-77 292.0 205 66.3
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 1.3e-76 290.4 170 74.1
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 2.9e-76 289.3 216 62.0
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 3.8e-76 288.9 190 66.3
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 1.1e-75 287.3 199 65.8
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 1.9e-75 286.6 190 66.3
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 3.2e-75 285.8 222 62.6
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 3.2e-75 285.8 182 68.7
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 5.4e-75 285.0 182 72.0
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 7.1e-75 284.6 201 63.2
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 1.6e-74 283.5 201 65.7
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 4.6e-74 282.0 204 65.2
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 7.9e-74 281.2 193 66.8
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 1.0e-73 280.8 183 68.9
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 1.0e-73 280.8 182 69.2
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.3e-73 280.4 182 69.2
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 1.8e-73 280.0 198 66.7
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 3.0e-73 279.3 203 64.0
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 3.0e-73 279.3 207 64.7
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 3.0e-73 279.3 209 62.2
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 6.7e-73 278.1 183 68.3
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 6.7e-73 278.1 185 68.6
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 8.7e-73 277.7 185 70.3
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 2.5e-72 276.2 148 79.1
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 5.6e-72 275.0 183 68.3
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 5.6e-72 275.0 169 72.2
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 5.6e-72 275.0 217 60.8
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 7.4e-72 274.6 202 65.3
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 9.6e-72 274.2 182 67.6
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 9.6e-72 274.2 200 63.0
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 1.3e-71 273.9 185 68.1
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 1.3e-71 273.9 201 64.2
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 1.6e-71 273.5 199 65.8
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 1.6e-71 273.5 182 69.8
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 3.6e-71 272.3 182 68.1
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 3.6e-71 272.3 200 63.0
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 6.2e-71 271.6 183 66.7
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 8.1e-71 271.2 185 66.5
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 1.1e-70 270.8 219 59.8
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 1.4e-70 270.4 199 64.3
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 1.4e-70 270.4 218 61.5
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 2.4e-70 269.6 181 69.1
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 5.3e-70 268.5 203 63.1
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 6.9e-70 268.1 186 65.1
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 6.9e-70 268.1 185 67.6
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 9.0e-70 267.7 218 61.0
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 2.0e-69 266.5 212 58.5
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 4.5e-69 265.4 211 61.6
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 4.5e-69 265.4 211 61.6
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 4.5e-69 265.4 211 61.6
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 5.8e-69 265.0 182 66.5
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 1.3e-68 263.8 203 61.1
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 1.7e-68 263.5 178 68.0
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 2.2e-68 263.1 194 61.9
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 2.9e-68 262.7 189 64.6
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 3.8e-68 262.3 181 66.3
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 4.9e-68 261.9 209 61.7
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 6.4e-68 261.5 185 62.7
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 3.2e-67 259.2 229 57.6
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 3.2e-67 259.2 201 60.2
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 3.5e-66 255.8 182 64.3
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 3.5e-66 255.8 201 59.2
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 1.1e-64 250.8 182 63.2
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 1.5e-64 250.4 217 56.7
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 2.5e-64 249.6 207 58.9
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 2.5e-64 249.6 182 63.2
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 2.8e-63 246.1 181 63.5
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 1.8e-62 243.4 181 62.4
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 8.4e-60 234.6 186 61.3
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 1.9e-59 233.4 177 58.8
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 4.8e-55 218.8 137 75.2
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 5.9e-53 211.8 136 72.1
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 8.5e-52 208.0 202 53.0
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 4.2e-51 205.7 135 71.1
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.3e-44 184.1 180 47.8
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.3e-44 184.1 136 64.0
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 7.9e-42 174.9 134 60.4
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 2.0e-40 170.2 143 61.5
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 4.8e-39 165.6 234 38.0
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 3.6e-34 149.4 118 54.2
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 5.7e-32 142.1 121 55.4
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 9.7e-32 141.4 106 60.4
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 2.2e-31 140.2 191 39.8
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 2.2e-28 130.2 95 67.4
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 1.3e-23 114.4 174 36.8
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 5.4e-14 82.4 79 54.4
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 7.0e-14 82.0 48 64.6
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 3.5e-13 79.7 40 82.5
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 6.5e-12 75.5 52 61.5
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 1.6e-10 70.9 66 47.0
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 2.3e-09 67.0 83 41.0
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.1e-06 58.2 86 39.5


User provided reference genes

Program Settings