Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023095.1 Olea europaea HOM05D002628 ORTHO05D002785 2.4e-215 751.9 384 100.0
Oeu009720.1 Olea europaea HOM05D002628 ORTHO05D002785 4.2e-42 176.4 101 84.2
Nitab4.5_0000045g0240 Nicotiana tabacum HOM05D002628 ORTHO05D002785 6.3e-38 162.5 100 78.0
Nitab4.5_0003758g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 3.4e-36 156.8 100 76.0
Sopen09g023690 Solanum pennellii HOM05D002628 ORTHO05D002785 5.0e-35 152.9 100 74.0
QL09p053994 Quercus lobata HOM05D002628 ORTHO05D002785 6.5e-35 152.5 101 73.3
CAN.G15.8 Capsicum annuum HOM05D002628 ORTHO05D002785 1.4e-34 151.4 100 75.0
Oeu004073.1 Olea europaea HOM05D002628 ORTHO05D002785 1.4e-34 151.4 100 76.0
Manes.12G045400 Manihot esculenta HOM05D002628 ORTHO05D002785 2.5e-34 150.6 100 75.0
Cfa002577 Carpinus fangiana HOM05D002628 ORTHO05D002785 4.2e-34 149.8 101 72.3
Haze_24810 Corylus avellana HOM05D002628 ORTHO05D002785 4.2e-34 149.8 101 72.3
Dinv12687 Davidia involucrata HOM05D002628 ORTHO05D002785 4.2e-34 149.8 100 75.0
COL.COLO4_15677 Corchorus olitorius HOM05D002628 ORTHO05D002785 9.3e-34 148.7 101 71.3
Dinv19196 Davidia involucrata HOM05D002628 ORTHO05D002785 9.3e-34 148.7 100 74.0
Duzib138G1695 Durio zibethinus HOM05D002628 ORTHO05D002785 9.3e-34 148.7 101 70.3
GSVIVG01028685001 Vitis vinifera HOM05D002628 ORTHO05D002785 9.3e-34 148.7 101 73.3
CiPaw.03G148700 Carya illinoinensis HOM05D002628 ORTHO05D002785 1.2e-33 148.3 101 72.3
Duzib211G0579 Durio zibethinus HOM05D002628 ORTHO05D002785 1.6e-33 147.9 101 70.3
Prupe.8G201800 Prunus persica HOM05D002628 ORTHO05D002785 3.6e-33 146.7 101 72.3
Rhsim01G0255500 Rhododendron simsii HOM05D002628 ORTHO05D002785 3.6e-33 146.7 100 72.0
vmacro14750 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 3.6e-33 146.7 100 71.0
FAN15G1468 Fragaria x ananassa HOM05D002628 ORTHO05D002785 7.9e-33 145.6 101 72.3
FvH4_2g18860 Fragaria vesca HOM05D002628 ORTHO05D002785 1.0e-32 145.2 101 72.3
FAN24G2878 Fragaria x ananassa HOM05D002628 ORTHO05D002785 1.0e-32 145.2 101 72.3
FAN27G0734 Fragaria x ananassa HOM05D002628 ORTHO05D002785 1.0e-32 145.2 101 72.3
Solyc06g083420.3 Solanum lycopersicum HOM05D002628 ORTHO05D002785 1.0e-32 145.2 100 72.0
Sopen06g034780 Solanum pennellii HOM05D002628 ORTHO05D002785 1.0e-32 145.2 100 72.0
Ciclev10018446m.g Citrus clementina HOM05D002628 ORTHO05D002785 2.3e-32 144.1 101 70.3
Lj2C1130G3 Lonicera japonica HOM05D002628 ORTHO05D002785 2.3e-32 144.1 101 72.3
RcHm_v2.0_Chr6g0284671 Rosa chinensis HOM05D002628 ORTHO05D002785 2.3e-32 144.1 101 72.3
Actinidia09479 Actinidia chinensis HOM05D002628 ORTHO05D002785 3.0e-32 143.7 98 71.4
Glyma.18G169600 Glycine max HOM05D002628 ORTHO05D002785 3.0e-32 143.7 101 69.3
Thecc.01G224600 Theobroma cacao HOM05D002628 ORTHO05D002785 3.0e-32 143.7 101 69.3
arahy.Tifrunner.gnm1.ann1.23VDWQ Arachis hypogaea HOM05D002628 ORTHO05D002785 3.9e-32 143.3 101 71.3
Cc01_g16950 Coffea canephora HOM05D002628 ORTHO05D002785 3.9e-32 143.3 99 69.7
Migut.D02520 Erythranthe guttata HOM05D002628 ORTHO05D002785 3.9e-32 143.3 100 70.0
CSS0046762 Camellia sinensis var. sinensis HOM05D002628 ORTHO05D002785 5.1e-32 142.9 100 71.0
arahy.Tifrunner.gnm1.ann1.82MK2E Arachis hypogaea HOM05D002628 ORTHO05D002785 1.1e-31 141.7 101 70.3
Nitab4.5_0002223g0030 Nicotiana tabacum HOM05D002628 ORTHO05D002785 1.1e-31 141.7 100 69.0
Peaxi162Scf00517g00636 Petunia axillaris HOM05D002628 ORTHO05D002785 1.1e-31 141.7 100 71.0
TPR.G31107 Trifolium pratense HOM05D002628 ORTHO05D002785 1.1e-31 141.7 101 68.3
CAN.G771.81 Capsicum annuum HOM05D002628 ORTHO05D002785 1.5e-31 141.4 100 69.0
Psat3g145600 Pisum sativum HOM05D002628 ORTHO05D002785 1.5e-31 141.4 101 67.3
Duzib133G0258 Durio zibethinus HOM05D002628 ORTHO05D002785 1.9e-31 141.0 101 68.3
Nitab4.5_0001564g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 2.5e-31 140.6 100 68.0
MD05G1174400 Malus domestica HOM05D002628 ORTHO05D002785 3.3e-31 140.2 101 69.3
VMungo1383G1872 Vigna mungo HOM05D002628 ORTHO05D002785 4.3e-31 139.8 101 67.3
Gohir.D11G144700 Gossypium hirsutum HOM05D002628 ORTHO05D002785 5.7e-31 139.4 101 66.3
Gorai.007G155000 Gossypium raimondii HOM05D002628 ORTHO05D002785 5.7e-31 139.4 101 66.3
Actinidia37601 Actinidia chinensis HOM05D002628 ORTHO05D002785 7.4e-31 139.0 110 66.4
CANSAT01G2524 Cannabis sativa HOM05D002628 ORTHO05D002785 7.4e-31 139.0 101 68.3
Ca_26871_v3 Cicer arietinum L. HOM05D002628 ORTHO05D002785 7.4e-31 139.0 101 67.3
Medtr7g056603 Medicago truncatula HOM05D002628 ORTHO05D002785 7.4e-31 139.0 101 68.3
Phvul.008G126600 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 7.4e-31 139.0 100 69.0
Glyma.08G352600 Glycine max HOM05D002628 ORTHO05D002785 1.3e-30 138.3 101 67.3
Gohir.A11G137900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 2.2e-30 137.5 101 65.3
MD10G1163500 Malus domestica HOM05D002628 ORTHO05D002785 3.7e-30 136.7 99 69.7
Manes.13G047100 Manihot esculenta HOM05D002628 ORTHO05D002785 4.8e-30 136.3 101 69.3
TAR362G0009 Trochodendron aralioides HOM05D002628 ORTHO05D002785 4.8e-30 136.3 117 63.2
Gohir.D08G212600 Gossypium hirsutum HOM05D002628 ORTHO05D002785 1.4e-29 134.8 101 66.3
Glyma.16G093800 Glycine max HOM05D002628 ORTHO05D002785 1.8e-29 134.4 101 69.3
TAR633G2086 Trochodendron aralioides HOM05D002628 ORTHO05D002785 1.8e-29 134.4 100 71.0
Gorai.004G226000 Gossypium raimondii HOM05D002628 ORTHO05D002785 2.4e-29 134.0 101 66.3
Lj1A87T37 Lonicera japonica HOM05D002628 ORTHO05D002785 2.4e-29 134.0 75 84.0
Lj1g0019543 Lotus japonicus HOM05D002628 ORTHO05D002785 2.4e-29 134.0 101 65.3
Gohir.D07G163200 Gossypium hirsutum HOM05D002628 ORTHO05D002785 4.1e-29 133.3 101 66.3
CSS0048005 Camellia sinensis var. sinensis HOM05D002628 ORTHO05D002785 5.3e-29 132.9 120 60.8
Gohir.A07G201100 Gossypium hirsutum HOM05D002628 ORTHO05D002785 6.9e-29 132.5 101 65.3
vmacro02763 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 6.9e-29 132.5 103 63.1
Gohir.A08G194900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 9.1e-29 132.1 101 65.3
TWI18G0012 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 1.2e-28 131.7 101 65.3
Actinidia23721 Actinidia chinensis HOM05D002628 ORTHO05D002785 2.0e-28 131.0 100 66.0
AUR62008919 Chenopodium quinoa HOM05D002628 ORTHO05D002785 2.6e-28 130.6 100 66.0
Gorai.001G187100 Gossypium raimondii HOM05D002628 ORTHO05D002785 2.6e-28 130.6 101 65.3
Gorai.001G233800 Gossypium raimondii HOM05D002628 ORTHO05D002785 2.6e-28 130.6 101 64.4
AUR62001094 Chenopodium quinoa HOM05D002628 ORTHO05D002785 3.4e-28 130.2 100 67.0
Lalb_Chr19g0125651 Lupinus albus HOM05D002628 ORTHO05D002785 5.9e-28 129.4 118 58.5
TWI36G1593 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 5.9e-28 129.4 101 66.3
SGA_v2.0_scaffold6G03236 Striga asiatica HOM05D002628 ORTHO05D002785 7.7e-28 129.0 98 68.4
MBI18_g12534_MAGBIO Magnolia biondii HOM05D002628 ORTHO05D002785 1.0e-27 128.6 101 66.3
Potri.002G243400 Populus trichocarpa HOM05D002628 ORTHO05D002785 1.7e-27 127.9 101 66.3
Sabra02G0185300 Salix brachista HOM05D002628 ORTHO05D002785 2.2e-27 127.5 101 66.3
Hund05562 Selenicereus undatus HOM05D002628 ORTHO05D002785 2.2e-27 127.5 100 66.0
TWI75G1871 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 3.8e-27 126.7 101 65.3
Ah.08g214370 Amaranthus hybridus HOM05D002628 ORTHO05D002785 5.0e-27 126.3 100 67.0
SalBow6G2694 Salvia bowleyana HOM05D002628 ORTHO05D002785 5.0e-27 126.3 101 66.3
SalBow6G7039 Salvia bowleyana HOM05D002628 ORTHO05D002785 5.0e-27 126.3 101 66.3
DCAR_012652 Daucus carota HOM05D002628 ORTHO05D002785 6.5e-27 125.9 100 65.0
Rhsim13G0045600 Rhododendron simsii HOM05D002628 ORTHO05D002785 8.5e-27 125.6 113 56.6
THA.LOC104821651 Tarenaya hassleriana HOM05D002628 ORTHO05D002785 8.5e-27 125.6 93 65.6
PSO675G2169 Papaver somniferum HOM05D002628 ORTHO05D002785 1.4e-26 124.8 126 54.8
Potri.014G189900 Populus trichocarpa HOM05D002628 ORTHO05D002785 1.4e-26 124.8 101 66.3
Eucgr.H00795 Eucalyptus grandis HOM05D002628 ORTHO05D002785 1.9e-26 124.4 107 58.9
Lalb_Chr01g0022291 Lupinus albus HOM05D002628 ORTHO05D002785 1.9e-26 124.4 118 58.5
SalBow3G0995 Salvia bowleyana HOM05D002628 ORTHO05D002785 1.9e-26 124.4 99 68.7
MSTRG.12779 Avicennia marina HOM05D002628 ORTHO05D002785 2.5e-26 124.0 99 70.7
Gohir.A07G157100 Gossypium hirsutum HOM05D002628 ORTHO05D002785 2.5e-26 124.0 100 62.0
AT3G24870 Arabidopsis thaliana HOM05D002628 ORTHO05D002785 3.2e-26 123.6 93 63.4
AT3G24880 Arabidopsis thaliana HOM05D002628 ORTHO05D002785 3.2e-26 123.6 93 63.4
Phvul.010G018800 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 4.2e-26 123.2 100 64.0
Lj3g0004121 Lotus japonicus HOM05D002628 ORTHO05D002785 5.5e-26 122.9 101 62.4
Hund18389 Selenicereus undatus HOM05D002628 ORTHO05D002785 7.2e-26 122.5 100 62.0
Sc05g0002110 Simmondsia chinensis HOM05D002628 ORTHO05D002785 1.2e-25 121.7 100 64.0
AL3G40640 Arabidopsis lyrata HOM05D002628 ORTHO05D002785 2.1e-25 120.9 93 61.3
MELO3C021029.2 Cucumis melo HOM05D002628 ORTHO05D002785 2.7e-25 120.6 101 61.4
CsaV3_7G026060 Cucumis sativus L. HOM05D002628 ORTHO05D002785 2.7e-25 120.6 101 61.4
Thhalv10002368m.g Eutrema salsugineum HOM05D002628 ORTHO05D002785 2.7e-25 120.6 93 61.3
ClCG09G008950 Citrullus lanatus HOM05D002628 ORTHO05D002785 3.6e-25 120.2 101 63.4
Lsat_1_v5_gn_5_180401 Lactuca sativa HOM05D002628 ORTHO05D002785 3.6e-25 120.2 84 69.0
Lalb_Chr03g0041701 Lupinus albus HOM05D002628 ORTHO05D002785 4.6e-25 119.8 110 60.0
CARHR101290 Cardamine hirsuta HOM05D002628 ORTHO05D002785 6.1e-25 119.4 93 61.3
Carub.0003s2528 Capsella rubella HOM05D002628 ORTHO05D002785 7.9e-25 119.0 93 61.3
Sabra14G0142700 Salix brachista HOM05D002628 ORTHO05D002785 7.9e-25 119.0 101 64.4
Nn1g07877 Nelumbo nucifera HOM05D002628 ORTHO05D002785 1.4e-24 118.2 86 67.4
Aqoxy6G02008 Aquilegia oxysepala HOM05D002628 ORTHO05D002785 1.8e-24 117.9 99 62.6
AL9U11010 Arabidopsis lyrata HOM05D002628 ORTHO05D002785 1.8e-24 117.9 102 58.8
Carub.0003s2526 Capsella rubella HOM05D002628 ORTHO05D002785 2.3e-24 117.5 93 61.3
MSTRG.18000 Avicennia marina HOM05D002628 ORTHO05D002785 3.9e-24 116.7 99 65.7
Sp3g22600 Schrenkiella parvula HOM05D002628 ORTHO05D002785 1.1e-23 115.2 101 57.4
SpUn0027_0080 Schrenkiella parvula HOM05D002628 ORTHO05D002785 1.1e-23 115.2 101 57.4
Sed0013250 Sechium edule HOM05D002628 ORTHO05D002785 1.5e-23 114.8 100 62.0
BraA03t13528Z Brassica rapa HOM05D002628 ORTHO05D002785 2.0e-23 114.4 107 53.3
A03p43970 Brassica napus HOM05D002628 ORTHO05D002785 3.3e-23 113.6 93 57.0
ECA236G2127 Erigeron canadensis HOM05D002628 ORTHO05D002785 3.3e-23 113.6 115 55.7
PGR083G0125 Punica granatum HOM05D002628 ORTHO05D002785 4.4e-23 113.2 101 57.4
Aa31LG8G11310 Aethionema arabicum HOM05D002628 ORTHO05D002785 5.7e-23 112.8 114 50.9
Lsat_1_v5_gn_8_89820 Lactuca sativa HOM05D002628 ORTHO05D002785 5.7e-23 112.8 88 65.9
BolC3t17718H Brassica oleracea HOM05D002628 ORTHO05D002785 7.4e-23 112.5 93 55.9
Migut.N00621 Erythranthe guttata HOM05D002628 ORTHO05D002785 9.7e-23 112.1 99 63.6
BcaC01g03251 Brassica carinata HOM05D002628 ORTHO05D002785 1.3e-22 111.7 93 55.9
C03p54320 Brassica napus HOM05D002628 ORTHO05D002785 1.3e-22 111.7 93 55.9
DCAR_018575 Daucus carota HOM05D002628 ORTHO05D002785 1.3e-22 111.7 111 55.9
Sed0004451 Sechium edule HOM05D002628 ORTHO05D002785 1.3e-22 111.7 101 59.4
BcaC06g35765 Brassica carinata HOM05D002628 ORTHO05D002785 1.7e-22 111.3 93 57.0
C07p11110 Brassica napus HOM05D002628 ORTHO05D002785 2.2e-22 110.9 93 57.0
BolC7t41583H Brassica oleracea HOM05D002628 ORTHO05D002785 2.2e-22 110.9 93 57.0
BraA07t28522Z Brassica rapa HOM05D002628 ORTHO05D002785 2.2e-22 110.9 108 53.7
Ah.15g094000 Amaranthus hybridus HOM05D002628 ORTHO05D002785 3.7e-22 110.2 100 60.0
HanXRQChr04g0108091 Helianthus annuus HOM05D002628 ORTHO05D002785 4.8e-22 109.8 72 73.6
HanXRQChr01g0015181 Helianthus annuus HOM05D002628 ORTHO05D002785 6.3e-22 109.4 95 60.0
BcaB08g34428 Brassica carinata HOM05D002628 ORTHO05D002785 1.1e-21 108.6 101 54.5
Sp7g10520 Schrenkiella parvula HOM05D002628 ORTHO05D002785 1.1e-21 108.6 101 58.4
Glyma.03G081300 Glycine max HOM05D002628 ORTHO05D002785 3.1e-21 107.1 101 58.4
Os08g0177300 Oryza sativa ssp. japonica HOM05D002628 ORTHO05D002785 4.1e-21 106.7 84 61.9
ECA248G1308 Erigeron canadensis HOM05D002628 ORTHO05D002785 5.3e-21 106.3 160 44.4
Aa31LG9G4800 Aethionema arabicum HOM05D002628 ORTHO05D002785 6.9e-21 105.9 93 53.8
A07p07330 Brassica napus HOM05D002628 ORTHO05D002785 9.1e-21 105.5 93 55.9
ATR0796G038 Amborella trichopoda HOM05D002628 ORTHO05D002785 5.9e-20 102.8 109 52.3
unitig_46.g18239 Utricularia gibba HOM05D002628 ORTHO05D002785 1.7e-19 101.3 94 57.4
ATR0618G010 Amborella trichopoda HOM05D002628 ORTHO05D002785 6.5e-19 99.4 144 42.4
ECA247G3882 Erigeron canadensis HOM05D002628 ORTHO05D002785 6.5e-19 99.4 103 51.5
unitig_37.g12886 Utricularia gibba HOM05D002628 ORTHO05D002785 4.2e-18 96.7 138 43.5
Zm00001eb160300 Zea mays HOM05D002628 ORTHO05D002785 5.5e-18 96.3 75 62.7
Os05g0593550 Oryza sativa ssp. japonica HOM05D002628 ORTHO05D002785 9.4e-18 95.5 102 53.9
BcaB03g16110 Brassica carinata HOM05D002628 ORTHO05D002785 1.6e-17 94.7 101 55.4
Zm00001eb160310 Zea mays HOM05D002628 ORTHO05D002785 2.1e-17 94.4 99 53.5
BcaC02g09445 Brassica carinata HOM05D002628 ORTHO05D002785 2.7e-17 94.0 101 54.5
HanXRQChr14g0445581 Helianthus annuus HOM05D002628 ORTHO05D002785 2.7e-17 94.0 125 51.2
BcaB06g26704 Brassica carinata HOM05D002628 ORTHO05D002785 3.6e-17 93.6 120 45.8
C04p42820 Brassica napus HOM05D002628 ORTHO05D002785 3.6e-17 93.6 101 54.5
BolC4t25848H Brassica oleracea HOM05D002628 ORTHO05D002785 3.6e-17 93.6 101 54.5
SGA_v2.0_scaffold3G01640 Striga asiatica HOM05D002628 ORTHO05D002785 1.8e-16 91.3 66 71.2
BraA04t16589Z Brassica rapa HOM05D002628 ORTHO05D002785 8.8e-16 89.0 102 53.9
Cpa.g.sc8.144 Carica papaya HOM05D002628 ORTHO05D002785 1.1e-15 88.6 73 63.0
HPP92_002819 Vanilla planifolia HOM05D002628 ORTHO05D002785 1.1e-15 88.6 100 51.0
Eucgr.K02162 Eucalyptus grandis HOM05D002628 ORTHO05D002785 4.4e-15 86.7 93 51.6
A04p08930 Brassica napus HOM05D002628 ORTHO05D002785 1.3e-14 85.1 102 52.9
CDE07G1586 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 6.3e-14 82.8 108 42.6
CDE04G0039 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 1.8e-13 81.3 108 41.7
HPP92_000545 Vanilla planifolia HOM05D002628 ORTHO05D002785 1.8e-13 81.3 92 55.4
SHI31153 Sapria himalayana HOM05D002628 ORTHO05D002785 7.0e-13 79.3 115 47.0
HPP92_000535 Vanilla planifolia HOM05D002628 ORTHO05D002785 1.2e-12 78.6 91 54.9
Zm00001eb345290 Zea mays HOM05D002628 ORTHO05D002785 1.3e-11 75.1 121 41.3
Oeu024052.1 Olea europaea HOM05D021246 ORTHO05D020772 2.5e-10 70.9 87 50.6
DCAR_000525 Daucus carota HOM05D002628 ORTHO05D002785 7.2e-10 69.3 100 44.0
Atru.chr5.2102 Acer truncatum HOM05D002628 ORTHO05D002785 1.4e-08 65.1 39 79.5
Oeu047437.1 Olea europaea HOM05D001090 ORTHO05D020772 6.7e-08 62.8 80 47.5
Oeu043313.1 Olea europaea HOM05D021246 ORTHO05D020772 2.6e-07 60.8 48 70.8
Oeu036949.1 Olea europaea HOM05D021246 ORTHO05D020772 5.7e-07 59.7 74 44.6
Medtr0340s0020 Medicago truncatula HOM05D002628 ORTHO05D002785 6.3e-06 56.2 50 52.0
Solyc09g060080.4 Solanum lycopersicum HOM05D002628 ORTHO05D002785 8.2e-06 55.8 36 69.4


User provided reference genes

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