Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 1.1e-92 343.2 161 100.0
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.9e-77 292.0 150 89.3
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 4.6e-75 284.6 149 89.3
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 3.9e-74 281.6 149 87.2
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.1e-73 280.0 152 83.6
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.1e-73 280.0 152 83.6
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 7.3e-73 277.3 149 86.6
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 9.5e-73 276.9 149 85.2
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.2e-72 276.6 149 84.6
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 1.2e-72 276.6 149 84.6
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.6e-72 276.2 149 86.6
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.1e-72 275.8 149 85.9
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 2.1e-72 275.8 149 85.2
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.6e-72 275.0 149 84.6
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 3.6e-72 275.0 149 84.6
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 4.7e-72 274.6 149 85.9
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 6.2e-72 274.2 149 84.6
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 1.8e-71 272.7 149 83.2
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 4.0e-71 271.6 149 84.6
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 4.0e-71 271.6 149 84.6
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 8.9e-71 270.4 149 83.9
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 4.4e-70 268.1 149 83.2
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 5.8e-70 267.7 150 84.0
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 7.6e-70 267.3 149 84.6
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 9.9e-70 266.9 149 83.2
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 1.3e-69 266.5 150 82.7
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 1.3e-69 266.5 149 84.6
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 3.8e-69 265.0 149 83.9
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.1e-68 263.5 149 82.6
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.9e-68 262.7 150 82.0
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 2.4e-68 262.3 149 82.6
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 2.4e-68 262.3 149 82.6
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.2e-68 261.9 149 80.5
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 3.2e-68 261.9 149 81.9
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 4.1e-68 261.5 149 83.2
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.2e-67 260.0 149 79.9
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 1.2e-67 260.0 149 79.9
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.6e-67 259.6 149 81.9
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 2.1e-67 259.2 149 79.9
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 2.1e-67 259.2 149 81.9
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.7e-67 258.8 149 81.2
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 4.6e-67 258.1 149 81.9
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 6.0e-67 257.7 149 81.2
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 1.0e-66 256.9 149 78.5
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.0e-66 256.9 149 80.5
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.3e-66 256.5 149 79.2
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 1.3e-66 256.5 149 80.5
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 1.7e-66 256.1 149 79.9
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 2.3e-66 255.8 149 78.5
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 3.0e-66 255.4 149 77.9
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 3.0e-66 255.4 149 77.9
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 5.1e-66 254.6 149 79.9
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 5.1e-66 254.6 149 79.9
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 6.6e-66 254.2 149 77.2
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 6.6e-66 254.2 149 77.2
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 6.6e-66 254.2 149 77.2
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 6.6e-66 254.2 149 77.2
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 6.6e-66 254.2 149 79.9
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 8.6e-66 253.8 149 76.5
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 8.6e-66 253.8 149 77.2
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 1.1e-65 253.4 150 80.0
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 1.5e-65 253.1 149 77.9
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.9e-65 252.7 149 76.5
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 1.9e-65 252.7 149 76.5
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 2.5e-65 252.3 149 79.9
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 3.3e-65 251.9 149 76.5
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 3.3e-65 251.9 149 76.5
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 4.3e-65 251.5 152 75.0
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 7.3e-65 250.8 149 77.2
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 9.6e-65 250.4 150 79.3
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 2.8e-64 248.8 149 75.2
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 2.8e-64 248.8 149 75.8
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 3.6e-64 248.4 149 74.5
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 3.6e-64 248.4 149 74.5
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 8.1e-64 247.3 149 76.5
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 1.1e-63 246.9 140 81.4
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.2e-62 243.4 148 75.0
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 2.0e-62 242.7 149 75.2
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 2.0e-62 242.7 148 74.3
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 5.8e-62 241.1 149 73.2
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 5.8e-62 241.1 149 73.2
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 5.8e-62 241.1 149 73.8
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 7.6e-62 240.7 149 73.8
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.7e-61 239.6 149 73.8
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 3.5e-59 231.9 148 72.3
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.9e-58 228.4 170 68.2
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.3e-57 224.9 170 67.1
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 1.1e-55 220.3 150 68.0
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 1.1e-52 210.3 148 63.5
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 2.1e-51 206.1 117 82.9
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 6.0e-51 204.5 117 82.1
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 6.0e-51 204.5 117 81.2
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 8.7e-50 200.7 117 79.5
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 1.9e-49 199.5 115 81.7
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.9e-49 199.5 117 81.2
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 7.4e-49 197.6 149 60.4
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 7.4e-49 197.6 149 65.8
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 4.0e-47 191.8 117 78.6
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 2.0e-46 189.5 130 68.5
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.3e-45 186.8 112 79.5
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 8.4e-45 184.1 118 72.9
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 2.4e-44 182.6 102 86.3
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 9.6e-41 170.6 144 62.5
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 6.2e-40 167.9 107 70.1
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 4.5e-38 161.8 107 73.8
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 8.4e-37 157.5 103 72.8
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.5e-36 156.0 94 76.6
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 4.3e-33 145.2 87 78.2
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 4.3e-33 145.2 108 69.4
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 1.3e-32 143.7 88 77.3
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 2.2e-32 142.9 91 76.9
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 3.7e-32 142.1 117 62.4
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 9.0e-31 137.5 148 44.6
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 1.7e-29 133.3 88 73.9
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 4.6e-27 125.2 61 86.9
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 1.9e-25 119.8 84 70.2
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 2.4e-23 112.8 138 42.8
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 4.1e-23 112.1 77 72.7
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.2e-22 110.5 74 73.0
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 5.0e-21 105.1 170 36.5
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 1.8e-18 96.7 163 36.8
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 2.0e-17 93.2 51 76.5
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 3.8e-13 79.0 47 76.6
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 3.2e-12 75.9 50 66.0
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 3.0e-10 69.3 31 83.9
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.5e-09 67.0 56 60.7
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 5.3e-07 58.5 36 66.7


User provided reference genes

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