Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 0.0e+00 1150.2 588 100.0
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 7.4e-232 807.4 606 69.6
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 3.1e-230 802.0 558 73.7
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 1.6e-226 789.6 607 69.2
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 2.0e-216 756.1 606 64.2
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 3.3e-216 755.4 607 65.4
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 3.3e-216 755.4 644 62.9
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 1.2e-213 746.9 602 64.5
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 1.3e-212 743.4 605 64.3
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 1.7e-212 743.0 561 68.6
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 2.9e-212 742.3 604 64.4
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 7.2e-211 737.6 551 69.1
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 8.0e-210 734.2 593 63.6
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 1.0e-209 733.8 592 65.2
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 1.4e-209 733.4 600 64.8
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 1.8e-209 733.0 599 62.9
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 6.7e-209 731.1 603 63.0
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 2.4e-206 722.6 607 62.9
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 1.6e-205 719.9 562 67.6
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 4.5e-205 718.4 607 61.6
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 2.9e-204 715.7 604 62.4
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 6.5e-204 714.5 552 67.8
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 1.9e-203 713.0 575 62.6
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 2.5e-203 712.6 604 62.1
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 4.7e-202 708.4 607 61.0
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 3.0e-201 705.7 557 64.8
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 2.2e-199 699.5 603 60.7
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 3.1e-198 695.7 597 60.8
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 4.1e-198 695.3 594 60.4
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 5.4e-198 694.9 608 60.0
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 7.7e-197 691.0 659 58.1
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 1.5e-195 686.8 555 63.4
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 4.2e-195 685.3 593 60.9
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 4.2e-195 685.3 608 60.0
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.8e-194 682.6 591 61.1
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.8e-194 682.6 590 61.5
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 6.1e-194 681.4 604 59.3
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 1.4e-193 680.2 557 62.8
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 3.0e-193 679.1 591 59.2
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 7.5e-192 674.5 594 59.3
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 2.2e-191 672.9 606 56.8
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 3.7e-191 672.2 596 59.2
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 1.1e-190 670.6 535 63.7
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 1.4e-190 670.2 588 60.0
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 4.1e-190 668.7 592 59.0
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 9.2e-190 667.5 613 56.9
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 8.6e-188 661.0 638 56.4
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.5e-187 659.4 591 57.7
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 1.6e-186 656.8 606 55.9
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 1.0e-185 654.1 601 58.6
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 2.3e-185 652.9 551 60.8
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 6.8e-185 651.4 607 56.7
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 1.2e-184 650.6 607 56.7
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 1.2e-184 650.6 557 59.6
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.0e-184 649.8 587 58.8
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.6e-184 649.4 587 58.9
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 4.4e-184 648.7 563 59.9
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 7.5e-184 647.9 571 60.1
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 9.2e-182 641.0 543 61.1
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 1.6e-181 640.2 596 56.7
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 3.5e-181 639.0 599 55.8
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 6.0e-181 638.3 558 58.2
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 2.3e-180 636.3 607 57.5
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 1.1e-179 634.0 564 59.2
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 1.1e-179 634.0 559 57.6
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 4.3e-179 632.1 604 54.8
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 7.3e-179 631.3 559 57.4
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 1.6e-178 630.2 606 56.6
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 2.0e-176 623.2 559 56.9
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 2.0e-176 623.2 605 54.0
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 2.9e-175 619.4 612 54.2
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 7.0e-174 614.8 590 55.9
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 2.3e-172 609.8 561 56.3
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 9.5e-171 604.4 595 53.4
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 3.6e-170 602.4 583 53.2
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 4.7e-170 602.1 591 53.3
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 6.2e-170 601.7 582 52.9
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 6.2e-170 601.7 576 54.7
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 2.3e-169 599.7 584 52.9
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 2.3e-169 599.7 546 56.2
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 3.1e-169 599.4 584 52.9
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 4.0e-169 599.0 545 57.1
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 2.6e-168 596.3 584 52.9
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 5.8e-168 595.1 561 59.2
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 2.9e-167 592.8 587 54.0
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 3.7e-167 592.4 561 57.0
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 2.4e-166 589.7 585 54.2
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 2.7e-165 586.3 580 53.8
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.7e-164 583.6 543 55.4
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 1.9e-163 580.1 566 54.1
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 5.2e-161 572.0 570 53.9
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 9.9e-160 567.8 484 59.5
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.3e-159 567.4 486 58.6
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 6.4e-159 565.1 908 39.0
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 2.7e-157 559.7 586 52.0
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.6e-149 533.9 507 59.2
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 2.3e-148 530.0 542 51.5
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 8.7e-148 528.1 572 50.2
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 5.7e-131 472.2 409 59.9
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 1.4e-110 404.4 585 44.1
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 7.7e-104 382.1 263 71.9
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 3.1e-89 333.6 556 38.1
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 6.5e-87 325.9 575 36.3
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 1.4e-84 318.2 262 59.9
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 5.2e-84 316.2 543 36.1
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 2.0e-80 304.3 544 39.5
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 5.9e-80 302.8 213 69.0
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 8.0e-77 292.4 352 47.2
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 1.2e-75 288.5 544 35.8
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 3.7e-74 283.5 552 37.0
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 2.0e-72 277.7 255 58.0
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 2.3e-52 211.1 552 29.5
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 7.8e-40 169.5 155 52.3
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 4.8e-37 160.2 604 25.2
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 4.4e-35 153.7 638 23.2
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.3e-26 125.6 169 44.4
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.0e-23 115.9 128 51.6
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 2.3e-23 114.8 97 53.6
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 7.4e-22 109.8 74 67.6
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 7.4e-22 109.8 145 46.2
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 1.3e-21 109.0 558 25.1
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 1.2e-16 92.4 92 50.0
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 7.9e-16 89.7 73 60.3
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 5.1e-15 87.0 139 33.1
MBI15_g00935_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D016670 3.1e-12 77.8 221 30.8
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 3.8e-10 70.9 68 51.5
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 4.3e-06 57.4 145 32.4


User provided reference genes

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