Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018237.1 Olea europaea HOM05D004528 ORTHO05D005815 1.0e-252 876.3 458 100.0
Oeu018425.1 Olea europaea HOM05D004528 ORTHO05D005815 1.7e-95 354.0 199 89.9
MSTRG.17774 Avicennia marina HOM05D004528 ORTHO05D005815 1.8e-87 327.4 200 85.5
Lj7A674G30 Lonicera japonica HOM05D004528 ORTHO05D005815 6.7e-87 325.5 205 80.0
SalBow6G2464 Salvia bowleyana HOM05D004528 ORTHO05D005815 8.7e-87 325.1 200 84.5
Migut.J00603 Erythranthe guttata HOM05D004528 ORTHO05D005815 5.6e-86 322.4 200 83.5
Cc06_g11330 Coffea canephora HOM05D004528 ORTHO05D005815 3.7e-85 319.7 200 83.0
Manes.16G102700 Manihot esculenta HOM05D004528 ORTHO05D005815 4.8e-85 319.3 205 79.5
SGA_v2.0_scaffold62G21604 Striga asiatica HOM05D004528 ORTHO05D005815 6.2e-85 318.9 200 82.0
Gohir.A06G072200 Gossypium hirsutum HOM05D004528 ORTHO05D005815 8.1e-85 318.5 205 79.5
Gohir.D06G070800 Gossypium hirsutum HOM05D004528 ORTHO05D005815 8.1e-85 318.5 205 79.5
ECA240G0155 Erigeron canadensis HOM05D004528 ORTHO05D005815 1.4e-84 317.8 205 78.5
Duzib150G1454 Durio zibethinus HOM05D004528 ORTHO05D005815 1.8e-84 317.4 200 81.0
Gorai.010G082500 Gossypium raimondii HOM05D004528 ORTHO05D005815 2.4e-84 317.0 205 79.0
Sopen07g017560 Solanum pennellii HOM05D004528 ORTHO05D005815 3.1e-84 316.6 200 82.0
PGSC0003DMG400013151 Solanum tuberosum HOM05D004528 ORTHO05D005815 3.1e-84 316.6 200 82.0
Nitab4.5_0011030g0010 Nicotiana tabacum HOM05D004528 ORTHO05D005815 4.0e-84 316.2 200 82.5
Solyc07g039210.4 Solanum lycopersicum HOM05D004528 ORTHO05D005815 4.0e-84 316.2 200 82.0
Thecc.09G090300 Theobroma cacao HOM05D004528 ORTHO05D005815 6.9e-84 315.5 205 78.5
Nitab4.5_0005634g0070 Nicotiana tabacum HOM05D004528 ORTHO05D005815 9.0e-84 315.1 200 82.0
CAN.G1208.1 Capsicum annuum HOM05D004528 ORTHO05D005815 1.5e-83 314.3 200 81.5
GSVIVG01015212001 Vitis vinifera HOM05D004528 ORTHO05D005815 2.6e-83 313.5 205 77.1
DCAR_011978 Daucus carota HOM05D004528 ORTHO05D005815 4.5e-83 312.8 200 76.5
Actinidia25256 Actinidia chinensis HOM05D004528 ORTHO05D005815 7.6e-83 312.0 205 77.6
COL.COLO4_18209 Corchorus olitorius HOM05D004528 ORTHO05D005815 9.9e-83 311.6 205 78.0
Dinv36760 Davidia involucrata HOM05D004528 ORTHO05D005815 1.3e-82 311.2 205 77.6
Potri.006G221700 Populus trichocarpa HOM05D004528 ORTHO05D005815 1.3e-82 311.2 205 77.6
Eucgr.C00900 Eucalyptus grandis HOM05D004528 ORTHO05D005815 2.9e-82 310.1 205 77.1
Peaxi162Scf00709g00003 Petunia axillaris HOM05D004528 ORTHO05D005815 2.9e-82 310.1 205 78.0
CSS0033534 Camellia sinensis var. sinensis HOM05D004528 ORTHO05D005815 2.4e-81 307.0 205 74.6
Prupe.7G211100 Prunus persica HOM05D004528 ORTHO05D005815 5.5e-81 305.8 205 75.1
Hma1.2p1_0800F.1_g220090 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 9.3e-81 305.1 205 77.1
Atru.chr7.1579 Acer truncatum HOM05D004528 ORTHO05D005815 1.2e-80 304.7 205 76.1
Ciclev10008462m.g Citrus clementina HOM05D004528 ORTHO05D005815 1.6e-80 304.3 205 76.6
Glyma.13G103500 Glycine max HOM05D004528 ORTHO05D005815 3.5e-80 303.1 205 75.6
unitig_748.g7306 Utricularia gibba HOM05D004528 ORTHO05D005815 3.5e-80 303.1 200 78.0
THA.LOC104820025 Tarenaya hassleriana HOM05D004528 ORTHO05D005815 4.6e-80 302.8 205 75.1
TWI34G0432 Tripterygium wilfordii HOM05D004528 ORTHO05D005815 4.6e-80 302.8 205 75.6
MD02G1077700 Malus domestica HOM05D004528 ORTHO05D005815 6.0e-80 302.4 199 76.4
VMungo1215G0680 Vigna mungo HOM05D004528 ORTHO05D005815 6.0e-80 302.4 205 76.1
arahy.Tifrunner.gnm1.ann1.A138U3 Arachis hypogaea HOM05D004528 ORTHO05D005815 1.0e-79 301.6 205 74.1
Lsat_1_v5_gn_7_37341 Lactuca sativa HOM05D004528 ORTHO05D005815 1.0e-79 301.6 205 76.6
CANSAT56G0596 Cannabis sativa HOM05D004528 ORTHO05D005815 1.3e-79 301.2 205 74.6
CANSAT56G1313 Cannabis sativa HOM05D004528 ORTHO05D005815 1.3e-79 301.2 205 74.6
Glyma.17G055500 Glycine max HOM05D004528 ORTHO05D005815 1.8e-79 300.8 205 74.6
Lalb_Chr13g0299741 Lupinus albus HOM05D004528 ORTHO05D005815 1.8e-79 300.8 205 76.1
QL02p062827 Quercus lobata HOM05D004528 ORTHO05D005815 1.8e-79 300.8 200 76.0
Haze_25904 Corylus avellana HOM05D004528 ORTHO05D005815 2.3e-79 300.4 202 75.7
MD15G1206300 Malus domestica HOM05D004528 ORTHO05D005815 2.3e-79 300.4 199 75.9
Phvul.003G137300 Phaseolus vulgaris HOM05D004528 ORTHO05D005815 2.3e-79 300.4 205 75.1
Sed0012435 Sechium edule HOM05D004528 ORTHO05D005815 3.0e-79 300.1 205 74.6
vmacro17227 Vaccinium macrocarpon HOM05D004528 ORTHO05D005815 3.0e-79 300.1 236 67.4
RcHm_v2.0_Chr2g0093221 Rosa chinensis HOM05D004528 ORTHO05D005815 3.9e-79 299.7 205 74.1
ClCG11G001780 Citrullus lanatus HOM05D004528 ORTHO05D005815 5.1e-79 299.3 200 76.5
AL3G48690 Arabidopsis lyrata HOM05D004528 ORTHO05D005815 8.7e-79 298.5 205 75.1
arahy.Tifrunner.gnm1.ann1.PT0GJ5 Arachis hypogaea HOM05D004528 ORTHO05D005815 8.7e-79 298.5 205 73.7
Carub.0003s3385 Capsella rubella HOM05D004528 ORTHO05D005815 8.7e-79 298.5 205 74.6
Lj4g0008156 Lotus japonicus HOM05D004528 ORTHO05D005815 8.7e-79 298.5 200 75.5
Psat3g072560 Pisum sativum HOM05D004528 ORTHO05D005815 8.7e-79 298.5 200 75.0
CsaV3_2G001490 Cucumis sativus L. HOM05D004528 ORTHO05D005815 1.1e-78 298.1 205 74.1
PGR142G0229 Punica granatum HOM05D004528 ORTHO05D005815 1.5e-78 297.7 205 74.6
Thhalv10022707m.g Eutrema salsugineum HOM05D004528 ORTHO05D005815 1.9e-78 297.4 205 74.1
TPR.G3725 Trifolium pratense HOM05D004528 ORTHO05D005815 1.9e-78 297.4 200 75.0
A07p01220 Brassica napus HOM05D004528 ORTHO05D005815 2.5e-78 297.0 205 74.1
C07p02330 Brassica napus HOM05D004528 ORTHO05D005815 2.5e-78 297.0 205 74.6
BolC7t40641H Brassica oleracea HOM05D004528 ORTHO05D005815 2.5e-78 297.0 205 74.6
CARHR109990 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.5e-78 297.0 205 74.1
CiPaw.03G217000 Carya illinoinensis HOM05D004528 ORTHO05D005815 2.5e-78 297.0 207 74.4
BcaB08g34873 Brassica carinata HOM05D004528 ORTHO05D005815 3.3e-78 296.6 205 74.6
BcaC06g36598 Brassica carinata HOM05D004528 ORTHO05D005815 3.3e-78 296.6 205 74.1
BraA07t27910Z Brassica rapa HOM05D004528 ORTHO05D005815 3.3e-78 296.6 205 74.1
FvH4_1g07290 Fragaria vesca HOM05D004528 ORTHO05D005815 3.3e-78 296.6 205 72.7
FAN19G1322 Fragaria x ananassa HOM05D004528 ORTHO05D005815 3.3e-78 296.6 205 72.7
A07p01200 Brassica napus HOM05D004528 ORTHO05D005815 7.4e-78 295.4 200 75.5
TAR626G1836 Trochodendron aralioides HOM05D004528 ORTHO05D005815 2.1e-77 293.9 205 72.2
AT2G19560 Arabidopsis thaliana HOM05D004528 ORTHO05D005815 1.1e-76 291.6 205 72.7
FAN23G0078 Fragaria x ananassa HOM05D004528 ORTHO05D005815 1.8e-76 290.8 205 71.7
Aqoxy7G01232 Aquilegia oxysepala HOM05D004528 ORTHO05D005815 3.1e-76 290.0 205 71.2
MBI01_g09956_MAGBIO Magnolia biondii HOM05D004528 ORTHO05D005815 9.0e-76 288.5 200 72.0
EL10Ac8g19227 Beta vulgaris HOM05D004528 ORTHO05D005815 1.5e-75 287.7 204 72.1
FAN28G2769 Fragaria x ananassa HOM05D004528 ORTHO05D005815 1.5e-75 287.7 205 71.2
PSO063G0639 Papaver somniferum HOM05D004528 ORTHO05D005815 1.5e-75 287.7 206 70.4
Sc18g0002070 Simmondsia chinensis HOM05D004528 ORTHO05D005815 2.6e-75 287.0 199 74.9
PSO832G3660 Papaver somniferum HOM05D004528 ORTHO05D005815 4.5e-75 286.2 206 69.9
C05p19590 Brassica napus HOM05D004528 ORTHO05D005815 5.8e-75 285.8 217 70.0
BolC5t30662H Brassica oleracea HOM05D004528 ORTHO05D005815 5.8e-75 285.8 217 70.0
BcaC05g26001 Brassica carinata HOM05D004528 ORTHO05D005815 1.0e-74 285.0 217 69.6
AUR62033986 Chenopodium quinoa HOM05D004528 ORTHO05D005815 4.9e-74 282.7 204 72.1
Aa31LG8G16570 Aethionema arabicum HOM05D004528 ORTHO05D005815 6.5e-74 282.3 205 70.2
Medtr7g091650 Medicago truncatula HOM05D004528 ORTHO05D005815 7.9e-72 275.4 200 69.5
SHI24590 Sapria himalayana HOM05D004528 ORTHO05D005815 1.3e-71 274.6 205 69.8
Rhsim05G0022000 Rhododendron simsii HOM05D004528 ORTHO05D005815 1.8e-71 274.2 166 81.9
MELO3C004622.2 Cucumis melo HOM05D004528 ORTHO05D005815 3.0e-71 273.5 189 74.1
Sp3g32930 Schrenkiella parvula HOM05D004528 ORTHO05D005815 1.1e-70 271.6 205 70.7
HPP92_010492 Vanilla planifolia HOM05D004528 ORTHO05D005815 4.8e-69 266.2 199 66.8
HPP92_010493 Vanilla planifolia HOM05D004528 ORTHO05D005815 4.8e-69 266.2 199 66.8
SEGI_06455 Sequoiadendron giganteum HOM05D004528 ORTHO05D005815 8.2e-69 265.4 200 64.5
Pp3c17_12810 Physcomitrium patens HOM05D004528 ORTHO05D005815 2.4e-68 263.8 199 66.8
BcaB03g16691 Brassica carinata HOM05D004528 ORTHO05D005815 1.5e-67 261.2 206 67.5
Os09g0386400 Oryza sativa ssp. japonica HOM05D004528 ORTHO05D005815 2.6e-67 260.4 186 68.8
BcaB03g16690 Brassica carinata HOM05D004528 ORTHO05D005815 5.9e-67 259.2 207 66.7
Mapoly0005s0151 Marchantia polymorpha HOM05D004528 ORTHO05D005815 1.7e-66 257.7 199 63.8
CDE02G2136 Ceratophyllum demersum HOM05D004528 ORTHO05D005815 1.9e-65 254.2 164 75.0
BcaB04g16932 Brassica carinata HOM05D004528 ORTHO05D005815 2.1e-64 250.8 191 68.6
BcaB04g16933 Brassica carinata HOM05D004528 ORTHO05D005815 1.5e-62 244.6 191 67.0
Nn6g35452 Nelumbo nucifera HOM05D004528 ORTHO05D005815 1.5e-62 244.6 205 62.0
SMO117G0048 Selaginella moellendorffii HOM05D004528 ORTHO05D005815 1.5e-62 244.6 198 60.6
AagrBONN_evm.TU.Sc2ySwM_344.906 Anthoceros agrestis HOM05D004528 ORTHO05D005815 5.7e-62 242.7 200 60.0
Ca_08460_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 9.7e-62 241.9 200 65.0
AUR62027494 Chenopodium quinoa HOM05D004528 ORTHO05D005815 2.0e-59 234.2 204 63.2
FAN26G2732 Fragaria x ananassa HOM05D004528 ORTHO05D005815 4.8e-53 213.0 124 82.3
FAN26G1375 Fragaria x ananassa HOM05D004528 ORTHO05D005815 8.2e-53 212.2 124 82.3
Sabra06G0171200 Salix brachista HOM05D004528 ORTHO05D005815 8.2e-53 212.2 162 71.0
HanXRQChr09g0238111 Helianthus annuus HOM05D004528 ORTHO05D005815 6.7e-47 192.6 135 74.1
Cpa.g.sc283.9 Carica papaya HOM05D004528 ORTHO05D005815 2.0e-46 191.0 205 54.1
BcaB03g16744 Brassica carinata HOM05D004528 ORTHO05D005815 3.3e-46 190.3 125 75.2
Hma1.2p1_0800F.1_g220100 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 7.0e-44 182.6 100 88.0
arahy.Tifrunner.gnm1.ann1.43843R Arachis hypogaea HOM05D004528 ORTHO05D005815 2.1e-40 171.0 118 72.0
Zm00001eb311810 Zea mays HOM05D004528 ORTHO05D005815 1.8e-39 167.9 100 79.0
CBR_g78884 Chara braunii HOM05D004528 ORTHO05D005815 3.3e-38 163.7 185 45.4
MD15G1352000 Malus domestica HOM05D004528 ORTHO05D005815 1.8e-36 157.9 170 54.7
arahy.Tifrunner.gnm1.ann1.VVLB7Q Arachis hypogaea HOM05D004528 ORTHO05D005815 2.4e-36 157.5 104 75.0
CARHR054270 Cardamine hirsuta HOM05D004528 ORTHO05D005815 5.3e-36 156.4 101 74.3
ATR0026G010 Amborella trichopoda HOM05D004528 ORTHO05D005815 1.8e-31 141.4 80 81.2
CARHR052790 Cardamine hirsuta HOM05D004528 ORTHO05D005815 3.7e-29 133.7 138 55.1
arahy.Tifrunner.gnm1.ann1.DFU5EN Arachis hypogaea HOM05D004528 ORTHO05D005815 1.8e-28 131.3 85 75.3
PGSC0003DMG400022053 Solanum tuberosum HOM05D004528 ORTHO05D005815 3.5e-27 127.1 70 84.3
CARHR052830 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.3e-26 124.4 79 73.4
ATR0026G011 Amborella trichopoda HOM05D004528 ORTHO05D005815 1.1e-25 122.1 108 57.4
CARHR051750 Cardamine hirsuta HOM05D004528 ORTHO05D005815 7.0e-20 102.8 94 59.6
Oeu046566.1 Olea europaea HOM05D016390 ORTHO05D287481 2.0e-19 101.3 184 38.6
CARHR122320 Cardamine hirsuta HOM05D004528 ORTHO05D005815 4.5e-19 100.1 111 55.0
MCO16G315 Micromonas commoda HOM05D004528 ORTHO05D005815 4.3e-17 93.6 158 31.6
CARHR122310 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.1e-16 91.3 56 76.8
Sopen12g027230 Solanum pennellii HOM05D004528 ORTHO05D051045 7.5e-14 82.8 151 41.1
PRCOL_00001383 Prasinoderma coloniale HOM05D004528 ORTHO05D005815 7.0e-12 76.3 168 31.5
Cre02.g110400 Chlamydomonas reinhardtii HOM05D004528 ORTHO05D005815 1.2e-11 75.5 149 32.2
Ca_30052_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 1.1e-09 68.9 40 77.5
arahy.Tifrunner.gnm1.ann1.1S90RN Arachis hypogaea HOM05D004528 ORTHO05D005815 1.9e-09 68.2 58 63.8
Sp2g03965 Schrenkiella parvula HOM05D004528 ORTHO05D005815 7.3e-09 66.2 62 56.5
Oeu016244.1 Olea europaea HOM05D016390 ORTHO05D292239 4.7e-08 63.5 117 39.3
arahy.Tifrunner.gnm1.ann1.UXE40S Arachis hypogaea HOM05D004528 ORTHO05D005815 1.8e-07 61.6 87 44.8
Oeu032640.1 Olea europaea HOM05D016390 ORTHO05D287546 2.0e-06 58.2 121 33.1
CARHR051760 Cardamine hirsuta HOM05D004528 ORTHO05D005815 4.4e-06 57.0 37 70.3


User provided reference genes

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