Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016012.1 Olea europaea HOM05D002561 ORTHO05D006466 3.5e-49 198.0 101 100.0
MSTRG.15131 Avicennia marina HOM05D002561 ORTHO05D006466 1.9e-42 175.6 91 95.6
Migut.D00238 Erythranthe guttata HOM05D002561 ORTHO05D006466 1.9e-42 175.6 91 94.5
Actinidia11101 Actinidia chinensis HOM05D002561 ORTHO05D006466 5.5e-42 174.1 91 93.4
Dinv07536 Davidia involucrata HOM05D002561 ORTHO05D006466 7.1e-42 173.7 91 92.3
Dinv10164 Davidia involucrata HOM05D002561 ORTHO05D006466 7.1e-42 173.7 91 92.3
CANSAT64G1696 Cannabis sativa HOM05D002561 ORTHO05D006466 2.7e-41 171.8 91 92.3
CAN.G209.6 Capsicum annuum HOM05D002561 ORTHO05D006466 2.7e-41 171.8 91 91.2
Peaxi162Scf00845g00022 Petunia axillaris HOM05D002561 ORTHO05D006466 2.7e-41 171.8 91 91.2
TAR624G0407 Trochodendron aralioides HOM05D002561 ORTHO05D006466 2.7e-41 171.8 91 92.3
Cc05_g07670 Coffea canephora HOM05D002561 ORTHO05D006466 3.5e-41 171.4 91 92.3
Eucgr.K01052 Eucalyptus grandis HOM05D002561 ORTHO05D006466 3.5e-41 171.4 91 90.1
MBI07_g29117_MAGBIO Magnolia biondii HOM05D002561 ORTHO05D006466 3.5e-41 171.4 91 92.3
Nitab4.5_0000621g0150 Nicotiana tabacum HOM05D002561 ORTHO05D006466 3.5e-41 171.4 91 90.1
PGR142G4043 Punica granatum HOM05D002561 ORTHO05D006466 3.5e-41 171.4 91 92.3
GSVIVG01020601001 Vitis vinifera HOM05D002561 ORTHO05D006466 3.5e-41 171.4 91 91.2
CSS0024007 Camellia sinensis var. sinensis HOM05D002561 ORTHO05D006466 4.6e-41 171.0 91 89.0
ClCG02G002370 Citrullus lanatus HOM05D002561 ORTHO05D006466 4.6e-41 171.0 91 91.2
Rhsim06G0138000 Rhododendron simsii HOM05D002561 ORTHO05D006466 1.0e-40 169.9 91 90.1
Potri.007G137300 Populus trichocarpa HOM05D002561 ORTHO05D006466 1.3e-40 169.5 91 92.3
Potri.017G014700 Populus trichocarpa HOM05D002561 ORTHO05D006466 1.3e-40 169.5 91 92.3
vmacro12361 Vaccinium macrocarpon HOM05D002561 ORTHO05D006466 1.8e-40 169.1 91 90.1
Ah.03g138410 Amaranthus hybridus HOM05D002561 ORTHO05D006466 2.3e-40 168.7 91 91.2
EL10Ac9g20811 Beta vulgaris HOM05D002561 ORTHO05D006466 2.3e-40 168.7 91 89.0
Nitab4.5_0004546g0040 Nicotiana tabacum HOM05D002561 ORTHO05D006466 2.3e-40 168.7 91 87.9
Cfa014656 Carpinus fangiana HOM05D002561 ORTHO05D006466 3.0e-40 168.3 91 89.0
Haze_13235 Corylus avellana HOM05D002561 ORTHO05D006466 3.0e-40 168.3 91 89.0
Haze_13238 Corylus avellana HOM05D002561 ORTHO05D006466 3.0e-40 168.3 91 89.0
Sed0023046 Sechium edule HOM05D002561 ORTHO05D006466 3.0e-40 168.3 91 89.0
Hma1.2p1_0002F.1_g002200 Hydrangea macrophylla HOM05D002561 ORTHO05D006466 3.9e-40 167.9 91 89.0
CiPaw.03G181000 Carya illinoinensis HOM05D002561 ORTHO05D006466 5.1e-40 167.5 91 90.1
Manes.13G142500 Manihot esculenta HOM05D002561 ORTHO05D006466 5.1e-40 167.5 91 90.1
PGSC0003DMG401009395 Solanum tuberosum HOM05D002561 ORTHO05D006466 5.1e-40 167.5 91 87.9
SGA_v2.0_scaffold70G23496 Striga asiatica HOM05D002561 ORTHO05D006466 6.7e-40 167.2 91 91.2
MELO3C018869.2 Cucumis melo HOM05D002561 ORTHO05D006466 8.7e-40 166.8 91 89.0
CsaV3_7G003080 Cucumis sativus L. HOM05D002561 ORTHO05D006466 1.1e-39 166.4 91 87.9
HanXRQChr05g0140561 Helianthus annuus HOM05D002561 ORTHO05D006466 1.1e-39 166.4 91 86.8
Nn1g06426 Nelumbo nucifera HOM05D002561 ORTHO05D006466 1.1e-39 166.4 91 89.0
Hund07915 Selenicereus undatus HOM05D002561 ORTHO05D006466 1.1e-39 166.4 91 87.9
TWI59G1106 Tripterygium wilfordii HOM05D002561 ORTHO05D006466 1.1e-39 166.4 91 89.0
Solyc07g053660.3 Solanum lycopersicum HOM05D002561 ORTHO05D006466 1.5e-39 166.0 91 86.8
Sopen07g027630 Solanum pennellii HOM05D002561 ORTHO05D006466 1.5e-39 166.0 91 86.8
Lsat_1_v5_gn_4_64440 Lactuca sativa HOM05D002561 ORTHO05D006466 1.9e-39 165.6 91 86.8
CDE03G0236 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 2.5e-39 165.2 91 86.8
Sabra17G0011900 Salix brachista HOM05D002561 ORTHO05D006466 2.5e-39 165.2 91 90.1
TWI14G0319 Tripterygium wilfordii HOM05D002561 ORTHO05D006466 2.5e-39 165.2 91 87.9
COL.COLO4_28034 Corchorus olitorius HOM05D002561 ORTHO05D006466 4.3e-39 164.5 91 89.0
Lj8C108T5 Lonicera japonica HOM05D002561 ORTHO05D006466 5.7e-39 164.1 91 87.9
ECA240G2497 Erigeron canadensis HOM05D002561 ORTHO05D006466 7.4e-39 163.7 91 84.6
Medtr1g022960 Medicago truncatula HOM05D002561 ORTHO05D006466 7.4e-39 163.7 91 87.9
Thecc.02G185400 Theobroma cacao HOM05D002561 ORTHO05D006466 7.4e-39 163.7 91 89.0
DCAR_013032 Daucus carota HOM05D002561 ORTHO05D006466 9.6e-39 163.3 91 86.8
ATR0665G052 Amborella trichopoda HOM05D002561 ORTHO05D006466 1.3e-38 162.9 91 85.7
Phvul.006G037700 Phaseolus vulgaris HOM05D002561 ORTHO05D006466 1.3e-38 162.9 91 86.8
arahy.Tifrunner.gnm1.ann1.TSZ6TX Arachis hypogaea HOM05D002561 ORTHO05D006466 1.6e-38 162.5 91 87.9
arahy.Tifrunner.gnm1.ann1.UE4GYS Arachis hypogaea HOM05D002561 ORTHO05D006466 1.6e-38 162.5 91 87.9
Os01g0238900 Oryza sativa ssp. japonica HOM05D002561 ORTHO05D006466 1.6e-38 162.5 91 86.8
Cpa.g.sc83.89 Carica papaya HOM05D002561 ORTHO05D006466 2.1e-38 162.2 96 84.4
Lalb_Chr25g0280621 Lupinus albus HOM05D002561 ORTHO05D006466 2.1e-38 162.2 91 87.9
Gohir.A03G154700 Gossypium hirsutum HOM05D002561 ORTHO05D006466 2.8e-38 161.8 91 87.9
Gohir.D02G177700 Gossypium hirsutum HOM05D002561 ORTHO05D006466 2.8e-38 161.8 91 87.9
Gorai.005G199500 Gossypium raimondii HOM05D002561 ORTHO05D006466 2.8e-38 161.8 91 87.9
Zm00001eb064830 Zea mays HOM05D002561 ORTHO05D006466 3.7e-38 161.4 91 84.6
MD08G1220200 Malus domestica HOM05D002561 ORTHO05D006466 4.8e-38 161.0 91 84.6
Sc24g0000990 Simmondsia chinensis HOM05D002561 ORTHO05D006466 4.8e-38 161.0 91 85.7
Duzib052G0349 Durio zibethinus HOM05D002561 ORTHO05D006466 6.3e-38 160.6 91 86.8
THA.LOC104804051 Tarenaya hassleriana HOM05D002561 ORTHO05D006466 6.3e-38 160.6 91 87.9
Prupe.6G177000 Prunus persica HOM05D002561 ORTHO05D006466 8.2e-38 160.2 91 83.5
Lj3g0012051 Lotus japonicus HOM05D002561 ORTHO05D006466 1.4e-37 159.5 91 89.0
Glyma.02G251700 Glycine max HOM05D002561 ORTHO05D006466 1.8e-37 159.1 91 84.6
MD15G1410600 Malus domestica HOM05D002561 ORTHO05D006466 1.8e-37 159.1 91 83.5
Sc04g0004770 Simmondsia chinensis HOM05D002561 ORTHO05D006466 2.4e-37 158.7 97 78.4
HPP92_000278 Vanilla planifolia HOM05D002561 ORTHO05D006466 3.1e-37 158.3 91 82.4
Ciclev10015209m.g Citrus clementina HOM05D002561 ORTHO05D006466 5.3e-37 157.5 91 83.5
FAN20G3107 Fragaria x ananassa HOM05D002561 ORTHO05D006466 5.3e-37 157.5 91 82.4
FAN27G0984 Fragaria x ananassa HOM05D002561 ORTHO05D006466 9.0e-37 156.8 91 82.4
PSO782G0979 Papaver somniferum HOM05D002561 ORTHO05D006466 9.0e-37 156.8 91 83.5
FvH4_2g10410 Fragaria vesca HOM05D002561 ORTHO05D006466 1.2e-36 156.4 91 81.3
FAN24G2704 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.2e-36 156.4 91 81.3
Psat6g009760 Pisum sativum HOM05D002561 ORTHO05D006466 1.2e-36 156.4 91 86.8
Prupe.1G573700 Prunus persica HOM05D002561 ORTHO05D006466 1.2e-36 156.4 91 81.3
RcHm_v2.0_Chr6g0267881 Rosa chinensis HOM05D002561 ORTHO05D006466 1.2e-36 156.4 91 83.5
PSO210G7210 Papaver somniferum HOM05D002561 ORTHO05D006466 7.6e-36 153.7 91 83.5
PSO832G1390 Papaver somniferum HOM05D002561 ORTHO05D006466 7.6e-36 153.7 91 83.5
Sc21g0003230 Simmondsia chinensis HOM05D002561 ORTHO05D006466 7.6e-36 153.7 89 83.1
FAN15G2087 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.3e-35 152.9 89 80.9
Aa31LG2G21970 Aethionema arabicum HOM05D002561 ORTHO05D006466 2.2e-35 152.1 91 81.3
CARHR236220 Cardamine hirsuta HOM05D002561 ORTHO05D006466 2.2e-35 152.1 91 81.3
Sp7g26430 Schrenkiella parvula HOM05D002561 ORTHO05D006466 2.9e-35 151.8 91 81.3
Sc04g0004740 Simmondsia chinensis HOM05D002561 ORTHO05D006466 1.1e-34 149.8 89 80.9
QL08p040074 Quercus lobata HOM05D002561 ORTHO05D006466 1.4e-34 149.4 91 81.3
Carub.0007s1225 Capsella rubella HOM05D002561 ORTHO05D006466 1.9e-34 149.1 91 79.1
BcaC06g32621 Brassica carinata HOM05D002561 ORTHO05D006466 2.5e-34 148.7 91 78.0
A03p58100 Brassica napus HOM05D002561 ORTHO05D006466 2.5e-34 148.7 91 78.0
C07p56220 Brassica napus HOM05D002561 ORTHO05D006466 2.5e-34 148.7 91 78.0
BolC7t46099H Brassica oleracea HOM05D002561 ORTHO05D006466 2.5e-34 148.7 91 78.0
BraA03t14876Z Brassica rapa HOM05D002561 ORTHO05D006466 2.5e-34 148.7 91 78.0
AL7G24110 Arabidopsis lyrata HOM05D002561 ORTHO05D006466 3.2e-34 148.3 91 78.0
AT4G28450 Arabidopsis thaliana HOM05D002561 ORTHO05D006466 3.2e-34 148.3 91 78.0
TPR.G30494 Trifolium pratense HOM05D002561 ORTHO05D006466 4.2e-34 147.9 93 78.5
Thhalv10025176m.g Eutrema salsugineum HOM05D002561 ORTHO05D006466 5.5e-34 147.5 91 80.2
unitig_85.g27364 Utricularia gibba HOM05D002561 ORTHO05D006466 4.8e-30 134.4 69 91.3
Pp3c9_6000 Physcomitrium patens HOM05D002561 ORTHO05D006466 1.1e-29 133.3 91 70.3
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 1.4e-29 132.9 70 87.1
Sabra07G0110300 Salix brachista HOM05D002292 ORTHO05D003256 1.8e-29 132.5 70 90.0
Mapoly0143s0027 Marchantia polymorpha HOM05D002561 ORTHO05D006466 5.3e-29 131.0 91 71.4
Atru.chr6.2875 Acer truncatum HOM05D002561 ORTHO05D006466 6.9e-29 130.6 70 87.1
SMO347G0106 Selaginella moellendorffii HOM05D002561 ORTHO05D006466 7.7e-28 127.1 91 68.1
Ca_13381_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 1.0e-27 126.7 70 84.3
Ca_30047_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 1.0e-27 126.7 70 84.3
CBR_g34460 Chara braunii HOM05D002561 ORTHO05D006466 5.0e-27 124.4 89 67.4
TPR.G22970 Trifolium pratense HOM05D002561 ORTHO05D006466 4.2e-26 121.3 69 82.6
AagrBONN_evm.TU.Sc2ySwM_117.187 Anthoceros agrestis HOM05D002561 ORTHO05D006466 1.2e-25 119.8 91 60.4
Aqoxy4G00646 Aquilegia oxysepala HOM05D002561 ORTHO05D006466 5.1e-24 114.4 91 58.2
Cre07.g318702 Chlamydomonas reinhardtii HOM05D002561 ORTHO05D006466 3.3e-23 111.7 91 61.5
MCO01G363 Micromonas commoda HOM05D002561 ORTHO05D006466 2.4e-21 105.5 91 54.9
AUR62025466 Chenopodium quinoa HOM05D002561 ORTHO05D006466 5.0e-19 97.8 91 59.3
PRCOL_00005495 Prasinoderma coloniale HOM05D002561 ORTHO05D006466 1.2e-17 93.2 89 53.9
BcaB03g16272 Brassica carinata HOM05D002561 ORTHO05D006466 6.1e-17 90.9 54 77.8
FAN07G1962 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.4e-16 89.7 97 50.5
AUR62008772 Chenopodium quinoa HOM05D002561 ORTHO05D006466 9.7e-15 83.6 48 77.1
Actinidia11004 Actinidia chinensis HOM05D002561 ORTHO05D006466 6.1e-09 64.3 30 90.0
TAR626G1404 Trochodendron aralioides HOM05D002561 ORTHO05D006466 3.0e-08 62.0 30 80.0


User provided reference genes

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