Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 3.3e-311 1070.8 541 100.0
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 1.8e-253 879.0 517 84.3
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 3.4e-247 858.2 517 81.6
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 9.8e-247 856.7 517 81.4
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 3.3e-242 841.6 517 80.3
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 1.2e-241 839.7 494 83.8
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 6.8e-240 833.9 520 79.8
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 1.5e-239 832.8 517 79.9
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 1.5e-239 832.8 517 79.9
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 5.8e-239 830.9 514 79.8
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.3e-238 829.7 517 80.5
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.7e-238 829.3 517 80.5
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 1.1e-237 826.6 517 79.3
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 1.9e-237 825.9 518 79.3
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 9.2e-237 823.5 517 78.7
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 2.7e-236 822.0 521 79.5
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 6.6e-235 817.4 517 79.3
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 3.3e-234 815.1 494 81.2
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 2.8e-233 812.0 517 77.2
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 4.7e-233 811.2 514 78.6
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 1.8e-232 809.3 517 77.0
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 1.2e-231 806.6 517 77.4
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 1.5e-231 806.2 494 80.0
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 2.9e-230 802.0 494 79.6
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 1.1e-229 800.0 494 79.1
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 1.1e-229 800.0 517 76.6
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 3.2e-229 798.5 493 79.7
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 9.2e-229 797.0 517 76.4
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 2.1e-228 795.8 557 73.8
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 1.0e-227 793.5 517 76.0
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 8.6e-227 790.4 521 75.4
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 1.9e-226 789.3 517 76.6
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 7.3e-226 787.3 512 76.0
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.6e-225 786.2 520 76.9
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 3.6e-225 785.0 520 77.1
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 6.2e-225 784.3 520 76.7
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 1.8e-224 782.7 517 76.4
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 5.2e-224 781.2 514 76.1
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 1.2e-223 780.0 493 77.7
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 1.2e-223 780.0 514 76.3
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 1.5e-223 779.6 514 76.1
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 1.7e-222 776.2 517 74.9
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 2.2e-222 775.8 497 79.9
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 2.2e-222 775.8 514 75.9
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 4.9e-222 774.6 527 75.7
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 1.4e-221 773.1 517 74.5
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 1.4e-221 773.1 511 76.3
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 2.7e-220 768.8 513 75.0
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 1.0e-219 766.9 446 84.1
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.0e-219 766.9 545 73.6
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 2.3e-219 765.8 516 74.4
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 3.0e-219 765.4 516 74.6
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 8.6e-219 763.8 493 77.1
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 1.1e-216 756.9 438 83.6
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 1.1e-216 756.9 583 67.6
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 1.4e-216 756.5 470 79.6
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 4.4e-215 751.5 517 73.9
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 3.8e-214 748.4 440 82.0
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 6.4e-214 747.7 496 74.8
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 1.1e-213 746.9 494 75.3
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 3.2e-213 745.3 533 71.5
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 9.3e-213 743.8 494 75.1
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 9.3e-213 743.8 459 79.5
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 2.1e-212 742.7 617 64.7
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 4.6e-212 741.5 516 72.9
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 1.9e-210 736.1 510 73.3
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 9.6e-210 733.8 516 73.4
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 9.6e-210 733.8 484 75.8
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 6.2e-209 731.1 527 70.2
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 6.2e-209 731.1 463 79.0
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 1.1e-208 730.3 606 65.5
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 1.1e-205 720.3 490 73.3
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 1.4e-205 719.9 494 73.3
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 1.4e-205 719.9 494 73.3
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 4.2e-205 718.4 495 72.3
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 2.7e-204 715.7 495 72.5
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 3.0e-203 712.2 494 72.1
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 7.4e-202 707.6 511 70.8
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 9.6e-202 707.2 511 70.8
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 8.1e-201 704.1 511 70.5
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 1.4e-200 703.4 493 71.6
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 4.0e-200 701.8 419 80.7
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 5.8e-199 698.0 521 70.2
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 2.7e-196 689.1 494 71.7
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 7.9e-196 687.6 495 70.7
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 3.9e-195 685.3 529 69.0
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 7.4e-194 681.0 495 69.3
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 2.2e-190 669.5 553 66.4
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 2.5e-189 666.0 430 77.4
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 4.6e-188 661.8 496 68.3
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 2.3e-187 659.4 573 62.1
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.1e-186 657.1 489 68.3
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 2.4e-184 649.4 648 56.2
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 9.1e-176 620.9 487 64.7
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 2.5e-173 612.8 434 69.8
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 4.5e-167 592.0 408 72.3
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.0e-166 590.9 507 60.4
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 3.2e-165 585.9 507 60.6
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 1.1e-160 570.9 464 63.6
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 1.8e-160 570.1 394 74.9
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 7.5e-138 495.0 360 69.2
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 2.2e-129 466.8 278 78.4
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 5.1e-102 375.9 469 46.7
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 5.1e-102 375.9 260 73.8
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 3.1e-99 366.7 223 79.8
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 3.6e-92 343.2 210 81.4
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 4.5e-90 336.3 187 88.8
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 3.8e-89 333.2 297 59.9
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 1.2e-87 328.2 187 85.6
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 2.7e-79 300.4 222 68.5
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 4.3e-77 293.1 238 65.5
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.0e-73 282.0 228 64.9
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 9.3e-72 275.4 159 95.6
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 1.9e-69 267.7 189 72.0
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 1.7e-65 254.6 400 37.8
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.0e-54 218.8 383 38.1
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 5.7e-53 213.0 116 83.6
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 3.2e-48 197.2 184 59.2
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 2.6e-42 177.6 189 56.1
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 9.4e-40 169.1 109 67.0
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 1.4e-35 155.2 174 54.6
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 9.1e-27 125.9 66 83.3
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 9.5e-24 115.9 267 29.6
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 3.0e-09 67.8 38 81.6
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 1.5e-08 65.5 34 85.3


User provided reference genes

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