Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014331.2 Olea europaea HOM05D004256 ORTHO05D005224 0.0e+00 1555.8 798 100.0
Oeu021898.3 Olea europaea HOM05D004256 ORTHO05D005224 0.0e+00 1156.7 723 84.0
Dinv11058 Davidia involucrata HOM05D004256 ORTHO05D005224 2.9e-279 965.3 818 62.7
Cc09_g07800 Coffea canephora HOM05D004256 ORTHO05D005224 3.1e-265 918.7 824 59.3
SalBow7G4118 Salvia bowleyana HOM05D004256 ORTHO05D005224 2.7e-261 905.6 824 58.9
TAR627G0580 Trochodendron aralioides HOM05D004256 ORTHO05D005224 1.3e-260 903.3 816 58.7
GSVIVG01021670001 Vitis vinifera HOM05D004256 ORTHO05D005224 2.3e-260 902.5 806 59.1
Solyc02g070030.4 Solanum lycopersicum HOM05D004256 ORTHO05D005224 4.3e-259 898.3 826 60.0
Nitab4.5_0001225g0210 Nicotiana tabacum HOM05D004256 ORTHO05D005224 5.7e-259 897.9 832 59.1
Peaxi162Scf00670g00215 Petunia axillaris HOM05D004256 ORTHO05D005224 8.2e-258 894.0 838 58.8
Sopen02g019190 Solanum pennellii HOM05D004256 ORTHO05D005224 1.2e-256 890.2 826 59.6
CAN.G79.16 Capsicum annuum HOM05D004256 ORTHO05D005224 1.3e-255 886.7 824 58.9
Migut.H01323 Erythranthe guttata HOM05D004256 ORTHO05D005224 1.3e-255 886.7 810 59.4
Atru.chr10.795 Acer truncatum HOM05D004256 ORTHO05D005224 4.6e-253 878.2 831 57.4
Potri.001G465500 Populus trichocarpa HOM05D004256 ORTHO05D005224 1.3e-252 876.7 835 56.5
QL05p062735 Quercus lobata HOM05D004256 ORTHO05D005224 1.8e-252 876.3 834 55.0
SGA_v2.0_scaffold106G30680 Striga asiatica HOM05D004256 ORTHO05D005224 2.5e-251 872.5 814 58.2
Sabra16G0315900 Salix brachista HOM05D004256 ORTHO05D005224 1.7e-250 869.8 834 56.1
Rhsim02G0162800 Rhododendron simsii HOM05D004256 ORTHO05D005224 1.4e-249 866.7 840 57.0
Prupe.4G091400 Prunus persica HOM05D004256 ORTHO05D005224 2.4e-249 865.9 836 55.9
Ciclev10014179m.g Citrus clementina HOM05D004256 ORTHO05D005224 1.5e-248 863.2 827 56.2
MD10G1252200 Malus domestica HOM05D004256 ORTHO05D005224 2.2e-247 859.4 830 55.7
RcHm_v2.0_Chr5g0016471 Rosa chinensis HOM05D004256 ORTHO05D005224 1.4e-246 856.7 847 55.1
MD05G1271600 Malus domestica HOM05D004256 ORTHO05D005224 5.5e-246 854.7 835 55.7
COL.COLO4_26853 Corchorus olitorius HOM05D004256 ORTHO05D005224 7.2e-246 854.4 834 56.0
CiPaw.09G142400 Carya illinoinensis HOM05D004256 ORTHO05D005224 3.6e-245 852.0 841 53.7
Cfa004790 Carpinus fangiana HOM05D004256 ORTHO05D005224 1.4e-244 850.1 830 54.8
DCAR_003847 Daucus carota HOM05D004256 ORTHO05D005224 3.4e-240 835.5 849 53.9
TWI38G1119 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 3.4e-240 835.5 818 54.5
FvH4_3g10230 Fragaria vesca HOM05D004256 ORTHO05D005224 2.2e-239 832.8 847 54.1
TWI63G0578 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 3.8e-239 832.0 829 54.0
FAN21G3884 Fragaria x ananassa HOM05D004256 ORTHO05D005224 8.5e-239 830.9 846 54.0
Manes.06G068000 Manihot esculenta HOM05D004256 ORTHO05D005224 4.2e-238 828.6 830 53.6
Thecc.06G004200 Theobroma cacao HOM05D004256 ORTHO05D005224 1.2e-237 827.0 830 54.3
FAN16G0878 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.1e-237 826.2 864 53.1
MBI02_g25367_MAGBIO Magnolia biondii HOM05D004256 ORTHO05D005224 2.7e-237 825.9 835 54.0
Nitab4.5_0001583g0180 Nicotiana tabacum HOM05D004256 ORTHO05D005224 4.7e-237 825.1 828 55.4
Eucgr.K01946 Eucalyptus grandis HOM05D004256 ORTHO05D005224 1.4e-236 823.5 828 53.5
Lalb_Chr13g0291451 Lupinus albus HOM05D004256 ORTHO05D005224 9.7e-235 817.4 808 54.7
Duzib192G0446 Durio zibethinus HOM05D004256 ORTHO05D005224 1.4e-233 813.5 829 53.9
arahy.Tifrunner.gnm1.ann1.71MGM7 Arachis hypogaea HOM05D004256 ORTHO05D005224 3.2e-230 802.4 824 51.6
Gohir.A06G119600 Gossypium hirsutum HOM05D004256 ORTHO05D005224 1.6e-229 800.0 830 53.7
MELO3C002826.2 Cucumis melo HOM05D004256 ORTHO05D005224 1.8e-228 796.6 835 52.1
Gorai.010G144100 Gossypium raimondii HOM05D004256 ORTHO05D005224 3.0e-228 795.8 816 54.4
Lalb_Chr12g0208801 Lupinus albus HOM05D004256 ORTHO05D005224 8.8e-228 794.3 812 53.4
CsaV3_1G037200 Cucumis sativus L. HOM05D004256 ORTHO05D005224 2.6e-227 792.7 835 52.1
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 4.4e-227 792.0 823 51.2
PGR031G3593 Punica granatum HOM05D004256 ORTHO05D005224 7.5e-227 791.2 833 52.8
ClCG03G008210 Citrullus lanatus HOM05D004256 ORTHO05D005224 1.1e-225 787.3 830 51.8
TPR.G30378 Trifolium pratense HOM05D004256 ORTHO05D005224 2.4e-225 786.2 829 52.8
Aqoxy5G02462 Aquilegia oxysepala HOM05D004256 ORTHO05D005224 4.1e-225 785.4 831 52.7
FAN11G3535 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.2e-224 783.9 894 50.2
Phvul.002G198200 Phaseolus vulgaris HOM05D004256 ORTHO05D005224 2.7e-224 782.7 826 52.3
Medtr4g094545 Medicago truncatula HOM05D004256 ORTHO05D005224 1.1e-222 777.3 830 52.5
Lj4g0013937 Lotus japonicus HOM05D004256 ORTHO05D005224 1.5e-222 776.9 823 52.2
Lj1A1161T63 Lonicera japonica HOM05D004256 ORTHO05D005224 8.0e-221 771.2 811 53.5
Lsat_1_v5_gn_7_34341 Lactuca sativa HOM05D004256 ORTHO05D005224 2.3e-220 769.6 796 54.3
ECA236G4703 Erigeron canadensis HOM05D004256 ORTHO05D005224 4.0e-220 768.8 802 53.2
PSO675G2772 Papaver somniferum HOM05D004256 ORTHO05D005224 4.0e-220 768.8 826 51.8
Glyma.05G126600 Glycine max HOM05D004256 ORTHO05D005224 2.0e-219 766.5 828 52.3
HanXRQChr04g0117221 Helianthus annuus HOM05D004256 ORTHO05D005224 2.6e-219 766.1 798 54.8
Glyma.08G081600 Glycine max HOM05D004256 ORTHO05D005224 7.5e-219 764.6 826 51.6
CANSAT35G1931 Cannabis sativa HOM05D004256 ORTHO05D005224 2.8e-218 762.7 832 51.1
Ca_18290_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 1.1e-217 760.8 846 51.7
Nn2g15522 Nelumbo nucifera HOM05D004256 ORTHO05D005224 3.5e-216 755.7 841 50.9
EL10Ac8g19544 Beta vulgaris HOM05D004256 ORTHO05D005224 8.6e-215 751.1 833 49.0
THA.LOC104812246 Tarenaya hassleriana HOM05D004256 ORTHO05D005224 1.2e-213 747.3 833 49.9
Psat7g093560 Pisum sativum HOM05D004256 ORTHO05D005224 8.0e-213 744.6 869 48.8
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 3.7e-210 735.7 844 48.5
Ah.14g086130 Amaranthus hybridus HOM05D004256 ORTHO05D005224 2.3e-207 726.5 831 49.1
Aa31LG6G2980 Aethionema arabicum HOM05D004256 ORTHO05D005224 5.6e-198 695.3 838 48.7
Os07g0164000 Oryza sativa ssp. japonica HOM05D004256 ORTHO05D005224 3.7e-194 682.6 806 46.5
Dinv16826 Davidia involucrata HOM05D004256 ORTHO05D005224 5.0e-191 672.2 662 56.6
HPP92_009410 Vanilla planifolia HOM05D004256 ORTHO05D005224 2.5e-190 669.8 834 46.9
Potri.011G163600 Populus trichocarpa HOM05D004256 ORTHO05D005224 3.6e-189 666.0 684 54.1
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 3.1e-188 662.9 566 62.4
Zm00001eb300700 Zea mays HOM05D004256 ORTHO05D005224 5.2e-188 662.1 820 45.9
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.9e-188 661.4 566 62.4
AL7G33240 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 1.5e-187 660.6 858 45.8
BolC1t01426H Brassica oleracea HOM05D004256 ORTHO05D005224 4.9e-186 655.6 852 45.1
C01p14740 Brassica napus HOM05D004256 ORTHO05D005224 8.3e-186 654.8 852 45.1
AT4G20910 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 1.9e-185 653.7 854 45.6
Thhalv10024326m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 4.1e-185 652.5 854 45.3
Carub.0007s2052 Capsella rubella HOM05D004256 ORTHO05D005224 2.1e-184 650.2 860 45.0
Eucgr.L00874 Eucalyptus grandis HOM05D004256 ORTHO05D005224 4.6e-184 649.0 689 51.4
A01p12320 Brassica napus HOM05D004256 ORTHO05D005224 8.6e-183 644.8 836 45.2
Sp7g19000 Schrenkiella parvula HOM05D004256 ORTHO05D005224 6.2e-181 638.6 827 45.2
CARHR227470 Cardamine hirsuta HOM05D004256 ORTHO05D005224 8.9e-180 634.8 834 46.0
Carub.0007s2051 Capsella rubella HOM05D004256 ORTHO05D005224 2.9e-178 629.8 829 44.3
BraA01t01176Z Brassica rapa HOM05D004256 ORTHO05D005224 8.4e-178 628.2 885 43.2
Gohir.D06G123900 Gossypium hirsutum HOM05D004256 ORTHO05D005224 7.8e-176 621.7 692 51.2
AL7G33230 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 3.1e-172 609.8 840 43.3
BraA01t01178Z Brassica rapa HOM05D004256 ORTHO05D005224 3.8e-170 602.8 854 43.1
Thhalv10024347m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 3.8e-170 602.8 850 44.0
BcaC09g51291 Brassica carinata HOM05D004256 ORTHO05D005224 5.4e-169 599.0 854 43.1
BolC1t01428H Brassica oleracea HOM05D004256 ORTHO05D005224 9.3e-169 598.2 856 43.2
C01p14750 Brassica napus HOM05D004256 ORTHO05D005224 1.3e-167 594.3 855 43.0
ATR1098G117 Amborella trichopoda HOM05D004256 ORTHO05D005224 2.5e-166 590.1 839 41.5
BcaB03g11710 Brassica carinata HOM05D004256 ORTHO05D005224 4.3e-166 589.3 921 40.3
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 9.3e-161 571.6 810 44.2
FAN18G3233 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.7e-154 550.8 728 45.6
FAN18G2742 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.8e-149 533.5 748 43.2
Sed0001829 Sechium edule HOM05D004256 ORTHO05D005224 1.5e-142 511.1 601 48.3
Actinidia31384 Actinidia chinensis HOM05D004256 ORTHO05D005224 2.5e-134 483.8 520 53.3
Hma1.2p1_2369F.1_g320760 Hydrangea macrophylla HOM05D004256 ORTHO05D005224 4.7e-128 463.0 465 56.3
CARHR227480 Cardamine hirsuta HOM05D004256 ORTHO05D005224 2.6e-123 447.2 698 41.0
unitig_0.g923 Utricularia gibba HOM05D004256 ORTHO05D005224 3.5e-123 446.8 725 41.4
FAN13G2402 Fragaria x ananassa HOM05D004256 ORTHO05D005224 6.1e-120 436.0 648 41.5
SMO165G0118 Selaginella moellendorffii HOM05D004256 ORTHO05D005224 8.0e-120 435.6 845 35.7
Mapoly0004s0071 Marchantia polymorpha HOM05D004256 ORTHO05D005224 2.6e-118 430.6 927 33.8
Sc17g0004590 Simmondsia chinensis HOM05D004256 ORTHO05D005224 3.1e-116 423.7 552 44.0
AagrBONN_evm.TU.Sc2ySwM_117.1656 Anthoceros agrestis HOM05D004256 ORTHO05D005224 9.1e-116 422.2 835 35.4
AT4G20920 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 1.0e-111 408.7 670 39.7
Pp3c1_60 Physcomitrium patens HOM05D004256 ORTHO05D005224 3.0e-111 407.1 878 33.4
AUR62043099 Chenopodium quinoa HOM05D004256 ORTHO05D005224 9.1e-108 395.6 543 41.8
AUR62034030 Chenopodium quinoa HOM05D004256 ORTHO05D005224 4.5e-107 393.3 542 41.9
Actinidia31383 Actinidia chinensis HOM05D004256 ORTHO05D005224 2.7e-99 367.5 253 73.5
Zm00001eb161380 Zea mays HOM05D004256 ORTHO05D005224 1.4e-95 355.1 585 39.0
BcaC09g51292 Brassica carinata HOM05D004256 ORTHO05D005224 3.0e-95 354.0 577 39.3
CDE02G0763 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 4.4e-94 350.1 582 38.3
BraA01t01177Z Brassica rapa HOM05D004256 ORTHO05D005224 1.3e-93 348.6 576 39.2
Haze_10384 Corylus avellana HOM05D004256 ORTHO05D005224 1.3e-93 348.6 501 42.3
Haze_10386 Corylus avellana HOM05D004256 ORTHO05D005224 1.3e-93 348.6 503 42.1
Sc17g0004580 Simmondsia chinensis HOM05D004256 ORTHO05D005224 2.0e-91 341.3 259 67.2
FAN08G1809 Fragaria x ananassa HOM05D004256 ORTHO05D005224 8.0e-88 329.3 405 44.4
FAN04G0519 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.7e-85 321.6 442 41.2
Sp7g19005 Schrenkiella parvula HOM05D004256 ORTHO05D005224 1.7e-82 311.6 567 36.9
CSS0013637 Camellia sinensis var. sinensis HOM05D004256 ORTHO05D005224 1.2e-72 278.9 238 60.9
FAN08G3148 Fragaria x ananassa HOM05D004256 ORTHO05D005224 4.4e-70 270.4 409 42.8
Haze_10382 Corylus avellana HOM05D004256 ORTHO05D005224 3.6e-64 250.8 532 35.7
CBR_g29910 Chara braunii HOM05D000019 ORTHO05D005224 2.0e-62 245.0 1183 23.7
HanXRQChr04g0117231 Helianthus annuus HOM05D004256 ORTHO05D005224 3.4e-54 217.6 275 45.5
Dinv16824 Davidia involucrata HOM05D010983 ORTHO05D005224 5.8e-54 216.9 140 73.6
BcaC09g51294 Brassica carinata HOM05D004256 ORTHO05D005224 1.2e-43 182.6 137 63.5
Zm00001eb318270 Zea mays HOM05D004256 ORTHO05D005224 9.6e-41 172.9 299 36.8
BcaNung04718 Brassica carinata HOM05D004256 ORTHO05D005224 8.1e-40 169.9 233 41.2
SEGI_28315 Sequoiadendron giganteum HOM05D004256 ORTHO05D005224 2.4e-39 168.3 163 54.0
BolC1t01427H Brassica oleracea HOM05D004256 ORTHO05D005224 9.0e-39 166.4 244 41.0
Zm00001eb318280 Zea mays HOM05D004256 ORTHO05D005224 1.7e-29 135.6 144 53.5
CAN.G79.20 Capsicum annuum HOM05D004256 ORTHO05D005224 3.2e-28 131.3 115 55.7
Ca_18291_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 1.3e-26 125.9 105 61.9
Haze_10375 Corylus avellana HOM05D004256 ORTHO05D005224 1.1e-23 116.3 217 35.9
CDE02G4682 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 1.5e-22 112.5 153 40.5
BcaNung04717 Brassica carinata HOM05D004256 ORTHO05D005224 2.2e-21 108.6 369 28.2
Haze_01153 Corylus avellana HOM05D004256 ORTHO05D005224 2.9e-21 108.2 137 47.4
Zm00001eb357190 Zea mays HOM05D004256 ORTHO05D005224 8.5e-21 106.7 216 33.3
BcaC09g51293 Brassica carinata HOM05D004256 ORTHO05D005224 1.1e-20 106.3 122 44.3
Cre03.g191200 Chlamydomonas reinhardtii HOM05D004256 ORTHO05D005224 1.4e-20 105.9 281 29.2
PGSC0003DMG400021115 Solanum tuberosum HOM05D004256 ORTHO05D005224 3.6e-19 101.3 103 53.4
Actinidia33023 Actinidia chinensis HOM05D004256 ORTHO05D005224 5.1e-18 97.4 69 68.1
FAN25G0985 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.5e-14 85.9 92 45.7
SEGI_09964 Sequoiadendron giganteum HOM05D000070 ORTHO05D005224 3.4e-14 84.7 91 49.5
BcaC01g00730 Brassica carinata HOM05D004256 ORTHO05D005224 1.0e-13 83.2 91 44.0
arahy.Tifrunner.gnm1.ann1.2P4BCH Arachis hypogaea HOM05D004256 ORTHO05D005224 8.5e-13 80.1 229 27.5


User provided reference genes

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