Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 3.6e-172 608.2 318 100.0
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 4.1e-128 461.8 321 78.5
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 2.5e-125 452.6 311 79.7
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 5.8e-122 441.4 319 76.8
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 1.7e-121 439.9 272 83.8
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 1.4e-120 436.8 318 75.2
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 1.4e-120 436.8 319 74.3
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 1.4e-120 436.8 315 75.2
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 1.9e-120 436.4 270 85.2
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 9.2e-120 434.1 318 73.3
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 2.1e-119 433.0 295 79.7
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 7.8e-119 431.0 293 79.9
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 1.0e-118 430.6 322 71.7
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 1.7e-118 429.9 318 73.3
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 8.6e-118 427.6 267 81.6
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 1.5e-117 426.8 279 81.7
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 2.1e-116 422.9 319 71.5
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 2.8e-116 422.5 318 71.7
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 3.6e-116 422.2 318 71.4
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 4.7e-116 421.8 318 71.4
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 8.1e-116 421.0 318 70.4
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 2.4e-115 419.5 318 70.8
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 6.8e-115 417.9 318 71.7
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 1.5e-114 416.8 318 70.1
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 2.0e-114 416.4 305 72.1
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 2.6e-114 416.0 297 75.4
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 3.4e-114 415.6 320 71.2
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 3.8e-113 412.1 271 78.6
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 1.1e-112 410.6 318 71.1
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 2.4e-112 409.5 319 70.2
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 5.4e-112 408.3 290 73.8
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 5.4e-112 408.3 318 68.6
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 2.1e-111 406.4 319 68.3
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 6.0e-111 404.8 329 66.9
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 8.7e-110 401.0 326 69.9
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 1.1e-109 400.6 318 67.6
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 1.9e-109 399.8 306 69.6
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 2.5e-109 399.4 310 71.3
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 4.3e-109 398.7 293 72.4
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 4.3e-109 398.7 322 69.6
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 9.6e-109 397.5 390 59.2
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 8.1e-108 394.4 320 69.4
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 8.1e-108 394.4 282 70.9
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 1.1e-107 394.0 282 70.9
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 3.1e-107 392.5 264 78.0
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 5.2e-107 391.7 324 67.3
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 6.9e-107 391.3 291 70.4
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 9.0e-107 391.0 311 69.8
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 9.0e-107 391.0 319 66.8
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 1.5e-106 390.2 319 65.8
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 2.0e-106 389.8 249 81.9
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 3.4e-106 389.0 249 80.3
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 9.9e-106 387.5 297 71.4
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 1.7e-105 386.7 318 65.7
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 3.8e-105 385.6 318 65.4
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 4.9e-105 385.2 290 70.3
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 1.4e-104 383.6 274 73.0
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 2.4e-104 382.9 305 68.5
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 4.2e-104 382.1 318 66.4
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.6e-103 380.2 274 72.6
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 7.8e-103 377.9 246 78.0
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 8.7e-102 374.4 312 64.7
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 8.7e-102 374.4 322 67.4
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 1.9e-101 373.2 268 72.4
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 3.3e-101 372.5 234 82.1
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 5.6e-101 371.7 264 72.7
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 1.3e-100 370.5 252 74.2
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 2.1e-100 369.8 310 66.1
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 2.1e-100 369.8 272 72.1
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 2.1e-100 369.8 268 71.3
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 4.8e-100 368.6 274 70.8
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 2.4e-99 366.3 265 72.5
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 9.0e-99 364.4 321 62.3
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 2.6e-98 362.8 314 63.1
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 2.6e-98 362.8 274 69.3
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 2.6e-98 362.8 301 67.4
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 4.5e-98 362.1 310 64.5
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 9.9e-98 360.9 267 70.0
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 1.3e-97 360.5 312 64.7
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 4.2e-96 355.5 284 67.6
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 5.4e-96 355.1 252 73.8
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 9.3e-96 354.4 268 68.7
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 1.2e-95 354.0 284 67.3
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 1.6e-95 353.6 315 62.2
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 1.0e-94 350.9 289 65.4
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 1.3e-94 350.5 255 72.5
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 1.3e-94 350.5 319 61.4
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 5.6e-93 345.1 269 68.8
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 9.6e-93 344.4 311 64.6
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 5.3e-91 338.6 234 73.9
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 6.9e-91 338.2 320 57.2
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 1.2e-90 337.4 225 75.6
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 1.5e-90 337.0 228 76.8
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 3.4e-90 335.9 265 68.7
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 1.7e-89 333.6 228 72.8
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 3.2e-88 329.3 239 73.2
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 1.8e-86 323.6 185 85.9
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 9.6e-85 317.8 228 74.1
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 3.7e-84 315.8 249 64.7
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.1e-83 314.3 319 58.3
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 1.6e-79 300.4 266 63.5
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 6.0e-79 298.5 321 56.4
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 6.9e-75 285.0 296 56.8
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 2.1e-71 273.5 187 74.9
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 2.3e-70 270.0 257 56.4
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 9.7e-69 264.6 261 59.4
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 1.2e-66 257.7 173 76.9
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 2.0e-61 240.4 171 73.1
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 5.7e-61 238.8 253 51.0
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 1.1e-56 224.6 190 64.2
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 9.4e-56 221.5 251 50.2
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 5.2e-54 215.7 251 49.4
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 4.4e-45 186.0 152 67.1
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 4.1e-43 179.5 173 52.6
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 2.2e-41 173.7 128 66.4
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 2.7e-39 166.8 125 65.6
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 2.6e-37 160.2 188 54.8
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 1.3e-36 157.9 98 82.7
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 8.9e-30 135.2 120 65.8
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 4.4e-29 132.9 120 59.2
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 1.5e-24 117.9 237 37.1
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 3.6e-23 113.2 78 74.4
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 1.3e-20 104.8 101 56.4
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 1.6e-18 97.8 106 55.7
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 1.7e-17 94.4 68 60.3
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 8.0e-15 85.5 72 65.3
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 2.4e-11 73.9 65 67.7
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 2.7e-10 70.5 164 38.4
Lj9C654T3 Lonicera japonica HOM05D006016 ORTHO05D007553 6.6e-09 65.9 47 76.6
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 6.6e-09 65.9 181 33.7
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.5e-08 64.7 172 33.7
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 2.5e-08 63.9 35 71.4
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 4.3e-08 63.2 65 58.5
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 6.2e-07 59.3 62 58.1


User provided reference genes

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