Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 2.8e-185 651.7 321 100.0
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 8.7e-142 507.3 320 76.9
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 8.7e-142 507.3 320 76.9
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 1.5e-138 496.5 329 76.3
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 2.1e-135 486.1 321 74.1
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 1.0e-134 483.8 320 74.1
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 1.7e-134 483.0 326 74.2
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 3.9e-134 481.9 322 73.0
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 5.1e-134 481.5 310 77.1
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 1.3e-132 476.9 325 72.6
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 1.6e-132 476.5 343 70.6
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 2.1e-132 476.1 320 73.1
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 6.2e-132 474.6 320 73.8
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 4.9e-129 464.9 332 71.4
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 4.2e-128 461.8 319 71.8
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 2.1e-127 459.5 324 71.0
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 7.9e-127 457.6 331 69.2
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 1.3e-126 456.8 327 70.6
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 1.8e-126 456.4 325 69.5
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 3.0e-126 455.7 321 72.0
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 5.1e-126 454.9 342 66.7
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 6.7e-126 454.5 332 66.9
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 1.5e-125 453.4 364 64.6
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 2.5e-125 452.6 331 69.2
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 3.3e-125 452.2 341 67.7
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 3.3e-125 452.2 325 68.6
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 3.3e-125 452.2 338 67.2
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 3.3e-125 452.2 325 69.2
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 3.3e-125 452.2 325 69.2
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 5.6e-125 451.4 323 70.6
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 5.6e-125 451.4 317 70.7
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 9.6e-125 450.7 327 70.0
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 1.3e-124 450.3 319 69.9
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 3.7e-124 448.7 319 71.5
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 3.7e-124 448.7 351 65.5
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 4.8e-124 448.4 322 70.8
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 6.2e-124 448.0 336 65.5
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 1.1e-123 447.2 319 71.5
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 1.8e-123 446.4 336 67.3
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 2.4e-123 446.0 342 67.3
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 2.4e-123 446.0 319 69.9
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 2.4e-123 446.0 336 66.1
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 6.9e-123 444.5 324 68.2
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 6.9e-123 444.5 328 68.3
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 9.0e-123 444.1 326 68.4
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 2.6e-122 442.6 319 69.3
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 9.9e-122 440.7 322 68.6
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 9.9e-122 440.7 322 68.6
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 2.2e-121 439.5 325 69.5
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 2.9e-121 439.1 331 67.1
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 8.4e-121 437.6 331 66.2
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 8.4e-121 437.6 328 65.5
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 1.9e-120 436.4 301 70.1
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 1.9e-120 436.4 325 69.8
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 3.2e-120 435.6 333 67.0
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 3.2e-120 435.6 326 68.4
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 3.2e-120 435.6 335 66.6
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 4.2e-120 435.3 325 68.3
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 4.2e-120 435.3 340 65.6
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 5.5e-120 434.9 321 67.9
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 9.3e-120 434.1 324 69.4
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 1.6e-119 433.3 323 68.7
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 3.5e-119 432.2 323 66.3
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 7.9e-119 431.0 321 67.0
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 7.9e-119 431.0 321 67.0
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 7.9e-119 431.0 321 67.0
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 1.8e-118 429.9 323 68.7
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 3.0e-118 429.1 268 77.2
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 3.0e-118 429.1 323 67.8
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 3.0e-118 429.1 322 66.8
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 8.7e-118 427.6 349 63.6
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 4.3e-117 425.2 324 65.4
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 4.3e-117 425.2 324 65.4
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 4.3e-117 425.2 324 65.4
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 4.3e-117 425.2 278 73.4
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.3e-116 423.7 322 67.7
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 2.1e-116 422.9 277 73.3
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 2.1e-116 422.9 307 69.7
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 3.7e-116 422.2 341 61.3
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 8.2e-116 421.0 336 65.2
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 6.9e-115 417.9 315 67.3
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 1.2e-114 417.2 320 66.9
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 3.4e-114 415.6 341 63.6
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 1.0e-113 414.1 345 62.9
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 2.9e-113 412.5 240 80.0
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 4.9e-113 411.8 319 63.3
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 6.5e-113 411.4 286 70.3
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 7.1e-112 407.9 299 68.9
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 2.1e-111 406.4 297 69.4
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 2.7e-111 406.0 299 68.9
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 7.9e-111 404.4 297 69.0
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 2.5e-109 399.4 322 64.0
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 3.1e-107 392.5 301 67.4
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 9.0e-107 391.0 358 55.9
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 1.0e-105 387.5 310 64.5
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 2.2e-105 386.3 213 83.6
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 2.9e-105 386.0 273 65.2
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 1.9e-104 383.3 325 61.8
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 1.9e-104 383.3 267 64.8
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 4.2e-104 382.1 284 62.7
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 4.2e-104 382.1 293 67.9
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 9.4e-104 380.9 289 67.5
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 1.4e-102 377.1 277 66.4
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 1.3e-100 370.5 210 81.9
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 4.8e-100 368.6 210 82.9
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 1.8e-99 366.7 379 53.6
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 3.3e-93 345.9 275 63.6
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 1.3e-92 344.0 271 64.2
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 2.2e-89 333.2 290 58.6
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 1.6e-87 327.0 240 62.5
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 5.2e-86 322.0 320 54.4
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 2.0e-85 320.1 240 62.1
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 9.7e-85 317.8 231 63.2
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 8.5e-81 304.7 225 61.8
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 1.2e-79 300.8 212 72.2
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 1.4e-75 287.3 226 65.9
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 1.7e-73 280.4 226 64.2
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 3.0e-70 269.6 166 75.9
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 1.1e-67 261.2 293 47.1
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 8.0e-63 245.0 215 53.5
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 9.8e-61 238.0 232 56.0
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 6.1e-55 218.8 183 56.8
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 1.2e-53 214.5 220 49.1
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 1.7e-52 210.7 182 59.3
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 8.6e-49 198.4 109 83.5
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 2.1e-42 177.2 197 47.7
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 4.6e-42 176.0 119 71.4
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 7.8e-42 175.3 197 47.2
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.6e-39 167.5 197 45.2
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.7e-39 166.0 197 45.7
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 1.1e-38 164.9 100 74.0
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 1.2e-37 161.4 85 87.1
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 2.9e-36 156.8 97 79.4
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 4.1e-35 152.9 98 76.5
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 4.1e-35 152.9 251 36.3
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.3e-33 147.9 184 44.0
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.5e-29 134.4 197 37.6
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 5.8e-29 132.5 77 77.9
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.9e-27 127.5 218 32.6
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 7.1e-27 125.6 193 35.2
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 2.1e-26 124.0 164 45.7
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 2.7e-26 123.6 83 68.7
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.5e-26 123.2 196 36.7
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 7.8e-26 122.1 197 34.5
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 6.6e-25 119.0 138 47.8
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 9.9e-21 105.1 197 32.0
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 3.9e-17 93.2 180 31.7
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 3.6e-15 86.7 197 28.9
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 1.9e-11 74.3 57 61.4
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 6.7e-09 65.9 67 50.7
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.5e-08 63.9 102 34.3
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 5.6e-08 62.8 34 76.5
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 5.6e-08 62.8 61 52.5
AT2G10550 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 9.0e-06 55.5 96 38.5


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