Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 1.1e-59 233.0 112 100.0
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 2.2e-23 112.5 86 74.4
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 4.1e-22 108.2 86 70.9
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.6e-21 106.3 93 67.7
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 7.7e-21 104.0 86 67.4
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.3e-20 103.2 86 67.4
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 2.2e-20 102.4 92 64.1
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 5.0e-20 101.3 86 65.1
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 5.0e-20 101.3 86 65.1
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 8.5e-20 100.5 85 64.7
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 8.5e-20 100.5 85 64.7
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 1.1e-19 100.1 85 62.4
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 1.5e-19 99.8 85 65.9
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 1.9e-19 99.4 85 65.9
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 3.2e-19 98.6 85 62.4
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 4.2e-19 98.2 85 64.7
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 7.2e-19 97.4 84 65.5
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 9.4e-19 97.1 86 60.5
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 1.2e-18 96.7 85 63.5
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 1.6e-18 96.3 85 63.5
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 1.6e-18 96.3 85 63.5
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 2.1e-18 95.9 86 59.3
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 3.6e-18 95.1 85 63.5
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 4.7e-18 94.7 86 59.3
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 4.7e-18 94.7 86 59.3
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 6.1e-18 94.4 85 62.4
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 6.1e-18 94.4 85 62.4
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 6.1e-18 94.4 86 60.5
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 6.1e-18 94.4 85 63.5
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 6.1e-18 94.4 85 60.0
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 1.0e-17 93.6 85 62.4
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 1.4e-17 93.2 85 61.2
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 1.4e-17 93.2 85 61.2
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 1.8e-17 92.8 85 60.0
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 1.8e-17 92.8 85 60.0
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 2.3e-17 92.4 74 63.5
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 2.3e-17 92.4 85 60.0
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 3.0e-17 92.0 85 60.0
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 3.0e-17 92.0 86 58.1
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 3.0e-17 92.0 86 58.1
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 4.0e-17 91.7 85 61.2
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 4.0e-17 91.7 74 66.2
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 5.2e-17 91.3 74 66.2
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 5.2e-17 91.3 74 63.5
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 5.2e-17 91.3 74 63.5
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 5.2e-17 91.3 84 58.3
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 5.2e-17 91.3 85 60.0
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 5.2e-17 91.3 86 60.5
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 6.7e-17 90.9 85 58.8
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 6.7e-17 90.9 85 57.6
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 8.8e-17 90.5 86 57.0
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 8.8e-17 90.5 86 57.0
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 8.8e-17 90.5 85 58.8
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.8e-17 90.5 91 54.9
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 8.8e-17 90.5 86 58.1
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 8.8e-17 90.5 85 58.8
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 1.2e-16 90.1 86 55.8
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 1.2e-16 90.1 86 57.0
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 1.2e-16 90.1 74 64.9
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 1.5e-16 89.7 86 57.0
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 1.5e-16 89.7 85 57.6
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 2.0e-16 89.4 86 55.8
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 2.0e-16 89.4 86 55.8
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 2.0e-16 89.4 91 53.8
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.0e-16 89.4 91 53.8
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 2.0e-16 89.4 84 58.3
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 2.0e-16 89.4 86 60.5
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.6e-16 89.0 91 53.8
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 3.3e-16 88.6 86 55.8
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 3.3e-16 88.6 86 55.8
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 3.3e-16 88.6 86 55.8
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 3.3e-16 88.6 86 55.8
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 3.3e-16 88.6 85 57.6
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 3.3e-16 88.6 81 58.0
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 4.4e-16 88.2 86 54.7
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 4.4e-16 88.2 85 57.6
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 4.4e-16 88.2 73 64.4
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 5.7e-16 87.8 93 55.9
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 5.7e-16 87.8 86 54.7
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 5.7e-16 87.8 86 55.8
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 9.7e-16 87.0 86 54.7
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 9.7e-16 87.0 85 57.6
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.3e-15 86.7 91 52.7
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 1.3e-15 86.7 75 64.0
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 1.3e-15 86.7 75 64.0
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 1.7e-15 86.3 75 64.0
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 1.7e-15 86.3 75 64.0
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 2.2e-15 85.9 86 53.5
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 2.8e-15 85.5 74 62.2
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 2.8e-15 85.5 75 62.7
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 2.8e-15 85.5 86 57.0
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 2.8e-15 85.5 86 57.0
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 2.8e-15 85.5 86 55.8
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 3.7e-15 85.1 85 57.6
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 4.8e-15 84.7 85 60.0
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 4.8e-15 84.7 75 61.3
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 4.8e-15 84.7 91 52.7
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 6.3e-15 84.3 85 57.6
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 8.2e-15 84.0 75 61.3
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.1e-14 83.6 74 62.2
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.1e-14 83.6 74 62.2
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.1e-14 83.6 84 54.8
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 1.1e-14 83.6 73 57.5
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 2.4e-14 82.4 74 60.8
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 2.4e-14 82.4 75 62.7
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 3.1e-14 82.0 84 57.1
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 5.3e-14 81.3 75 57.3
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 3.5e-13 78.6 85 50.6
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.3e-12 76.6 75 60.0
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 1.3e-12 76.6 73 57.5
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 2.9e-12 75.5 75 56.0
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 1.1e-11 73.6 91 51.6
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 1.5e-11 73.2 71 56.3
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 4.2e-11 71.6 74 51.4
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 4.2e-11 71.6 95 41.1
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 1.2e-10 70.1 74 48.6
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 2.1e-10 69.3 72 47.2
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 4.7e-10 68.2 74 48.6
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 1.0e-09 67.0 74 45.9
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 1.5e-08 63.2 59 55.9
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 2.0e-08 62.8 51 60.8
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 4.4e-08 61.6 74 45.9


User provided reference genes

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