Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 8.9e-163 577.0 321 100.0
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.9e-133 479.6 330 84.5
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.8e-126 456.4 322 81.7
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 3.2e-120 435.6 322 78.6
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 4.2e-120 435.3 322 80.1
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 2.1e-119 433.0 323 78.6
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 3.5e-119 432.2 324 78.4
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 4.6e-119 431.8 323 79.6
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 1.0e-118 430.6 324 78.4
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 1.3e-118 430.3 323 78.3
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 5.1e-118 428.3 322 78.6
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 6.7e-118 427.9 322 77.6
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 5.6e-117 424.9 329 76.3
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 7.4e-117 424.5 322 78.0
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 7.4e-117 424.5 322 77.3
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 9.6e-117 424.1 322 76.7
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.3e-116 423.7 322 77.3
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 1.6e-116 423.3 320 78.8
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 3.7e-116 422.2 327 74.9
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 4.8e-116 421.8 323 76.8
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 6.2e-116 421.4 322 77.0
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.1e-115 420.6 326 77.3
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 2.4e-115 419.5 322 75.8
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 2.4e-115 419.5 322 78.0
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 3.1e-115 419.1 325 76.0
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 6.9e-115 417.9 322 76.7
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 9.0e-115 417.5 322 76.1
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 9.0e-115 417.5 322 77.0
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 1.5e-114 416.8 322 75.5
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.6e-114 416.0 322 76.4
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 2.6e-114 416.0 282 83.3
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 3.4e-114 415.6 323 76.8
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.4e-114 415.6 285 83.5
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 3.4e-114 415.6 324 75.9
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 3.4e-114 415.6 335 74.9
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.5e-114 415.2 327 76.1
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 5.8e-114 414.8 319 77.1
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 2.9e-113 412.5 323 76.2
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.9e-113 412.5 327 74.6
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 2.9e-113 412.5 323 75.5
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 3.8e-113 412.1 330 76.4
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 3.8e-113 412.1 323 75.9
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 4.9e-113 411.8 321 76.6
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 6.5e-113 411.4 322 77.0
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 6.5e-113 411.4 323 76.2
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 8.4e-113 411.0 323 75.2
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 8.4e-113 411.0 323 77.4
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.1e-112 410.6 322 74.8
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 2.5e-112 409.5 322 76.4
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 2.5e-112 409.5 321 74.1
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 3.2e-112 409.1 322 76.1
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 4.2e-112 408.7 324 73.5
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 4.2e-112 408.7 324 74.4
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 9.3e-112 407.5 322 76.1
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 1.2e-111 407.1 321 74.5
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 1.6e-111 406.8 322 73.6
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 1.6e-111 406.8 329 74.2
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 1.6e-111 406.8 325 75.7
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 1.6e-111 406.8 323 74.6
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 4.6e-111 405.2 323 74.6
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 6.0e-111 404.8 325 76.3
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 7.9e-111 404.4 328 74.1
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.0e-110 404.1 322 75.5
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 1.0e-110 404.1 330 74.5
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.3e-110 403.7 322 73.6
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 1.8e-110 403.3 326 75.2
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 1.8e-110 403.3 323 75.2
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.8e-110 403.3 322 73.9
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 3.0e-110 402.5 322 75.8
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 5.1e-110 401.7 332 74.4
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 5.1e-110 401.7 316 75.3
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 5.1e-110 401.7 316 75.3
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 8.7e-110 401.0 323 73.7
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 8.7e-110 401.0 322 73.0
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 1.1e-109 400.6 324 75.0
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.1e-109 400.6 323 73.1
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 1.1e-109 400.6 292 80.1
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 1.9e-109 399.8 325 74.5
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 1.9e-109 399.8 375 68.0
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 2.5e-109 399.4 323 73.4
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 3.3e-109 399.1 319 73.4
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 3.3e-109 399.1 316 74.7
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 4.3e-109 398.7 325 74.8
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 5.7e-109 398.3 319 73.7
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 5.7e-109 398.3 320 74.1
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 9.7e-109 397.5 319 73.7
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 1.3e-108 397.1 318 74.8
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 2.2e-108 396.4 333 71.8
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 2.2e-108 396.4 319 72.7
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 4.8e-108 395.2 316 74.7
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 4.8e-108 395.2 316 74.7
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 4.8e-108 395.2 316 74.1
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 6.3e-108 394.8 322 73.0
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 6.3e-108 394.8 281 81.9
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 8.2e-108 394.4 325 72.9
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 1.1e-107 394.0 318 74.8
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 1.4e-107 393.7 321 73.2
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 1.4e-107 393.7 352 69.3
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 1.8e-107 393.3 325 72.6
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 1.8e-107 393.3 324 72.8
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 1.8e-107 393.3 325 72.6
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.8e-107 393.3 321 73.2
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 3.1e-107 392.5 318 74.2
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 4.1e-107 392.1 324 72.5
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 4.1e-107 392.1 324 72.5
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 4.1e-107 392.1 334 71.9
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 5.3e-107 391.7 254 88.6
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.3e-107 391.7 328 72.3
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 5.3e-107 391.7 322 73.3
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 9.0e-107 391.0 324 72.8
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.2e-106 390.6 318 74.5
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 7.7e-106 387.9 323 73.4
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 1.0e-105 387.5 320 74.4
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 1.0e-105 387.5 321 73.8
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 1.0e-105 387.5 319 73.0
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 1.3e-105 387.1 274 82.1
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.9e-105 386.0 317 67.5
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 2.9e-105 386.0 324 72.2
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 2.9e-105 386.0 280 80.0
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 3.8e-105 385.6 322 73.6
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 6.5e-105 384.8 268 81.7
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 6.5e-105 384.8 256 87.1
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 6.5e-105 384.8 263 82.9
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 1.1e-104 384.0 326 70.2
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.4e-104 383.6 318 73.6
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.4e-104 383.6 326 72.7
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.9e-104 383.3 326 72.7
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 3.2e-104 382.5 255 77.6
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 4.2e-104 382.1 302 77.8
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 7.2e-104 381.3 320 73.1
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 7.9e-103 377.9 302 75.5
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 3.9e-102 375.6 321 72.0
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.1e-102 375.2 259 84.2
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 5.1e-102 375.2 323 72.8
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 2.2e-100 369.8 324 71.0
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 1.4e-99 367.1 268 77.6
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 9.1e-99 364.4 300 73.0
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 1.3e-97 360.5 308 70.8
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 2.2e-97 359.8 250 85.2
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 1.1e-96 357.5 276 74.6
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 5.1e-94 348.6 261 77.4
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.8e-92 342.8 323 60.7
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 8.2e-92 341.3 283 67.8
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.4e-91 339.7 226 87.6
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 3.1e-91 339.3 304 70.7
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 3.5e-90 335.9 226 85.4
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 4.2e-88 328.9 284 68.0
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 2.7e-87 326.2 330 66.4
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 2.2e-84 316.6 356 61.0
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 4.1e-83 312.4 259 69.1
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 2.6e-82 309.7 252 64.3
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.0e-81 305.4 278 68.3
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.0e-81 305.4 278 68.3
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 8.0e-79 298.1 250 60.4
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 3.4e-77 292.7 246 75.2
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.7e-76 289.3 300 57.7
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 1.1e-75 287.7 255 73.3
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 5.3e-75 285.4 196 84.7
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 2.0e-74 283.5 246 75.6
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 3.7e-68 262.7 235 73.2
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 2.7e-58 229.9 267 46.8
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 5.6e-56 222.2 261 52.1
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 4.7e-55 219.2 120 88.3
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 4.0e-54 216.1 144 75.7
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 1.6e-47 194.1 144 71.5
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 6.2e-47 192.2 120 78.3
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.1e-46 191.4 193 68.9
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.6e-42 177.6 106 85.8
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.1e-42 177.2 212 62.3
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 1.4e-38 164.5 121 72.7
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 1.3e-33 147.9 92 78.3
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.0e-33 146.7 256 39.5
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 3.0e-33 146.7 96 75.0
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 4.4e-29 132.9 108 74.1
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 2.1e-26 124.0 91 71.4
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 9.9e-21 105.1 168 50.0
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 5.1e-17 92.8 107 65.4
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.9e-16 90.9 169 47.9
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 3.3e-16 90.1 83 80.7
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 3.1e-14 83.6 122 45.9
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 2.1e-10 70.9 88 45.5
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 6.2e-07 59.3 83 33.7


User provided reference genes

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