Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0021252g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 0.0e+00 1266.5 654 100.0
Nitab4.5_0010437g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 0.0e+00 1122.8 747 81.9
Peaxi162Scf00744g00354 Petunia axillaris HOM05D005064 ORTHO05D006611 4.3e-273 944.5 785 66.8
Sopen02g008440 Solanum pennellii HOM05D005064 ORTHO05D006611 8.2e-264 913.7 763 66.3
Solyc02g050200.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 3.7e-240 835.1 674 67.8
CAN.G989.4 Capsicum annuum HOM05D005064 ORTHO05D006611 8.3e-224 780.8 764 59.6
Nitab4.5_0001246g0050 Nicotiana tabacum HOM05D005064 ORTHO05D006611 1.0e-218 763.8 397 97.2
Cc06_g00810 Coffea canephora HOM05D005064 ORTHO05D006611 8.5e-136 488.4 744 42.2
Dinv35394 Davidia involucrata HOM05D005064 ORTHO05D006611 1.6e-134 484.2 703 44.4
Lj2C68T2 Lonicera japonica HOM05D005064 ORTHO05D006611 1.5e-132 477.6 703 43.8
Oeu026978.1 Olea europaea HOM05D005064 ORTHO05D006611 6.1e-126 455.7 680 43.4
Manes.09G111200 Manihot esculenta HOM05D005064 ORTHO05D006611 4.5e-121 439.5 743 40.5
Migut.J00101 Erythranthe guttata HOM05D005064 ORTHO05D006611 1.1e-119 434.9 766 40.1
Atru.chr8.2328 Acer truncatum HOM05D005064 ORTHO05D006611 1.6e-118 431.0 781 40.1
CSS0042379 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 2.7e-118 430.3 758 39.6
GSVIVG01030280001 Vitis vinifera HOM05D005064 ORTHO05D006611 1.5e-116 424.5 731 41.3
Rhsim05G0225400 Rhododendron simsii HOM05D005064 ORTHO05D006611 2.7e-113 413.7 712 39.7
MSTRG.18977 Avicennia marina HOM05D005064 ORTHO05D006611 5.9e-113 412.5 774 39.5
SGA_v2.0_scaffold85G26687 Striga asiatica HOM05D005064 ORTHO05D006611 4.2e-111 406.4 734 40.5
Duzib093G0745 Durio zibethinus HOM05D005064 ORTHO05D006611 1.5e-108 397.9 735 37.7
vmacro04273 Vaccinium macrocarpon HOM05D005064 ORTHO05D006611 8.6e-104 382.1 716 37.7
Gohir.A04G095400 Gossypium hirsutum HOM05D005064 ORTHO05D006611 1.1e-103 381.7 729 37.9
Gorai.012G119100 Gossypium raimondii HOM05D005064 ORTHO05D006611 1.1e-103 381.7 729 38.3
Gohir.D04G135300 Gossypium hirsutum HOM05D005064 ORTHO05D006611 1.9e-103 380.9 729 38.3
TWI74G0298 Tripterygium wilfordii HOM05D005064 ORTHO05D006611 3.3e-103 380.2 734 38.0
Hund25531 Selenicereus undatus HOM05D005064 ORTHO05D006611 9.5e-103 378.6 783 36.3
Potri.014G189600 Populus trichocarpa HOM05D005064 ORTHO05D006611 2.8e-102 377.1 634 40.1
QL07p034075 Quercus lobata HOM05D005064 ORTHO05D006611 2.8e-102 377.1 717 38.9
Nn2g11003 Nelumbo nucifera HOM05D005064 ORTHO05D006611 3.6e-102 376.7 779 37.7
Sabra14G0144800 Salix brachista HOM05D005064 ORTHO05D006611 8.0e-102 375.6 746 37.5
Ciclev10013403m.g Citrus clementina HOM05D005064 ORTHO05D006611 1.8e-101 374.4 704 38.6
Thecc.05G007600 Theobroma cacao HOM05D005064 ORTHO05D006611 5.7e-100 369.4 740 37.3
CANSAT35G0044 Cannabis sativa HOM05D005064 ORTHO05D006611 2.2e-99 367.5 705 37.4
SalBow5G0042 Salvia bowleyana HOM05D005064 ORTHO05D006611 2.8e-99 367.1 749 37.9
SalBow5G1296 Salvia bowleyana HOM05D005064 ORTHO05D006611 2.8e-99 367.1 749 37.9
Cpa.g.sc5.230 Carica papaya HOM05D005064 ORTHO05D006611 8.3e-99 365.5 736 37.5
Haze_21075 Corylus avellana HOM05D005064 ORTHO05D006611 2.0e-97 360.9 756 36.5
ClCG10G022430 Citrullus lanatus HOM05D005064 ORTHO05D006611 2.7e-97 360.5 625 40.2
Prupe.4G287200 Prunus persica HOM05D005064 ORTHO05D006611 3.5e-97 360.1 631 38.8
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 2.9e-96 357.1 782 34.7
Sed0013669 Sechium edule HOM05D005064 ORTHO05D006611 1.5e-95 354.8 717 38.1
CsaV3_3G033440 Cucumis sativus L. HOM05D005064 ORTHO05D006611 2.5e-95 354.0 704 36.9
Ah.12g059020 Amaranthus hybridus HOM05D005064 ORTHO05D006611 5.6e-95 352.8 749 37.1
Sc07g0001460 Simmondsia chinensis HOM05D005064 ORTHO05D006611 8.0e-94 349.0 742 35.6
Aa31LG1G23250 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.4e-93 348.2 748 35.3
AT5G01630 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 2.3e-93 347.4 737 35.5
RcHm_v2.0_Chr3g0484931 Rosa chinensis HOM05D005064 ORTHO05D006611 1.5e-92 344.7 626 38.3
TAR633G1737 Trochodendron aralioides HOM05D005064 ORTHO05D006611 2.0e-92 344.4 721 36.3
AL6G10420 Arabidopsis lyrata HOM05D005064 ORTHO05D006611 4.4e-92 343.2 737 34.5
CARHR211980 Cardamine hirsuta HOM05D005064 ORTHO05D006611 5.8e-92 342.8 726 34.7
MELO3C009135.2 Cucumis melo HOM05D005064 ORTHO05D006611 2.2e-91 340.9 725 36.6
Carub.0006s0020 Capsella rubella HOM05D005064 ORTHO05D006611 2.9e-91 340.5 741 35.0
ECA234G3016 Erigeron canadensis HOM05D005064 ORTHO05D006611 3.7e-91 340.1 745 34.6
THA.LOC104816179 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 1.1e-90 338.6 766 34.5
EL10Ac5g12491 Beta vulgaris HOM05D005064 ORTHO05D006611 1.4e-90 338.2 635 37.5
THA.LOC104798645 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 1.4e-90 338.2 737 34.9
A03p00180 Brassica napus HOM05D005064 ORTHO05D006611 5.4e-90 336.3 717 35.4
Eucgr.K02953 Eucalyptus grandis HOM05D005064 ORTHO05D006611 5.4e-90 336.3 626 36.9
AUR62030526 Chenopodium quinoa HOM05D005064 ORTHO05D006611 7.0e-90 335.9 716 36.0
AUR62030766 Chenopodium quinoa HOM05D005064 ORTHO05D006611 7.8e-89 332.4 742 36.4
Lalb_Chr22g0360891 Lupinus albus HOM05D005064 ORTHO05D006611 3.9e-88 330.1 757 34.6
MD01G1008700 Malus domestica HOM05D005064 ORTHO05D006611 1.6e-86 324.7 824 33.3
Thhalv10027627m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 2.1e-86 324.3 771 32.7
Thhalv10012491m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 3.6e-86 323.6 751 34.2
COL.COLO4_14461 Corchorus olitorius HOM05D005064 ORTHO05D006611 4.7e-86 323.2 642 36.1
HanXRQChr15g0486851 Helianthus annuus HOM05D005064 ORTHO05D006611 8.0e-86 322.4 768 34.6
Glyma.13G010700 Glycine max HOM05D005064 ORTHO05D006611 1.8e-85 321.2 721 34.5
BcaB01g06242 Brassica carinata HOM05D005064 ORTHO05D006611 2.3e-85 320.9 734 32.8
BcaB01g06109 Brassica carinata HOM05D005064 ORTHO05D006611 8.9e-85 318.9 597 36.5
C03p00330 Brassica napus HOM05D005064 ORTHO05D006611 2.0e-84 317.8 597 36.3
Lj6g0012785 Lotus japonicus HOM05D005064 ORTHO05D006611 2.6e-84 317.4 731 33.8
Lsat_1_v5_gn_5_149520 Lactuca sativa HOM05D005064 ORTHO05D006611 4.4e-84 316.6 645 36.0
Sp7g05130 Schrenkiella parvula HOM05D005064 ORTHO05D006611 3.7e-83 313.5 737 33.1
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea HOM05D005064 ORTHO05D006611 4.9e-83 313.2 730 34.7
Aqoxy2G00779 Aquilegia oxysepala HOM05D005064 ORTHO05D006611 2.4e-82 310.8 652 35.0
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea HOM05D005064 ORTHO05D006611 9.2e-82 308.9 736 34.0
AT4G00020 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 1.2e-81 308.5 620 36.5
C06p17140 Brassica napus HOM05D005064 ORTHO05D006611 2.3e-80 304.3 749 32.4
BolC6t36909H Brassica oleracea HOM05D005064 ORTHO05D006611 2.3e-80 304.3 749 32.4
FAN19G0240 Fragaria x ananassa HOM05D005064 ORTHO05D006611 2.3e-80 304.3 604 36.9
FvH4_1g25820 Fragaria vesca HOM05D005064 ORTHO05D006611 3.0e-80 303.9 604 36.6
FAN23G3111 Fragaria x ananassa HOM05D005064 ORTHO05D006611 3.0e-80 303.9 605 36.5
Medtr3g083250 Medicago truncatula HOM05D005064 ORTHO05D006611 5.1e-80 303.1 749 35.5
Ca_16367_v3 Cicer arietinum L. HOM05D005064 ORTHO05D006611 8.6e-80 302.4 763 32.9
VMungo0540G1710 Vigna mungo HOM05D005064 ORTHO05D006611 8.6e-80 302.4 729 33.3
A05p16640 Brassica napus HOM05D005064 ORTHO05D006611 1.5e-79 301.6 750 32.4
BraA03t09408Z Brassica rapa HOM05D005064 ORTHO05D006611 1.9e-79 301.2 797 31.4
PSO339G1571 Papaver somniferum HOM05D005064 ORTHO05D006611 2.5e-79 300.8 764 33.5
BolC3t12595H Brassica oleracea HOM05D005064 ORTHO05D006611 5.6e-79 299.7 636 34.3
BcaB04g17743 Brassica carinata HOM05D005064 ORTHO05D006611 9.5e-79 298.9 678 33.9
BraA05t20569Z Brassica rapa HOM05D005064 ORTHO05D006611 6.2e-78 296.2 749 31.8
BcaC08g44292 Brassica carinata HOM05D005064 ORTHO05D006611 1.1e-77 295.4 779 31.1
SHI12869 Sapria himalayana HOM05D005064 ORTHO05D006611 3.2e-74 283.9 705 33.8
Psat5g101280 Pisum sativum HOM05D005064 ORTHO05D006611 5.4e-74 283.1 628 34.7
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 1.2e-73 282.0 754 32.2
TPR.G19329 Trifolium pratense HOM05D005064 ORTHO05D006611 3.0e-72 277.3 658 34.7
ATR0594G137 Amborella trichopoda HOM05D005064 ORTHO05D006611 3.9e-72 276.9 784 32.1
PSO801G0135 Papaver somniferum HOM05D005064 ORTHO05D006611 9.5e-71 272.3 768 32.0
FAN28G2142 Fragaria x ananassa HOM05D005064 ORTHO05D006611 4.4e-68 263.5 605 34.5
Phvul.006G005800 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 5.8e-68 263.1 669 32.1
Medtr0191s0030 Medicago truncatula HOM05D005064 ORTHO05D006611 6.4e-67 259.6 730 31.4
CDE04G0109 Ceratophyllum demersum HOM05D005064 ORTHO05D006611 2.8e-62 244.2 609 34.0
HPP92_013842 Vanilla planifolia HOM05D005064 ORTHO05D006611 3.1e-61 240.7 621 32.9
CAN.G989.5 Capsicum annuum HOM05D005064 ORTHO05D000001 2.6e-60 237.7 222 57.2
Os01g0164800 Oryza sativa ssp. japonica HOM05D005064 ORTHO05D006611 5.8e-60 236.5 754 30.6
Zm00001eb419130 Zea mays HOM05D005064 ORTHO05D006611 2.1e-57 228.0 774 29.8
CiPaw.09G214500 Carya illinoinensis HOM05D005064 ORTHO05D006611 3.5e-57 227.3 371 40.4
Sp6g40890 Schrenkiella parvula HOM05D005064 ORTHO05D006611 7.3e-55 219.5 415 35.7
Medtr6g033115 Medicago truncatula HOM05D005064 ORTHO05D006611 2.1e-49 201.4 380 36.1
SEGI_30642 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 6.7e-48 196.4 670 29.3
Haze_21131 Corylus avellana HOM05D005064 ORTHO05D006611 2.4e-45 188.0 632 30.1
Haze_21134 Corylus avellana HOM05D005064 ORTHO05D006611 1.2e-44 185.7 632 29.9
HPP92_013858 Vanilla planifolia HOM05D005064 ORTHO05D006611 2.0e-44 184.9 363 37.5
MBI03_g13049_MAGBIO Magnolia biondii HOM05D005064 ORTHO05D006611 6.7e-40 169.9 360 35.6
SEGI_27109 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 3.3e-39 167.5 598 29.1
unitig_21.g20911 Utricularia gibba HOM05D005064 ORTHO05D006611 4.3e-39 167.2 525 32.0
CSS0001431 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 4.8e-38 163.7 213 45.1
Nitab4.5_0006212g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 1.5e-36 158.7 129 76.0
CiPaw.09G214600 Carya illinoinensis HOM05D005064 ORTHO05D006611 6.7e-32 143.3 378 33.9
CSS0019886 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 9.0e-29 132.9 323 34.4
AagrBONN_evm.TU.Sc2ySwM_362.1800 Anthoceros agrestis HOM05D005064 ORTHO05D006611 4.3e-23 114.0 470 24.7
Mapoly0045s0096 Marchantia polymorpha HOM05D005064 ORTHO05D006611 7.4e-23 113.2 450 27.8
Solyc02g050210.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 1.7e-19 102.1 66 78.8
FAN26G2490 Fragaria x ananassa HOM05D005064 ORTHO05D006611 3.0e-16 91.3 115 47.0
CBR_g19766 Chara braunii HOM05D005064 ORTHO05D000048 4.8e-14 84.0 403 24.6
Sabra16G0120100 Salix brachista HOM05D005064 ORTHO05D050424 9.4e-10 69.7 44 70.5
Oeu027330.4 Olea europaea HOM05D005064 ORTHO05D006611 1.1e-07 62.8 56 57.1
MCO02G178 Micromonas commoda HOM05D005064 ORTHO05D006611 1.5e-07 62.4 126 34.9
Lalb_Chr08g0236481 Lupinus albus HOM05D005064 ORTHO05D006611 9.7e-07 59.7 45 66.7
Sabra06G0080700 Salix brachista HOM05D005064 ORTHO05D006611 2.2e-06 58.5 40 70.0


User provided reference genes

Program Settings