Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 0.0e+00 1996.5 1084 100.0
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 3.1e-308 1062.0 1134 57.3
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.2e-307 1060.1 759 76.4
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.0e-299 1032.7 1116 57.8
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 3.7e-293 1011.9 1127 55.5
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 8.1e-293 1010.7 1134 53.8
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 3.1e-276 955.7 846 62.2
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 1.7e-269 933.3 910 58.6
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 8.0e-248 861.3 1112 51.3
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 1.7e-245 853.6 1126 49.6
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 3.1e-244 849.4 1116 49.0
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 3.1e-244 849.4 1095 48.4
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 1.6e-243 847.0 1096 47.9
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.6e-224 783.9 1116 47.5
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 6.1e-224 781.9 1097 47.9
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 2.2e-221 773.5 1104 46.5
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 1.4e-220 770.8 1108 48.3
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 2.4e-220 770.0 1136 46.5
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 2.7e-219 766.5 1109 48.0
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 4.6e-219 765.8 1122 46.7
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 5.8e-214 748.8 1128 46.6
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 9.8e-214 748.0 1139 44.9
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 4.9e-213 745.7 1154 43.7
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 1.9e-212 743.8 1116 45.9
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 3.0e-210 736.5 1140 44.6
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 1.1e-207 728.0 1174 42.9
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 3.1e-207 726.5 1158 44.5
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 3.7e-205 719.5 1155 44.9
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 4.9e-205 719.2 1142 45.2
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 8.3e-205 718.4 1137 43.2
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 1.9e-204 717.2 1122 45.3
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 5.4e-204 715.7 1139 45.0
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 7.1e-204 715.3 1147 48.5
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 1.2e-203 714.5 995 49.0
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.6e-203 714.1 1101 46.5
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 3.5e-203 713.0 1109 43.4
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 5.1e-202 709.1 1128 45.0
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 1.1e-201 708.0 1111 42.8
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 1.1e-201 708.0 1195 43.5
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 2.5e-201 706.8 1092 44.1
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 2.4e-199 700.3 1111 42.8
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 8.9e-199 698.4 1147 44.4
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 3.5e-195 686.4 1118 45.0
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 1.7e-194 684.1 1104 46.1
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 9.6e-193 678.3 1122 44.9
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 9.6e-193 678.3 1104 46.1
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 2.1e-192 677.2 1152 44.0
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.4e-191 674.5 1128 45.4
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 5.3e-191 672.5 1125 41.3
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.2e-190 671.4 1164 44.3
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 2.0e-190 670.6 1131 42.5
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 7.6e-190 668.7 1019 43.3
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 1.7e-189 667.5 1120 41.6
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 1.4e-188 664.5 1126 41.0
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 2.4e-188 663.7 1142 42.3
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 4.6e-187 659.4 769 50.2
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 7.8e-187 658.7 1138 43.1
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 3.3e-185 653.3 1139 40.5
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 5.6e-185 652.5 1114 41.3
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 7.3e-185 652.1 1080 44.1
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 1.6e-184 651.0 1114 41.3
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.1e-183 648.3 1160 43.6
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 1.2e-182 644.8 1139 40.3
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 2.6e-182 643.7 1046 44.1
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 4.5e-182 642.9 1138 42.4
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 1.3e-181 641.3 1128 42.6
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 3.2e-180 636.7 1116 41.8
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 5.4e-180 636.0 938 44.9
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 2.1e-179 634.0 1118 42.5
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 4.6e-179 632.9 1238 39.0
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 6.2e-176 622.5 1133 42.1
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 9.0e-175 618.6 1118 41.9
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 2.5e-172 610.5 1092 40.8
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 3.2e-172 610.1 1152 42.7
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 3.3e-169 600.1 1095 40.5
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 8.2e-168 595.5 1111 40.4
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 2.0e-166 590.9 1151 39.0
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 6.5e-165 585.9 1121 41.0
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 8.4e-165 585.5 1108 39.8
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 1.0e-162 578.6 825 50.2
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 1.0e-162 578.6 1126 38.8
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 1.3e-162 578.2 1106 39.8
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 2.3e-162 577.4 1127 38.8
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 3.9e-162 576.6 1127 39.5
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 1.1e-161 575.1 1131 41.0
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 9.7e-161 572.0 1113 40.9
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 3.4e-158 563.5 1100 40.0
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 5.9e-158 562.8 1112 40.6
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 2.2e-157 560.8 1137 38.8
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 1.2e-155 555.1 1137 38.9
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 4.6e-155 553.1 1132 39.0
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 2.0e-153 547.7 1078 41.0
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 2.5e-153 547.4 1107 37.6
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 5.7e-153 546.2 1132 39.0
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 7.4e-153 545.8 844 41.8
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 1.3e-152 545.0 1202 36.5
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 2.2e-152 544.3 1129 37.8
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 6.3e-152 542.7 977 39.2
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 8.2e-152 542.3 1067 37.9
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 2.4e-151 540.8 1107 39.0
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 2.6e-150 537.3 902 41.8
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 5.9e-150 536.2 753 46.6
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 5.9e-150 536.2 1073 38.1
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 3.8e-149 533.5 881 43.9
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 2.5e-148 530.8 1129 38.7
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 3.2e-148 530.4 1124 38.8
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 7.2e-148 529.3 1093 39.9
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 1.6e-147 528.1 1093 39.9
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 1.6e-147 528.1 1093 39.9
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 5.1e-146 523.1 1006 39.9
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 1.0e-133 482.3 844 38.7
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 3.2e-132 477.2 784 39.7
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 2.3e-130 471.1 1084 37.8
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 8.8e-130 469.2 810 39.9
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 2.4e-127 461.1 817 39.9
Nitab4.5_0006425g0080 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.5e-116 425.2 356 77.8
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 4.4e-113 413.7 1094 34.6
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 1.2e-107 395.6 1117 31.8
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 1.1e-103 382.5 1081 31.1
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 2.0e-97 361.7 476 46.0
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 1.1e-95 355.9 917 33.9
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 1.9e-95 355.1 861 33.3
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 1.2e-94 352.4 962 31.1
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 8.1e-83 313.2 1077 28.5
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 2.9e-80 304.7 1081 29.6
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 9.6e-76 289.7 1126 29.5
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 2.6e-73 281.6 859 30.4
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 9.9e-73 279.6 402 42.5
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 9.3e-63 246.5 851 28.4
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 3.5e-62 244.6 673 39.2
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 1.1e-58 233.0 192 62.5
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 2.9e-56 224.9 325 42.8
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.9e-52 212.2 1011 27.7
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 2.5e-52 211.8 872 27.3
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 1.6e-51 209.1 682 30.2
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 4.8e-51 207.6 513 33.5
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 8.2e-51 206.8 1077 27.6
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 4.5e-49 201.1 382 38.7
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 2.5e-47 195.3 803 27.3
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 2.5e-47 195.3 838 27.8
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 5.5e-47 194.1 733 26.7
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 9.3e-47 193.4 831 25.9
SHI29649 Sapria himalayana HOM05D001849 ORTHO05D004075 2.2e-43 182.2 379 38.3
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 2.8e-43 181.8 781 25.9
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 1.6e-38 166.0 176 51.1
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 1.8e-37 162.5 149 57.0
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 2.5e-36 158.7 682 26.4
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 5.7e-36 157.5 843 26.5
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 1.8e-34 152.5 193 48.2
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 6.9e-34 150.6 218 42.2
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 6.9e-34 150.6 191 44.0
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 1.2e-33 149.8 168 51.2
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 2.9e-32 145.2 637 24.6
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 5.0e-32 144.4 191 43.5
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 8.5e-32 143.7 183 47.5
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 4.2e-31 141.4 271 38.0
BcaC03g15372 Brassica carinata HOM05D001849 ORTHO05D004075 2.1e-30 139.0 807 24.4
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 9.1e-26 123.6 884 22.3
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 4.5e-25 121.3 877 22.0
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 1.0e-24 120.2 748 25.0
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 4.2e-23 114.8 171 34.5
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 1.6e-22 112.8 93 55.9
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 6.1e-22 110.9 169 37.3
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 1.4e-21 109.8 164 41.5
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 1.4e-18 99.8 179 29.1
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 5.0e-16 91.3 95 47.4
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 1.1e-15 90.1 91 50.5
Nitab4.5_0004322g0030 Nicotiana tabacum HOM05D001849 ORTHO05D004075 3.4e-12 78.6 58 67.2
Atru.chr11.323 Acer truncatum HOM05D001849 ORTHO05D004075 7.5e-12 77.4 359 27.0
BcaB03g14986 Brassica carinata HOM05D001849 ORTHO05D004075 7.0e-10 70.9 81 51.9
Oeu013447.1 Olea europaea HOM05D001849 ORTHO05D004075 3.5e-09 68.6 201 32.8
Cpa.g.sc25.149 Carica papaya HOM05D020865 ORTHO05D004075 8.5e-08 63.9 56 60.7
Manes.06G063600 Manihot esculenta HOM05D001849 ORTHO05D004075 1.9e-07 62.8 47 59.6
Medtr3g035000 Medicago truncatula HOM05D000079 ORTHO05D004075 9.4e-07 60.5 52 48.1
SHI29651 Sapria himalayana HOM05D001849 ORTHO05D004075 8.0e-06 57.4 358 36.3


User provided reference genes

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