Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011154g0010 Nicotiana tabacum HOM05D000228 ORTHO05D005112 4.2e-173 611.3 314 100.0
Nitab4.5_0001347g0020 Nicotiana tabacum HOM05D000228 ORTHO05D005112 5.9e-143 511.1 414 70.3
Sopen10g030910 Solanum pennellii HOM05D000228 ORTHO05D005112 3.4e-114 415.6 407 59.2
Solyc10g080350.3 Solanum lycopersicum HOM05D000228 ORTHO05D005112 7.5e-114 414.5 405 59.3
Peaxi162Scf03258g00019 Petunia axillaris HOM05D000228 ORTHO05D005112 1.8e-112 409.8 409 57.7
CAN.G128.23 Capsicum annuum HOM05D000228 ORTHO05D005112 7.5e-106 387.9 392 57.9
Cc06_g16580 Coffea canephora HOM05D000228 ORTHO05D005112 1.1e-61 241.1 415 40.0
Rhsim03G0012300 Rhododendron simsii HOM05D000228 ORTHO05D005112 2.8e-60 236.5 393 37.2
Dinv36249 Davidia involucrata HOM05D000228 ORTHO05D005112 1.3e-57 227.6 415 37.6
vmacro20114 Vaccinium macrocarpon HOM05D000228 ORTHO05D005112 1.3e-52 211.1 429 35.0
Oeu004020.1 Olea europaea HOM05D000228 ORTHO05D005112 7.6e-50 201.8 412 37.1
SGA_v2.0_scaffold105G30449 Striga asiatica HOM05D000228 ORTHO05D005112 1.3e-49 201.1 426 36.2
Actinidia09359 Actinidia chinensis HOM05D000228 ORTHO05D005112 1.7e-49 200.7 411 34.8
CSS0039942 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D005112 1.7e-49 200.7 396 37.6
MSTRG.931 Avicennia marina HOM05D000228 ORTHO05D005112 3.8e-49 199.5 425 36.5
GSVIVG01033327001 Vitis vinifera HOM05D000228 ORTHO05D005112 3.2e-48 196.4 400 37.2
Atru.chr1.1030 Acer truncatum HOM05D000228 ORTHO05D005112 3.5e-47 193.0 405 34.3
unitig_32.g11071 Utricularia gibba HOM05D000228 ORTHO05D005112 8.7e-46 188.3 327 40.1
CiPaw.09G034800 Carya illinoinensis HOM05D000228 ORTHO05D005112 1.1e-45 188.0 419 32.9
Manes.09G029200 Manihot esculenta HOM05D000228 ORTHO05D005112 3.7e-44 183.0 400 33.0
Gorai.003G089300 Gossypium raimondii HOM05D000228 ORTHO05D005112 1.8e-43 180.6 411 33.1
Gohir.D03G070500 Gossypium hirsutum HOM05D000228 ORTHO05D005112 3.1e-43 179.9 411 33.1
CANSAT80G1181 Cannabis sativa HOM05D000228 ORTHO05D005112 5.3e-43 179.1 406 34.0
ECA247G1984 Erigeron canadensis HOM05D000228 ORTHO05D005112 1.5e-42 177.6 414 33.6
COL.COLO4_28678 Corchorus olitorius HOM05D000228 ORTHO05D005112 2.0e-42 177.2 409 33.5
Duzib128G0079 Durio zibethinus HOM05D000228 ORTHO05D005112 2.0e-42 177.2 408 33.3
PGR042G3811 Punica granatum HOM05D000228 ORTHO05D005112 2.6e-42 176.8 408 32.6
QL05p021274 Quercus lobata HOM05D000228 ORTHO05D005112 2.6e-42 176.8 414 33.3
Migut.J01785 Erythranthe guttata HOM05D000228 ORTHO05D005112 3.4e-42 176.4 424 33.5
Cfa016860 Carpinus fangiana HOM05D000228 ORTHO05D005112 5.8e-42 175.6 418 35.4
Gohir.A02G106900 Gossypium hirsutum HOM05D000228 ORTHO05D005112 5.8e-42 175.6 411 32.4
Thecc.05G162700 Theobroma cacao HOM05D000228 ORTHO05D005112 1.0e-41 174.9 412 32.3
Sabra06G0039200 Salix brachista HOM05D000228 ORTHO05D005112 2.5e-40 170.2 289 36.3
Lsat_1_v5_gn_9_27541 Lactuca sativa HOM05D000228 ORTHO05D005112 1.6e-39 167.5 414 32.4
SalBow6G4505 Salvia bowleyana HOM05D000228 ORTHO05D005112 1.6e-39 167.5 426 32.9
arahy.Tifrunner.gnm1.ann1.02EG99 Arachis hypogaea HOM05D000228 ORTHO05D005112 1.0e-38 164.9 392 31.4
Potri.006G055300 Populus trichocarpa HOM05D000228 ORTHO05D005112 1.3e-38 164.5 404 31.7
THA.LOC104818848 Tarenaya hassleriana HOM05D000228 ORTHO05D005112 3.0e-38 163.3 395 32.7
arahy.Tifrunner.gnm1.ann1.7V0RSZ Arachis hypogaea HOM05D000228 ORTHO05D005112 6.7e-38 162.2 387 31.0
arahy.Tifrunner.gnm1.ann1.BY74GT Arachis hypogaea HOM05D000228 ORTHO05D005112 6.7e-38 162.2 387 31.5
arahy.Tifrunner.gnm1.ann1.L2VW3R Arachis hypogaea HOM05D000228 ORTHO05D005112 3.3e-37 159.8 387 31.5
Ciclev10004132m.g Citrus clementina HOM05D000228 ORTHO05D005112 9.6e-37 158.3 409 32.5
TWI75G0708 Tripterygium wilfordii HOM05D000228 ORTHO05D005112 1.6e-36 157.5 410 32.2
Carub.0005s2449 Capsella rubella HOM05D000228 ORTHO05D005112 2.1e-36 157.1 392 31.4
Glyma.10G095200 Glycine max HOM05D000228 ORTHO05D005112 4.8e-36 156.0 388 31.7
HanXRQChr10g0290381 Helianthus annuus HOM05D000228 ORTHO05D005112 4.8e-36 156.0 412 30.8
Nn7g37022 Nelumbo nucifera HOM05D000228 ORTHO05D005112 1.4e-35 154.5 431 28.8
MELO3C009661.2 Cucumis melo HOM05D000228 ORTHO05D005112 4.1e-35 152.9 384 32.6
Aa31sc1187G20 Aethionema arabicum HOM05D000228 ORTHO05D005112 6.9e-35 152.1 398 32.4
Aa31sc992G30 Aethionema arabicum HOM05D000228 ORTHO05D005112 6.9e-35 152.1 398 32.4
Phvul.007G255400 Phaseolus vulgaris HOM05D000228 ORTHO05D005112 9.0e-35 151.8 391 31.2
Sed0022055 Sechium edule HOM05D000228 ORTHO05D005112 9.0e-35 151.8 398 30.9
Sp5g04970 Schrenkiella parvula HOM05D000228 ORTHO05D005112 1.2e-34 151.4 391 31.5
Hund24743 Selenicereus undatus HOM05D000228 ORTHO05D005112 1.2e-34 151.4 401 31.7
CsaV3_3G039160 Cucumis sativus L. HOM05D000228 ORTHO05D005112 2.0e-34 150.6 384 32.8
Cpa.g.sc92.7 Carica papaya HOM05D000228 ORTHO05D005112 2.6e-34 150.2 217 40.6
PSO339G5840 Papaver somniferum HOM05D000228 ORTHO05D005112 3.4e-34 149.8 406 29.6
AUR62020165 Chenopodium quinoa HOM05D000228 ORTHO05D005112 2.2e-33 147.1 346 34.1
PSO384G0893 Papaver somniferum HOM05D000228 ORTHO05D005112 2.2e-33 147.1 408 29.4
FvH4_6g23210 Fragaria vesca HOM05D000228 ORTHO05D005112 3.8e-33 146.4 396 31.8
Thhalv10005738m.g Eutrema salsugineum HOM05D000228 ORTHO05D005112 5.0e-33 146.0 393 30.3
VMungo0720G2391 Vigna mungo HOM05D000228 ORTHO05D005112 5.0e-33 146.0 389 29.6
AL5G39280 Arabidopsis lyrata HOM05D000228 ORTHO05D005112 4.2e-32 142.9 397 30.7
FAN05G0345 Fragaria x ananassa HOM05D000228 ORTHO05D005112 4.2e-32 142.9 397 32.0
RcHm_v2.0_Chr3g0481021 Rosa chinensis HOM05D000228 ORTHO05D005112 4.2e-32 142.9 309 34.3
CARHR167900 Cardamine hirsuta HOM05D000228 ORTHO05D005112 7.2e-32 142.1 391 31.5
AUR62043125 Chenopodium quinoa HOM05D000228 ORTHO05D005112 7.2e-32 142.1 394 29.7
Ca_27020_v3 Cicer arietinum L. HOM05D000228 ORTHO05D005112 7.2e-32 142.1 405 29.6
FAN02G2218 Fragaria x ananassa HOM05D000228 ORTHO05D005112 7.2e-32 142.1 397 32.0
FAN14G5358 Fragaria x ananassa HOM05D000228 ORTHO05D005112 7.2e-32 142.1 217 40.6
BcaC07g40146 Brassica carinata HOM05D000228 ORTHO05D005112 1.2e-31 141.4 391 29.9
Ca_25862_v3 Cicer arietinum L. HOM05D000228 ORTHO05D005112 1.2e-31 141.4 421 28.5
Eucgr.K01811 Eucalyptus grandis HOM05D000228 ORTHO05D005112 1.6e-31 141.0 289 37.0
SGA_v2.0_scaffold522G52702 Striga asiatica HOM05D000228 ORTHO05D005112 2.7e-31 140.2 399 29.6
EL10Ac2g03322 Beta vulgaris HOM05D000228 ORTHO05D005112 3.6e-31 139.8 398 30.9
ClCG10G017230 Citrullus lanatus HOM05D000228 ORTHO05D005112 3.6e-31 139.8 395 29.6
FAN09G2168 Fragaria x ananassa HOM05D000228 ORTHO05D005112 6.1e-31 139.0 397 31.7
A09p50510 Brassica napus HOM05D000228 ORTHO05D005112 1.0e-30 138.3 391 30.2
BraA09t40502Z Brassica rapa HOM05D000228 ORTHO05D005112 1.0e-30 138.3 391 30.2
BolC8t50924H Brassica oleracea HOM05D000228 ORTHO05D005112 1.3e-30 137.9 396 30.6
Lj5g0016256 Lotus japonicus HOM05D000228 ORTHO05D005112 1.3e-30 137.9 395 31.4
BcaC07g40356 Brassica carinata HOM05D000228 ORTHO05D005112 3.0e-30 136.7 396 30.3
C08p33230 Brassica napus HOM05D000228 ORTHO05D005112 3.0e-30 136.7 396 30.3
AT3G57660 Arabidopsis thaliana HOM05D000228 ORTHO05D005112 3.9e-30 136.3 389 30.1
BraA07t30016Z Brassica rapa HOM05D000228 ORTHO05D005112 6.7e-30 135.6 404 27.2
Psat7g085520 Pisum sativum HOM05D000228 ORTHO05D005112 8.7e-30 135.2 379 30.1
TPR.G28490 Trifolium pratense HOM05D000228 ORTHO05D005112 1.5e-29 134.4 396 29.3
A07p23580 Brassica napus HOM05D000228 ORTHO05D005112 1.9e-29 134.0 404 27.2
Prupe.7G067700 Prunus persica HOM05D000228 ORTHO05D005112 4.3e-29 132.9 385 31.9
MD12G1066600 Malus domestica HOM05D000228 ORTHO05D005112 2.2e-28 130.6 378 28.8
AUR62039171 Chenopodium quinoa HOM05D000228 ORTHO05D005112 2.8e-28 130.2 394 29.4
FvH4_5g35030 Fragaria vesca HOM05D000228 ORTHO05D005112 4.8e-28 129.4 310 31.6
DCAR_020471 Daucus carota HOM05D000228 ORTHO05D005112 8.2e-28 128.6 405 28.4
Lalb_Chr09g0325001 Lupinus albus HOM05D000228 ORTHO05D005112 1.4e-27 127.9 396 28.8
Medtr4g086290 Medicago truncatula HOM05D000228 ORTHO05D005112 2.4e-27 127.1 380 30.0
FvH4_5g34330 Fragaria vesca HOM05D000228 ORTHO05D005112 3.1e-27 126.7 310 32.9
Haze_19911 Corylus avellana HOM05D000228 ORTHO05D005112 4.1e-27 126.3 394 30.5
Lalb_Chr16g0380371 Lupinus albus HOM05D000228 ORTHO05D005112 4.5e-26 122.9 395 28.1
BcaB02g07586 Brassica carinata HOM05D000228 ORTHO05D005112 3.8e-25 119.8 392 29.3
EL10Ac1g00656 Beta vulgaris HOM05D000228 ORTHO05D005112 1.1e-24 118.2 393 29.3
EL10Ac1g00646 Beta vulgaris HOM05D000228 ORTHO05D005112 3.2e-24 116.7 390 30.8
Ah.13g070880 Amaranthus hybridus HOM05D000228 ORTHO05D005112 7.2e-24 115.5 225 36.4
AUR62032979 Chenopodium quinoa HOM05D000228 ORTHO05D005112 1.0e-22 111.7 415 27.5
Lj7C597G6 Lonicera japonica HOM05D000228 ORTHO05D005112 2.6e-21 107.1 179 38.5
BcaC08g44860 Brassica carinata HOM05D000228 ORTHO05D005112 4.3e-21 106.3 371 27.2
Hma1.2p1_0621F.1_g190680 Hydrangea macrophylla HOM05D000228 ORTHO05D005112 4.3e-21 106.3 108 51.9
C06p24710 Brassica napus HOM05D000228 ORTHO05D005112 7.4e-21 105.5 358 27.7
Aqoxy1G00159 Aquilegia oxysepala HOM05D000228 ORTHO05D005112 1.8e-19 100.9 419 26.7
SEGI_33162 Sequoiadendron giganteum HOM05D000228 ORTHO05D005112 1.8e-19 100.9 259 29.0
CDE04G1016 Ceratophyllum demersum HOM05D000228 ORTHO05D005112 3.1e-19 100.1 371 26.4
Lsat_1_v5_gn_6_77720 Lactuca sativa HOM05D000228 ORTHO05D005112 2.7e-15 87.0 147 37.4
Lsat_1_v5_gn_3_139821 Lactuca sativa HOM05D000228 ORTHO05D005112 6.1e-15 85.9 57 64.9
Sc20g0005060 Simmondsia chinensis HOM05D000228 ORTHO05D005112 1.4e-14 84.7 287 28.2
HPP92_015356 Vanilla planifolia HOM05D000228 ORTHO05D005112 5.2e-14 82.8 249 27.3
Lj7A597G62 Lonicera japonica HOM05D000228 ORTHO05D005112 8.8e-14 82.0 106 50.9
Hma1.2p1_0621F.1_g190690 Hydrangea macrophylla HOM05D000228 ORTHO05D005112 1.1e-13 81.6 56 64.3
Sabra16G0056100 Salix brachista HOM05D000228 ORTHO05D005112 2.6e-10 70.5 55 58.2
AUR62032982 Chenopodium quinoa HOM05D000228 ORTHO05D005112 5.9e-10 69.3 53 56.6
Pp3c14_2730 Physcomitrium patens HOM05D000228 ORTHO05D005112 1.0e-09 68.6 217 28.1
ATR0605G316 Amborella trichopoda HOM05D000228 ORTHO05D005112 2.2e-09 67.4 224 27.2
TAR636G1992 Trochodendron aralioides HOM05D000228 ORTHO05D005112 1.5e-08 64.7 43 74.4
PSO384G4723 Papaver somniferum HOM05D000228 ORTHO05D050186 5.5e-08 62.8 92 39.1
TAR636G1988 Trochodendron aralioides HOM05D000228 ORTHO05D050186 5.5e-08 62.8 108 36.1
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 9.4e-08 62.0 53 52.8
MD14G1066900 Malus domestica HOM05D000228 ORTHO05D013213 1.6e-07 61.2 212 25.9
Glyma.02G181200 Glycine max HOM05D000228 ORTHO05D005112 4.7e-07 59.7 208 26.9
Mapoly0053s0083 Marchantia polymorpha HOM05D000228 ORTHO05D005112 3.0e-06 57.0 327 22.6
Zm00001eb016000 Zea mays HOM05D000228 ORTHO05D005112 5.2e-06 56.2 233 26.2
AagrBONN_evm.TU.Sc2ySwM_117.4097 Anthoceros agrestis HOM05D000228 ORTHO05D005112 8.8e-06 55.5 55 47.3


User provided reference genes

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