Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010753g0030 Nicotiana tabacum HOM05D004503 ORTHO05D005460 4.7e-67 257.7 126 100.0
Nitab4.5_0002251g0070 Nicotiana tabacum HOM05D004503 ORTHO05D005460 3.2e-55 218.4 116 90.5
Nitab4.5_0027860g0010 Nicotiana tabacum HOM05D004503 ORTHO05D005460 5.9e-54 214.2 116 88.8
Solyc07g056220.3 Solanum lycopersicum HOM05D004503 ORTHO05D005460 4.4e-49 198.0 116 83.6
Sopen07g029580 Solanum pennellii HOM05D004503 ORTHO05D005460 4.4e-49 198.0 116 83.6
PGSC0003DMG400017305 Solanum tuberosum HOM05D004503 ORTHO05D005460 8.3e-48 193.7 116 81.9
Peaxi162Scf00111g00222 Petunia axillaris HOM05D004503 ORTHO05D005460 1.4e-47 193.0 116 81.9
CAN.G585.22 Capsicum annuum HOM05D004503 ORTHO05D005460 7.0e-47 190.7 116 81.0
Dinv07955 Davidia involucrata HOM05D004503 ORTHO05D005460 4.3e-44 181.4 116 76.7
CSS0024997 Camellia sinensis var. sinensis HOM05D004503 ORTHO05D005460 7.3e-44 180.6 116 75.0
Lj1C677T5 Lonicera japonica HOM05D004503 ORTHO05D005460 1.6e-43 179.5 116 72.4
Cc05_g09730 Coffea canephora HOM05D004503 ORTHO05D005460 1.4e-42 176.4 116 72.4
TAR629G1355 Trochodendron aralioides HOM05D004503 ORTHO05D005460 4.4e-41 171.4 116 71.6
Nn4g24335 Nelumbo nucifera HOM05D004503 ORTHO05D005460 9.8e-41 170.2 116 69.8
vmacro08730 Vaccinium macrocarpon HOM05D004503 ORTHO05D005460 9.8e-41 170.2 116 70.7
Lsat_1_v5_gn_8_31680 Lactuca sativa HOM05D004503 ORTHO05D005460 4.9e-40 167.9 115 70.4
vmacro23147 Vaccinium macrocarpon HOM05D004503 ORTHO05D005460 1.1e-39 166.8 135 64.4
Oeu010987.1 Olea europaea HOM05D004503 ORTHO05D005460 1.9e-39 166.0 116 67.2
Rhsim12G0009900 Rhododendron simsii HOM05D004503 ORTHO05D005460 9.2e-39 163.7 116 69.0
GSVIVG01020844001 Vitis vinifera HOM05D004503 ORTHO05D005460 2.7e-38 162.2 116 67.2
HanXRQChr13g0387771 Helianthus annuus HOM05D004503 ORTHO05D005460 3.0e-37 158.7 115 67.0
HanXRQChr13g0403751 Helianthus annuus HOM05D004503 ORTHO05D005460 3.0e-37 158.7 115 67.0
MBI10_g02225_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 1.5e-36 156.4 110 63.6
MBI10_g05864_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 1.5e-36 156.4 110 63.6
AUR62026613 Chenopodium quinoa HOM05D004503 ORTHO05D005460 5.6e-36 154.5 119 63.0
AUR62034921 Chenopodium quinoa HOM05D004503 ORTHO05D005460 1.2e-35 153.3 119 62.2
EL10Ac1g01630 Beta vulgaris HOM05D004503 ORTHO05D005460 2.1e-35 152.5 120 62.5
HPP92_024256 Vanilla planifolia HOM05D004503 ORTHO05D005460 2.1e-35 152.5 111 66.7
HPP92_024264 Vanilla planifolia HOM05D004503 ORTHO05D005460 2.1e-35 152.5 111 66.7
Migut.M00558 Erythranthe guttata HOM05D004503 ORTHO05D005460 8.1e-35 150.6 116 62.1
ECA233G4498 Erigeron canadensis HOM05D004503 ORTHO05D005460 1.8e-34 149.4 117 63.2
PSO675G5402 Papaver somniferum HOM05D004503 ORTHO05D005460 1.8e-34 149.4 116 62.1
PSO063G7036 Papaver somniferum HOM05D004503 ORTHO05D005460 8.9e-34 147.1 116 61.2
SEGI_01586 Sequoiadendron giganteum HOM05D004503 ORTHO05D005460 1.2e-33 146.7 119 58.0
SGA_v2.0_scaffold70G23615 Striga asiatica HOM05D004503 ORTHO05D005460 3.4e-33 145.2 116 59.5
Aqoxy1G01732 Aquilegia oxysepala HOM05D004503 ORTHO05D005460 5.8e-33 144.4 116 58.6
MBI10_g21107_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 5.8e-33 144.4 99 67.7
Sc09g0009430 Simmondsia chinensis HOM05D004503 ORTHO05D005460 9.9e-33 143.7 120 58.3
DCAR_013322 Daucus carota HOM05D004503 ORTHO05D005460 1.7e-32 142.9 106 62.3
Actinidia12541 Actinidia chinensis HOM05D004503 ORTHO05D005460 1.9e-31 139.4 129 59.7
MSTRG.6739 Avicennia marina HOM05D004503 ORTHO05D005460 2.4e-31 139.0 116 58.6
arahy.Tifrunner.gnm1.ann1.S01VYL Arachis hypogaea HOM05D004503 ORTHO05D005460 4.1e-31 138.3 124 58.1
arahy.Tifrunner.gnm1.ann1.96CX7H Arachis hypogaea HOM05D004503 ORTHO05D005460 9.2e-31 137.1 124 57.3
Hund26670 Selenicereus undatus HOM05D004503 ORTHO05D005460 9.2e-31 137.1 112 59.8
MD17G1136200 Malus domestica HOM05D004503 ORTHO05D005460 1.2e-30 136.7 119 58.8
Prupe.3G176600 Prunus persica HOM05D004503 ORTHO05D005460 3.5e-30 135.2 119 58.0
RcHm_v2.0_Chr2g0152001 Rosa chinensis HOM05D004503 ORTHO05D005460 6.0e-30 134.4 119 56.3
Sed0003027 Sechium edule HOM05D004503 ORTHO05D005460 6.0e-30 134.4 119 58.0
COL.COLO4_08894 Corchorus olitorius HOM05D004503 ORTHO05D005460 7.8e-30 134.0 119 57.1
Lalb_Chr07g0191281 Lupinus albus HOM05D004503 ORTHO05D005460 7.8e-30 134.0 123 56.9
Ah.05g168350 Amaranthus hybridus HOM05D004503 ORTHO05D005460 1.0e-29 133.7 109 59.6
ClCG11G016490 Citrullus lanatus HOM05D004503 ORTHO05D005460 1.0e-29 133.7 119 58.0
FvH4_6g38590 Fragaria vesca HOM05D004503 ORTHO05D005460 1.3e-29 133.3 119 55.5
FAN02G3131 Fragaria x ananassa HOM05D004503 ORTHO05D005460 1.3e-29 133.3 119 55.5
FAN05G2445 Fragaria x ananassa HOM05D004503 ORTHO05D005460 1.3e-29 133.3 119 55.5
FAN09G1308 Fragaria x ananassa HOM05D004503 ORTHO05D005460 1.3e-29 133.3 119 55.5
TWI14G0297 Tripterygium wilfordii HOM05D004503 ORTHO05D005460 3.0e-29 132.1 123 56.1
Eucgr.A02017 Eucalyptus grandis HOM05D004503 ORTHO05D005460 5.1e-29 131.3 125 55.2
FAN14G5858 Fragaria x ananassa HOM05D004503 ORTHO05D005460 5.1e-29 131.3 119 54.6
Gohir.A07G183000 Gossypium hirsutum HOM05D004503 ORTHO05D005460 6.6e-29 131.0 119 55.5
Gohir.D07G189800 Gossypium hirsutum HOM05D004503 ORTHO05D005460 6.6e-29 131.0 119 55.5
Gorai.001G211500 Gossypium raimondii HOM05D004503 ORTHO05D005460 6.6e-29 131.0 119 55.5
CANSAT64G0633 Cannabis sativa HOM05D004503 ORTHO05D005460 8.6e-29 130.6 119 56.3
MELO3C026971.2 Cucumis melo HOM05D004503 ORTHO05D005460 1.1e-28 130.2 119 56.3
Glyma.08G307900 Glycine max HOM05D004503 ORTHO05D005460 3.3e-28 128.6 119 55.5
Phvul.006G022400 Phaseolus vulgaris HOM05D004503 ORTHO05D005460 7.3e-28 127.5 119 55.5
Glyma.18G109800 Glycine max HOM05D004503 ORTHO05D005460 9.6e-28 127.1 119 55.5
VMungo0647G0468 Vigna mungo HOM05D004503 ORTHO05D005460 9.6e-28 127.1 119 55.5
Cpa.g.sc648.4 Carica papaya HOM05D004503 ORTHO05D005460 1.2e-27 126.7 123 52.8
CsaV3_4G031940 Cucumis sativus L. HOM05D004503 ORTHO05D005460 1.6e-27 126.3 119 55.5
Thecc.01G170000 Theobroma cacao HOM05D004503 ORTHO05D005460 2.8e-27 125.6 119 54.6
ATR0772G123 Amborella trichopoda HOM05D004503 ORTHO05D005460 4.7e-27 124.8 131 47.3
Duzib138G1342 Durio zibethinus HOM05D004503 ORTHO05D005460 4.7e-27 124.8 119 52.1
PGR042G1526 Punica granatum HOM05D004503 ORTHO05D005460 2.4e-26 122.5 122 55.7
Ca_14599_v3 Cicer arietinum L. HOM05D004503 ORTHO05D005460 4.0e-26 121.7 125 53.6
Psat5g185680 Pisum sativum HOM05D004503 ORTHO05D005460 5.2e-26 121.3 125 53.6
Medtr0071s0030 Medicago truncatula HOM05D004503 ORTHO05D005460 6.8e-26 120.9 125 52.8
Medtr3g046640 Medicago truncatula HOM05D004503 ORTHO05D005460 6.8e-26 120.9 125 52.8
Mapoly0052s0038 Marchantia polymorpha HOM05D004503 ORTHO05D005460 8.9e-26 120.6 115 51.3
Lj6g0014906 Lotus japonicus HOM05D004503 ORTHO05D005460 2.6e-25 119.0 123 52.0
AagrBONN_evm.TU.Sc2ySwM_368.858 Anthoceros agrestis HOM05D004503 ORTHO05D005460 4.4e-25 118.2 115 51.3
Pp3c13_19740 Physcomitrium patens HOM05D004503 ORTHO05D005460 9.9e-25 117.1 119 48.7
CiPaw.13G152400 Carya illinoinensis HOM05D004503 ORTHO05D005460 4.9e-24 114.8 127 51.2
Os01g0666800 Oryza sativa ssp. japonica HOM05D004503 ORTHO05D005460 5.4e-23 111.3 125 48.0
SMO358G0621 Selaginella moellendorffii HOM05D004503 ORTHO05D005460 5.4e-23 111.3 115 47.8
Aa31LG5G23690 Aethionema arabicum HOM05D004503 ORTHO05D005460 7.8e-22 107.5 138 46.4
Haze_23205 Corylus avellana HOM05D004503 ORTHO05D005460 1.0e-21 107.1 113 51.3
QL01p017640 Quercus lobata HOM05D004503 ORTHO05D005460 1.0e-21 107.1 128 46.9
Cfa009838 Carpinus fangiana HOM05D004503 ORTHO05D005460 1.3e-21 106.7 113 51.3
Manes.02G088300 Manihot esculenta HOM05D004503 ORTHO05D005460 1.7e-21 106.3 121 48.8
THA.LOC104826541 Tarenaya hassleriana HOM05D004503 ORTHO05D005460 2.3e-21 105.9 136 45.6
Sabra05G0155000 Salix brachista HOM05D004503 ORTHO05D005460 3.9e-21 105.1 121 47.9
Potri.005G204400 Populus trichocarpa HOM05D004503 ORTHO05D005460 5.1e-21 104.8 121 47.1
Potri.002G057800 Populus trichocarpa HOM05D004503 ORTHO05D005460 1.5e-20 103.2 123 47.2
BcaNung06337 Brassica carinata HOM05D004503 ORTHO05D005460 2.5e-20 102.4 138 43.5
Thhalv10016232m.g Eutrema salsugineum HOM05D004503 ORTHO05D005460 2.5e-20 102.4 138 44.2
Atru.chr6.2055 Acer truncatum HOM05D004503 ORTHO05D005460 4.3e-20 101.7 121 45.5
Sp4g20340 Schrenkiella parvula HOM05D004503 ORTHO05D005460 5.6e-20 101.3 138 42.8
A03p21010 Brassica napus HOM05D004503 ORTHO05D005460 7.3e-20 100.9 138 42.8
BraA03t11340Z Brassica rapa HOM05D004503 ORTHO05D005460 7.3e-20 100.9 138 42.8
Ciclev10030701m.g Citrus clementina HOM05D004503 ORTHO05D005460 1.3e-19 100.1 115 45.2
BcaC01g05572 Brassica carinata HOM05D004503 ORTHO05D005460 2.1e-19 99.4 138 42.8
C03p24750 Brassica napus HOM05D004503 ORTHO05D005460 2.1e-19 99.4 138 42.8
BolC3t14864H Brassica oleracea HOM05D004503 ORTHO05D005460 2.1e-19 99.4 138 42.8
CARHR132590 Cardamine hirsuta HOM05D004503 ORTHO05D005460 1.1e-18 97.1 138 42.0
Carub.0004s1999 Capsella rubella HOM05D004503 ORTHO05D005460 1.4e-18 96.7 138 42.8
SHI12362 Sapria himalayana HOM05D004503 ORTHO05D005460 5.8e-17 91.3 120 40.0
AT2G38020 Arabidopsis thaliana HOM05D004503 ORTHO05D005460 3.8e-16 88.6 136 41.9
AL4G35000 Arabidopsis lyrata HOM05D004503 ORTHO05D005460 6.4e-16 87.8 136 41.9
BcaB01g03734 Brassica carinata HOM05D004503 ORTHO05D005460 1.4e-15 86.7 108 42.6
CBR_g46726 Chara braunii HOM05D004503 ORTHO05D005460 4.2e-15 85.1 110 35.5
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 4.2e-15 85.1 67 61.2
BcaC01g05574 Brassica carinata HOM05D004503 ORTHO05D005460 1.2e-14 83.6 108 41.7
Actinidia25072 Actinidia chinensis HOM05D004503 ORTHO05D005460 1.0e-13 80.5 61 72.1
Lsat_1_v5_gn_6_24580 Lactuca sativa HOM05D003889 ORTHO05D004407 2.2e-08 62.8 75 48.0
Cfa025981 Carpinus fangiana HOM05D004503 ORTHO05D005460 8.4e-08 60.8 110 28.2


User provided reference genes

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