Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.0e-162 575.9 329 100.0
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 1.4e-147 526.6 330 90.0
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 5.2e-142 508.1 331 87.6
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 5.2e-142 508.1 331 87.3
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 1.8e-134 483.0 333 86.5
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 2.3e-134 482.6 332 85.8
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.2e-132 476.1 329 78.4
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 6.4e-132 474.6 332 84.0
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 2.7e-130 469.2 333 83.5
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.5e-128 463.4 305 88.2
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 3.7e-124 448.7 331 79.5
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 3.7e-124 448.7 332 79.5
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 1.1e-123 447.2 336 78.9
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 1.4e-123 446.8 331 79.2
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 4.1e-123 445.3 333 76.9
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 7.1e-123 444.5 331 77.9
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 1.6e-122 443.4 331 79.2
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.3e-121 439.5 308 76.6
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 2.3e-121 439.5 335 77.3
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 3.9e-121 438.7 332 78.3
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 5.1e-121 438.3 335 77.9
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 6.6e-121 438.0 331 78.5
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 1.5e-120 436.8 333 76.9
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 7.3e-120 434.5 341 75.7
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 3.6e-119 432.2 329 77.5
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 4.7e-119 431.8 331 75.5
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 6.2e-119 431.4 332 76.2
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 6.2e-119 431.4 307 85.7
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 8.1e-119 431.0 331 75.2
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 2.4e-118 429.5 276 88.4
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 3.1e-118 429.1 326 77.6
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 5.2e-118 428.3 326 77.9
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 5.2e-118 428.3 332 76.5
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 1.2e-117 427.2 333 75.4
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.2e-117 427.2 331 75.2
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 1.5e-117 426.8 331 76.1
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 4.4e-117 425.2 333 76.3
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 5.8e-117 424.9 334 74.9
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 7.6e-117 424.5 326 77.0
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 1.7e-116 423.3 332 74.7
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 8.4e-116 421.0 331 75.5
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.1e-115 420.6 326 77.3
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 1.1e-115 420.6 331 75.5
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 3.2e-115 419.1 326 75.2
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 4.1e-115 418.7 331 74.3
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 4.1e-115 418.7 381 68.2
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 4.1e-115 418.7 331 74.6
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 1.2e-114 417.2 331 74.3
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 1.0e-113 414.1 331 74.0
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 1.7e-113 413.3 333 74.5
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 1.7e-113 413.3 331 73.4
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.7e-113 413.3 333 73.6
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 3.0e-113 412.5 334 74.6
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 3.0e-113 412.5 331 74.6
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 3.9e-113 412.1 331 74.6
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 3.9e-113 412.1 333 73.0
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 5.1e-113 411.8 331 74.6
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 5.1e-113 411.8 333 73.6
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 6.6e-113 411.4 333 73.3
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 6.6e-113 411.4 345 72.8
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 8.7e-113 411.0 332 73.8
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 1.1e-112 410.6 330 73.9
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 1.9e-112 409.8 333 73.9
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 1.9e-112 409.8 285 81.8
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 2.5e-112 409.5 334 74.3
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 3.3e-112 409.1 330 73.6
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 3.3e-112 409.1 333 73.6
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 4.3e-112 408.7 330 73.9
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 5.6e-112 408.3 331 72.8
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 7.3e-112 407.9 334 75.1
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 7.3e-112 407.9 330 73.3
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 7.3e-112 407.9 331 73.7
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 1.2e-111 407.1 330 73.9
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 1.2e-111 407.1 330 73.6
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 1.2e-111 407.1 333 73.0
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 1.6e-111 406.8 332 73.5
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 2.1e-111 406.4 332 73.2
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 2.1e-111 406.4 338 71.0
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 2.1e-111 406.4 326 74.8
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 2.8e-111 406.0 334 74.6
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 3.6e-111 405.6 331 73.1
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 3.6e-111 405.6 331 72.8
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 8.1e-111 404.4 364 69.8
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 1.1e-110 404.1 332 74.7
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 1.4e-110 403.7 335 74.3
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 1.4e-110 403.7 331 74.6
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.4e-110 403.7 260 80.0
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 2.4e-110 402.9 327 73.4
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 2.4e-110 402.9 327 73.4
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 2.4e-110 402.9 334 74.3
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 2.4e-110 402.9 330 71.8
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 4.0e-110 402.1 331 72.5
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 4.0e-110 402.1 331 72.5
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 4.0e-110 402.1 334 72.8
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 4.0e-110 402.1 329 74.5
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 5.2e-110 401.7 327 73.1
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 5.2e-110 401.7 331 72.8
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 5.2e-110 401.7 331 72.8
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 6.9e-110 401.4 259 88.8
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 6.9e-110 401.4 334 73.4
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 9.0e-110 401.0 327 73.1
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 9.0e-110 401.0 327 73.1
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 9.0e-110 401.0 331 72.8
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 1.5e-109 400.2 330 72.4
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 1.5e-109 400.2 331 72.8
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 2.0e-109 399.8 345 70.7
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 9.9e-109 397.5 333 73.3
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 9.9e-109 397.5 309 76.1
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 1.3e-108 397.1 329 71.4
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.3e-108 397.1 323 74.0
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 1.7e-108 396.7 322 73.9
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 3.8e-108 395.6 276 82.6
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 3.8e-108 395.6 328 72.9
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 6.4e-108 394.8 327 72.8
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 8.4e-108 394.4 332 72.6
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.4e-107 393.7 311 75.6
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 1.9e-107 393.3 327 72.8
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.9e-107 393.3 330 71.2
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.2e-107 392.5 343 69.7
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 4.2e-107 392.1 312 75.3
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 4.2e-107 392.1 364 70.6
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 7.1e-107 391.3 330 70.9
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 7.1e-107 391.3 329 70.2
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 9.3e-107 391.0 326 71.8
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.0e-106 388.3 330 71.2
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 6.0e-106 388.3 333 70.3
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.0e-105 387.5 330 72.4
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.3e-105 386.3 333 70.0
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 2.3e-105 386.3 328 72.3
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 3.0e-105 386.0 307 75.6
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 3.9e-105 385.6 261 87.0
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.6e-105 384.8 333 70.0
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 8.7e-105 384.4 329 70.2
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.1e-104 384.0 329 70.2
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.5e-104 383.6 330 70.6
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 4.3e-104 382.1 332 70.2
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.3e-103 380.6 329 70.2
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 1.2e-101 374.0 273 77.3
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 5.8e-101 371.7 305 73.8
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 6.0e-98 361.7 329 68.1
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.8e-97 360.1 324 68.8
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 1.8e-94 350.1 266 75.2
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.6e-93 346.3 231 86.1
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.4e-91 339.7 231 84.8
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 7.1e-91 338.2 318 68.6
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 9.3e-91 337.8 250 82.0
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 3.9e-89 332.4 345 64.3
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.6e-88 328.6 331 63.7
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.6e-88 328.6 331 63.7
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 2.0e-85 320.1 277 67.5
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 1.8e-81 307.0 267 65.5
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 2.2e-79 300.1 271 63.5
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.8e-78 297.0 294 58.2
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 3.4e-77 292.7 244 76.2
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 1.4e-75 287.3 250 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 1.9e-75 287.0 251 60.2
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 1.8e-73 280.4 248 76.2
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 1.9e-72 276.9 264 70.5
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 1.9e-72 276.9 196 83.7
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 3.4e-69 266.2 241 73.9
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 1.9e-59 233.8 269 48.7
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 5.5e-59 232.3 291 50.9
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 9.7e-56 221.5 149 74.5
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 4.5e-53 212.6 125 82.4
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 5.0e-52 209.1 149 73.8
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.0e-49 201.4 196 71.4
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 8.2e-47 191.8 124 73.4
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.0e-40 170.6 231 57.6
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.2e-37 161.4 122 72.1
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 2.6e-32 143.7 100 79.0
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.7e-31 141.0 261 39.5
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 4.1e-30 136.3 135 57.0
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 1.6e-29 134.4 108 73.1
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 5.9e-29 132.5 96 70.8
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 1.1e-22 111.7 76 75.0
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.1e-19 101.7 143 56.6
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 3.1e-17 93.6 83 81.9
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 4.0e-17 93.2 143 55.9
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 4.0e-17 93.2 107 65.4
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 1.9e-14 84.3 122 45.9
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 1.2e-10 71.6 93 45.2
CAN.G835.4 Capsicum annuum HOM05D000091 ORTHO05D003679 1.1e-06 58.5 36 83.3
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 7.1e-06 55.8 109 26.6


User provided reference genes

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