Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009486g0030 Nicotiana tabacum HOM05D005494 ORTHO05D006689 1.4e-195 686.0 342 100.0
Nitab4.5_0000642g0180 Nicotiana tabacum HOM05D005494 ORTHO05D006689 3.3e-184 648.3 372 88.4
Peaxi162Scf00017g02118 Petunia axillaris HOM05D005494 ORTHO05D006689 2.7e-173 612.1 360 84.7
PGSC0003DMG400024571 Solanum tuberosum HOM05D005494 ORTHO05D006689 9.5e-171 603.6 360 83.9
Solyc03g113610.4 Solanum lycopersicum HOM05D005494 ORTHO05D006689 4.7e-170 601.3 360 83.6
Sopen03g032650 Solanum pennellii HOM05D005494 ORTHO05D006689 1.8e-169 599.4 360 83.6
CAN.G999.3 Capsicum annuum HOM05D005494 ORTHO05D006689 9.2e-158 560.5 360 80.3
CSS0010415 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 1.3e-148 530.0 363 72.2
CSS0047784 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 1.3e-148 530.0 363 72.2
Dinv13115 Davidia involucrata HOM05D005494 ORTHO05D006689 1.2e-146 523.5 361 71.5
Actinidia04945 Actinidia chinensis HOM05D005494 ORTHO05D006689 3.4e-144 515.4 361 71.5
Dinv07986 Davidia involucrata HOM05D005494 ORTHO05D006689 9.9e-144 513.8 361 70.6
Hma1.2p1_0572F.1_g181100 Hydrangea macrophylla HOM05D005494 ORTHO05D006689 4.1e-142 508.4 357 71.1
QL10p014050 Quercus lobata HOM05D005494 ORTHO05D006689 1.0e-140 503.8 361 70.9
GSVIVG01008098001 Vitis vinifera HOM05D005494 ORTHO05D006689 5.1e-140 501.5 361 69.0
Duzib084G0032 Durio zibethinus HOM05D005494 ORTHO05D006689 8.6e-140 500.7 353 70.8
Cfa019036 Carpinus fangiana HOM05D005494 ORTHO05D006689 1.9e-139 499.6 355 69.6
Ciclev10020622m.g Citrus clementina HOM05D005494 ORTHO05D006689 3.6e-138 495.4 351 69.5
Prupe.5G182300 Prunus persica HOM05D005494 ORTHO05D006689 8.1e-138 494.2 361 67.9
Gorai.008G189500 Gossypium raimondii HOM05D005494 ORTHO05D006689 1.8e-137 493.0 361 67.9
Gohir.D12G177100 Gossypium hirsutum HOM05D005494 ORTHO05D006689 2.4e-137 492.7 361 67.6
CiPaw.11G034500 Carya illinoinensis HOM05D005494 ORTHO05D006689 3.1e-137 492.3 361 68.1
Haze_07413 Corylus avellana HOM05D005494 ORTHO05D006689 1.5e-136 490.0 390 64.4
Gohir.A12G174400 Gossypium hirsutum HOM05D005494 ORTHO05D006689 9.9e-136 487.3 361 67.3
Oeu038310.1 Olea europaea HOM05D005494 ORTHO05D006689 9.9e-136 487.3 351 68.9
COL.COLO4_07634 Corchorus olitorius HOM05D005494 ORTHO05D006689 2.2e-135 486.1 361 69.0
TAR629G2056 Trochodendron aralioides HOM05D005494 ORTHO05D006689 2.2e-135 486.1 363 66.9
Potri.012G073500 Populus trichocarpa HOM05D005494 ORTHO05D006689 4.9e-135 485.0 358 65.9
Thecc.10G120900 Theobroma cacao HOM05D005494 ORTHO05D006689 4.9e-135 485.0 351 68.9
CANSAT80G2452 Cannabis sativa HOM05D005494 ORTHO05D006689 1.1e-134 483.8 360 66.9
MSTRG.9655 Avicennia marina HOM05D005494 ORTHO05D006689 1.4e-134 483.4 361 69.0
Sabra12G0052300 Salix brachista HOM05D005494 ORTHO05D006689 3.2e-134 482.3 358 66.2
SGA_v2.0_scaffold7G04099 Striga asiatica HOM05D005494 ORTHO05D006689 7.1e-134 481.1 361 68.4
TWI09G1329 Tripterygium wilfordii HOM05D005494 ORTHO05D006689 6.0e-133 478.0 361 66.2
ClCG01G014230 Citrullus lanatus HOM05D005494 ORTHO05D006689 1.1e-131 473.8 362 65.7
DCAR_026093 Daucus carota HOM05D005494 ORTHO05D006689 5.6e-131 471.5 361 66.2
Phvul.004G010600 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 9.6e-131 470.7 355 65.1
Rhsim08G0163400 Rhododendron simsii HOM05D005494 ORTHO05D006689 2.1e-130 469.5 404 62.9
CsaV3_1G008090 Cucumis sativus L. HOM05D005494 ORTHO05D006689 3.6e-130 468.8 362 65.2
Glyma.05G004700 Glycine max HOM05D005494 ORTHO05D006689 4.7e-130 468.4 355 65.1
RcHm_v2.0_Chr7g0180051 Rosa chinensis HOM05D005494 ORTHO05D006689 1.1e-129 467.2 358 65.4
Hund09389 Selenicereus undatus HOM05D005494 ORTHO05D006689 6.9e-129 464.5 352 66.5
Nn3g17064 Nelumbo nucifera HOM05D005494 ORTHO05D006689 3.4e-128 462.2 355 64.8
FAN04G1682 Fragaria x ananassa HOM05D005494 ORTHO05D006689 5.8e-128 461.5 358 64.5
VMungo0464G1007 Vigna mungo HOM05D005494 ORTHO05D006689 5.8e-128 461.5 355 63.9
Glyma.04G177200 Glycine max HOM05D005494 ORTHO05D006689 7.6e-128 461.1 355 63.4
Sed0009281 Sechium edule HOM05D005494 ORTHO05D006689 9.9e-128 460.7 362 64.9
Lj5C118G23 Lonicera japonica HOM05D005494 ORTHO05D006689 4.9e-127 458.4 319 72.1
vmacro19338 Vaccinium macrocarpon HOM05D005494 ORTHO05D006689 1.4e-126 456.8 459 54.9
FAN18G0952 Fragaria x ananassa HOM05D005494 ORTHO05D006689 7.1e-126 454.5 358 64.0
Lalb_Chr08g0236101 Lupinus albus HOM05D005494 ORTHO05D006689 1.6e-125 453.4 352 64.8
Cpa.g.sc30.67 Carica papaya HOM05D005494 ORTHO05D006689 2.1e-125 453.0 360 60.6
Lj1g0011553 Lotus japonicus HOM05D005494 ORTHO05D006689 2.7e-125 452.6 351 65.2
Manes.14G072100 Manihot esculenta HOM05D005494 ORTHO05D006689 1.3e-124 450.3 361 63.2
FAN13G0712 Fragaria x ananassa HOM05D005494 ORTHO05D006689 3.0e-124 449.1 378 61.9
AUR62008313 Chenopodium quinoa HOM05D005494 ORTHO05D006689 6.6e-124 448.0 351 65.5
arahy.Tifrunner.gnm1.ann1.Y2W2NU Arachis hypogaea HOM05D005494 ORTHO05D006689 1.5e-123 446.8 352 64.8
AUR62021784 Chenopodium quinoa HOM05D005494 ORTHO05D006689 1.9e-123 446.4 351 65.8
Ca_18065_v3 Cicer arietinum L. HOM05D005494 ORTHO05D006689 1.9e-123 446.4 351 63.5
Cc04_g16070 Coffea canephora HOM05D005494 ORTHO05D006689 3.3e-123 445.7 306 72.5
arahy.Tifrunner.gnm1.ann1.QI1X69 Arachis hypogaea HOM05D005494 ORTHO05D006689 1.3e-122 443.7 352 64.5
Psat7g041440 Pisum sativum HOM05D005494 ORTHO05D006689 1.3e-122 443.7 351 65.0
AUR62022932 Chenopodium quinoa HOM05D005494 ORTHO05D006689 3.6e-122 442.2 351 65.5
TAR622G0530 Trochodendron aralioides HOM05D005494 ORTHO05D006689 4.0e-121 438.7 341 65.4
Eucgr.B00382 Eucalyptus grandis HOM05D005494 ORTHO05D006689 2.6e-120 436.0 354 64.7
MD14G1189700 Malus domestica HOM05D005494 ORTHO05D006689 2.6e-120 436.0 389 58.6
MD14G1057100 Malus domestica HOM05D005494 ORTHO05D006689 5.8e-120 434.9 347 64.6
EL10Ac5g10874 Beta vulgaris HOM05D005494 ORTHO05D006689 9.9e-120 434.1 349 64.2
Migut.D01889 Erythranthe guttata HOM05D005494 ORTHO05D006689 4.9e-119 431.8 362 63.3
HanXRQChr02g0045331 Helianthus annuus HOM05D005494 ORTHO05D006689 8.4e-119 431.0 340 64.1
Sp6g32480 Schrenkiella parvula HOM05D005494 ORTHO05D006689 9.3e-118 427.6 345 60.9
MELO3C002226.2 Cucumis melo HOM05D005494 ORTHO05D006689 1.2e-117 427.2 363 61.4
Migut.N01938 Erythranthe guttata HOM05D005494 ORTHO05D006689 1.2e-117 427.2 360 63.9
THA.LOC104814121 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 2.1e-117 426.4 346 61.3
Thhalv10000203m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 2.7e-117 426.0 347 60.8
Oeu039559.2 Olea europaea HOM05D005494 ORTHO05D006689 1.1e-115 420.6 301 69.4
AT5G11010 Arabidopsis thaliana HOM05D005494 ORTHO05D006689 3.3e-115 419.1 345 58.6
HanXRQChr16g0516751 Helianthus annuus HOM05D005494 ORTHO05D006689 4.3e-115 418.7 337 64.1
THA.LOC104818279 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 5.6e-115 418.3 345 60.6
AL6G21610 Arabidopsis lyrata HOM05D005494 ORTHO05D006689 7.4e-115 417.9 345 58.3
Psat7g079600 Pisum sativum HOM05D005494 ORTHO05D006689 2.1e-114 416.4 351 60.1
Aa31LG3G16120 Aethionema arabicum HOM05D005494 ORTHO05D006689 2.8e-114 416.0 345 58.3
CARHR202280 Cardamine hirsuta HOM05D005494 ORTHO05D006689 8.1e-114 414.5 346 60.4
Carub.0006s0951 Capsella rubella HOM05D005494 ORTHO05D006689 1.4e-113 413.7 345 58.6
Aqoxy3G03184 Aquilegia oxysepala HOM05D005494 ORTHO05D006689 4.0e-113 412.1 361 58.2
Lsat_1_v5_gn_1_11340 Lactuca sativa HOM05D005494 ORTHO05D006689 6.9e-113 411.4 361 58.7
PSO591G0251 Papaver somniferum HOM05D005494 ORTHO05D006689 6.9e-113 411.4 357 58.0
PSO832G2211 Papaver somniferum HOM05D005494 ORTHO05D006689 2.2e-111 406.4 359 57.7
SHI07761 Sapria himalayana HOM05D005494 ORTHO05D006689 1.9e-110 403.3 360 57.8
MD06G1183600 Malus domestica HOM05D005494 ORTHO05D006689 5.5e-110 401.7 363 58.1
FvH4_5g16020 Fragaria vesca HOM05D005494 ORTHO05D006689 2.7e-109 399.4 316 62.7
Lsat_1_v5_gn_5_17360 Lactuca sativa HOM05D005494 ORTHO05D006689 2.4e-105 386.3 345 56.5
ECA247G2071 Erigeron canadensis HOM05D005494 ORTHO05D006689 9.0e-105 384.4 355 56.3
TPR.G17080 Trifolium pratense HOM05D005494 ORTHO05D006689 3.8e-103 379.0 367 55.0
Medtr8g080150 Medicago truncatula HOM05D005494 ORTHO05D006689 4.6e-101 372.1 349 57.0
Lj4g0024662 Lotus japonicus HOM05D005494 ORTHO05D006689 7.9e-101 371.3 332 59.0
Atru.chr9.2369 Acer truncatum HOM05D005494 ORTHO05D006689 1.1e-99 367.5 281 66.2
AUR62012293 Chenopodium quinoa HOM05D005494 ORTHO05D006689 4.3e-99 365.5 351 57.0
Medtr8g080140 Medicago truncatula HOM05D005494 ORTHO05D006689 1.3e-98 364.0 353 56.7
A10p26670 Brassica napus HOM05D005494 ORTHO05D006689 2.8e-98 362.8 346 53.2
C09p65840 Brassica napus HOM05D005494 ORTHO05D006689 6.3e-98 361.7 346 53.2
ATR0051G026 Amborella trichopoda HOM05D004526 ORTHO05D005548 3.8e-95 352.4 303 59.7
SEGI_00948 Sequoiadendron giganteum HOM05D005494 ORTHO05D006689 2.5e-94 349.7 378 50.3
unitig_8.g3614 Utricularia gibba HOM05D005494 ORTHO05D006689 4.2e-94 349.0 290 61.7
Aa31LG10G14040 Aethionema arabicum HOM05D005494 ORTHO05D006689 3.6e-93 345.9 338 52.1
HPP92_008786 Vanilla planifolia HOM05D005494 ORTHO05D006689 2.5e-91 339.7 349 51.3
Zm00001eb121920 Zea mays HOM05D005494 ORTHO05D006689 3.7e-90 335.9 342 51.8
Lalb_Chr07g0182421 Lupinus albus HOM05D005494 ORTHO05D006689 1.1e-89 334.3 255 67.1
Os01g0184000 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 1.5e-88 330.5 347 50.4
BcaC04g19267 Brassica carinata HOM05D005494 ORTHO05D006689 7.7e-88 328.2 344 50.9
Oeu038311.1 Olea europaea HOM05D005494 ORTHO05D006689 3.4e-80 302.8 199 74.4
HPP92_006463 Vanilla planifolia HOM05D005494 ORTHO05D006689 3.4e-80 302.8 350 46.0
Os01g0354700 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 4.7e-77 292.4 348 42.8
FAN08G3169 Fragaria x ananassa HOM05D005494 ORTHO05D006689 9.4e-70 268.1 189 69.8
Pp3c4_400 Physcomitrium patens HOM05D005494 ORTHO05D006689 4.4e-67 259.2 363 39.7
Sc12g0005880 Simmondsia chinensis HOM05D005494 ORTHO05D006689 1.3e-66 257.7 248 55.2
Mapoly0002s0051 Marchantia polymorpha HOM05D005494 ORTHO05D006689 4.8e-66 255.8 360 40.6
GSVIVG01008100001 Vitis vinifera HOM05D005494 ORTHO05D006689 5.5e-62 242.3 164 72.0
Duzib205G0238 Durio zibethinus HOM05D005494 ORTHO05D006689 6.8e-60 235.3 205 60.0
CDE02G1640 Ceratophyllum demersum HOM05D005494 ORTHO05D006689 1.1e-57 228.0 203 58.6
Sc12g0005890 Simmondsia chinensis HOM05D005494 ORTHO05D006689 2.5e-54 216.9 176 62.5
Glyma.19G005300 Glycine max HOM05D005494 ORTHO05D006689 8.9e-52 208.4 136 73.5
AagrBONN_evm.TU.Sc2ySwM_344.720 Anthoceros agrestis HOM05D005494 ORTHO05D006689 1.5e-43 181.0 289 38.1
Phvul.009G054101 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 3.4e-43 179.9 121 71.1
Glyma.06G187800 Glycine max HOM05D005494 ORTHO05D006689 1.6e-40 171.0 120 63.3
CBR_g8796 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-39 167.5 321 34.3
BolC9t59405H Brassica oleracea HOM05D005494 ORTHO05D006689 8.6e-39 165.2 150 54.7
Thhalv10015920m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 3.3e-38 163.3 276 41.3
Phvul.009G054050 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 1.6e-32 144.4 98 64.3
GSVIVG01008101001 Vitis vinifera HOM05D005494 ORTHO05D006689 2.3e-31 140.6 85 77.6
Lalb_Chr07g0182431 Lupinus albus HOM05D005494 ORTHO05D006689 1.2e-27 128.3 81 74.1
Atru.chr3.1308 Acer truncatum HOM05D005494 ORTHO05D006689 4.4e-27 126.3 84 69.0
SGA_v2.0_scaffold114G31872 Striga asiatica HOM05D005494 ORTHO05D006689 8.3e-26 122.1 93 64.5
PRCOL_00002205 Prasinoderma coloniale HOM05D005494 ORTHO05D006689 1.8e-20 104.4 300 31.3
VMungo1309G1734 Vigna mungo HOM05D005494 ORTHO05D006689 1.8e-20 104.4 87 63.2
BraA10t44725Z Brassica rapa HOM05D005494 ORTHO05D006689 5.2e-20 102.8 74 67.6
Cre03.g168350 Chlamydomonas reinhardtii HOM05D005494 ORTHO05D006689 9.9e-19 98.6 207 32.4
MBI06_g04707_MAGBIO Magnolia biondii HOM05D002360 ORTHO05D006689 2.1e-16 90.9 73 60.3
QL06p038666 Quercus lobata HOM05D000045 ORTHO05D009425 2.4e-09 67.4 81 42.0
Lj5A118T79 Lonicera japonica HOM05D005494 ORTHO05D006689 2.7e-08 63.9 43 72.1
Dinv32660 Davidia involucrata HOM05D005494 ORTHO05D006689 3.0e-07 60.5 32 84.4


User provided reference genes

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