Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 5.4e-216 754.2 424 100.0
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 5.2e-195 684.5 424 92.9
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 1.0e-153 547.4 416 76.4
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 2.9e-145 519.2 427 74.0
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 9.7e-141 504.2 414 71.5
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 1.2e-138 497.3 415 70.8
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.5e-80 304.3 437 49.0
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 4.3e-80 302.8 440 48.4
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 2.3e-78 297.0 430 47.7
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 5.2e-78 295.8 438 45.2
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 2.9e-76 290.0 427 43.3
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 4.9e-76 289.3 429 43.6
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 1.1e-70 271.6 414 47.3
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 1.7e-68 264.2 411 45.0
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 1.1e-67 261.5 370 43.2
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 1.2e-66 258.1 457 40.7
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 1.2e-66 258.1 448 41.5
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 5.1e-65 252.7 394 42.1
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 2.1e-63 247.3 390 44.4
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 8.1e-63 245.4 494 40.7
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 2.4e-62 243.8 322 44.7
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 9.0e-62 241.9 460 38.5
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 1.5e-61 241.1 424 39.6
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 1.5e-61 241.1 413 43.6
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 4.4e-61 239.6 437 41.0
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 1.3e-60 238.0 310 48.7
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 1.4e-59 234.6 436 42.4
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 2.7e-58 230.3 368 42.4
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 1.3e-57 228.0 422 42.4
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 2.3e-57 227.3 428 40.2
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 2.3e-57 227.3 291 47.4
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 3.3e-56 223.4 392 41.6
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 5.6e-56 222.6 332 43.4
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 7.3e-56 222.2 453 38.6
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 1.3e-55 221.5 332 43.1
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 2.8e-55 220.3 392 41.6
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 1.4e-54 218.0 385 41.0
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 5.3e-54 216.1 318 40.9
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 6.9e-54 215.7 412 39.8
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 1.2e-53 214.9 385 46.0
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 1.2e-53 214.9 482 34.4
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 4.5e-53 213.0 331 45.9
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 1.7e-52 211.1 307 43.0
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 3.8e-52 209.9 305 44.3
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 6.4e-52 209.1 310 45.2
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 6.4e-52 209.1 310 45.2
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 6.4e-52 209.1 339 36.3
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 8.4e-52 208.8 313 42.2
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 3.2e-51 206.8 423 42.6
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 3.2e-51 206.8 408 39.7
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 3.2e-51 206.8 523 32.5
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 7.1e-51 205.7 382 39.3
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 7.1e-51 205.7 232 47.8
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.6e-50 204.5 258 48.4
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 1.6e-50 204.5 258 46.5
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 2.1e-50 204.1 390 37.7
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 2.1e-50 204.1 418 38.5
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 2.1e-50 204.1 375 42.1
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 3.5e-50 203.4 328 41.5
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 7.9e-50 202.2 394 39.6
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 1.0e-49 201.8 455 36.7
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 1.0e-49 201.8 476 35.3
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 1.3e-49 201.4 403 35.7
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 2.3e-49 200.7 326 39.6
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 2.3e-49 200.7 328 42.4
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 3.0e-49 200.3 457 33.7
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 5.1e-49 199.5 431 33.4
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 6.7e-49 199.1 393 37.7
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 1.1e-48 198.4 412 36.9
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 1.5e-48 198.0 323 39.9
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 1.9e-48 197.6 416 34.9
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 2.8e-47 193.7 482 33.2
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 8.1e-47 192.2 517 34.0
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 8.1e-47 192.2 332 39.2
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 1.1e-46 191.8 341 41.9
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 1.8e-46 191.0 259 43.2
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 3.1e-46 190.3 420 35.2
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 9.0e-46 188.7 248 48.0
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 2.0e-45 187.6 424 35.4
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 3.4e-45 186.8 516 33.1
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 7.6e-45 185.7 167 52.7
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 7.6e-45 185.7 410 34.4
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 1.7e-44 184.5 423 34.8
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 2.9e-44 183.7 167 52.1
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 2.9e-44 183.7 166 52.4
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 3.8e-44 183.3 166 52.4
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 1.1e-43 181.8 394 34.5
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 1.4e-43 181.4 394 35.8
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 3.2e-43 180.3 243 41.2
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 4.2e-43 179.9 317 43.8
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 1.5e-40 171.4 199 54.3
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 1.6e-39 167.9 187 47.6
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 2.8e-39 167.2 289 41.2
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 2.8e-39 167.2 254 40.6
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 1.5e-37 161.4 487 30.8
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 2.0e-37 161.0 412 35.2
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 4.9e-36 156.4 338 35.2
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 1.2e-34 151.8 322 36.0
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 6.1e-34 149.4 184 42.4
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 6.7e-33 146.0 158 46.2
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 5.9e-29 132.9 256 34.0
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 2.2e-28 131.0 279 31.5
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 4.2e-27 126.7 257 36.6
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 7.9e-26 122.5 146 43.2
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 3.0e-25 120.6 145 44.8
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 5.1e-25 119.8 166 38.6
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 5.1e-25 119.8 260 31.2
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 9.1e-22 109.0 234 31.6
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 3.8e-20 103.6 169 35.5
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 6.5e-20 102.8 135 46.7
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 5.7e-16 89.7 66 63.6
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 3.8e-12 77.0 157 45.2
CsaV3_5G025680 Cucumis sativus L. HOM05D006873 ORTHO05D008668 8.5e-12 75.9 121 37.2
CsaV3_5G025690 Cucumis sativus L. HOM05D006873 ORTHO05D008668 3.2e-11 73.9 116 39.7


User provided reference genes

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