Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.8e-38 162.5 112 100.0
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.8e-38 162.5 112 100.0
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 1.7e-36 156.0 112 82.1
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 1.1e-35 153.3 111 94.6
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 2.5e-35 152.1 112 93.8
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 1.0e-33 146.7 112 83.9
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 8.8e-33 143.7 111 91.0
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 1.1e-32 143.3 112 70.5
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.1e-32 143.3 112 73.2
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 5.7e-32 141.0 108 81.5
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 9.7e-32 140.2 112 83.9
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.3e-31 139.8 112 82.1
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 1.7e-31 139.4 112 83.0
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.8e-31 138.7 112 81.2
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 4.8e-31 137.9 112 75.0
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 4.8e-31 137.9 108 80.6
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 4.8e-31 137.9 112 84.8
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 6.3e-31 137.5 111 82.0
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.1e-30 136.7 109 67.0
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 82.1
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 79.5
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 81.2
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 81.2
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 1.4e-30 136.3 109 72.5
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.8e-30 136.0 111 81.1
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 2.4e-30 135.6 112 83.0
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 3.1e-30 135.2 113 73.5
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.1e-30 134.8 112 82.1
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 5.3e-30 134.4 112 80.4
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 9.1e-30 133.7 112 65.2
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 9.1e-30 133.7 112 72.3
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 1.5e-29 132.9 111 82.9
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 1.5e-29 132.9 112 81.2
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.6e-29 132.1 116 77.6
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 3.4e-29 131.7 110 80.9
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 3.4e-29 131.7 112 77.7
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 3.4e-29 131.7 111 58.6
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.5e-29 131.3 111 81.1
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 5.9e-29 131.0 111 76.6
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 7.7e-29 130.6 109 81.7
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 7.7e-29 130.6 111 76.6
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.7e-28 129.4 110 65.5
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 1.7e-28 129.4 112 80.4
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.7e-28 129.4 110 79.1
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 1.7e-28 129.4 110 79.1
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.7e-28 129.4 109 80.7
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 2.2e-28 129.0 110 78.2
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 2.2e-28 129.0 113 77.0
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 2.2e-28 129.0 112 76.8
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 2.2e-28 129.0 112 61.6
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 2.2e-28 129.0 114 79.8
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 2.9e-28 128.6 112 79.5
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.9e-28 128.6 112 74.1
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 2.9e-28 128.6 112 77.7
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 2.9e-28 128.6 112 76.8
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 3.8e-28 128.3 111 83.8
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 3.8e-28 128.3 112 60.7
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 6.5e-28 127.5 113 78.8
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 6.5e-28 127.5 112 60.7
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 8.5e-28 127.1 111 75.7
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 1.4e-27 126.3 112 72.3
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 4.2e-27 124.8 112 80.4
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 4.2e-27 124.8 111 61.3
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 7.2e-27 124.0 110 80.0
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 9.4e-27 123.6 114 78.9
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 9.4e-27 123.6 114 78.9
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 1.2e-26 123.2 113 75.2
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 3.6e-26 121.7 107 68.2
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 1.4e-25 119.8 112 71.4
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 1.8e-25 119.4 109 77.1
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 1.8e-25 119.4 108 55.6
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 3.9e-25 118.2 108 73.1
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 3.9e-25 118.2 111 55.9
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 6.7e-25 117.5 113 76.1
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 1.5e-24 116.3 115 71.3
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.6e-24 115.5 108 68.5
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 2.8e-23 112.1 112 76.8
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 1.1e-22 110.2 86 90.7
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 2.4e-22 109.0 123 67.5
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.4e-22 109.0 108 53.7
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 4.1e-22 108.2 111 73.9
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 9.1e-22 107.1 115 64.3
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 3.5e-21 105.1 113 53.1
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 2.9e-20 102.1 112 52.7
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 3.8e-20 101.7 108 69.4
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 1.9e-19 99.4 110 69.1
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.9e-19 99.4 94 58.5
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 3.2e-19 98.6 116 69.8
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 3.2e-19 98.6 109 69.7
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 5.5e-19 97.8 110 52.7
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 9.4e-19 97.1 116 69.0
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 2.7e-18 95.5 113 46.0
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 3.6e-18 95.1 115 70.4
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 3.6e-18 95.1 82 62.2
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 1.0e-17 93.6 108 60.2
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.4e-17 93.2 83 77.1
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 1.4e-17 93.2 88 79.5
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 2.3e-17 92.4 114 67.5
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 2.3e-17 92.4 114 67.5
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 5.2e-17 91.3 206 35.0
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 6.7e-17 90.9 87 64.4
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 6.7e-17 90.9 101 75.2
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 1.5e-16 89.7 48 91.7
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 2.0e-16 89.4 112 67.9
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 3.3e-16 88.6 83 71.1
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 3.3e-16 88.6 88 55.7
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 3.3e-16 88.6 48 91.7
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 4.4e-16 88.2 115 67.0
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 4.4e-16 88.2 47 91.5
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 7.5e-16 87.4 87 78.2
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 1.3e-15 86.7 88 77.3
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 1.7e-15 86.3 106 50.0
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 2.8e-15 85.5 45 91.1
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 4.8e-15 84.7 108 54.6
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 1.1e-14 83.6 111 65.8
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 1.4e-14 83.2 83 79.5
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.8e-14 82.8 45 91.1
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 9.1e-14 80.5 113 45.1
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 1.2e-13 80.1 47 80.9
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.0e-12 77.0 82 48.8
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 1.3e-12 76.6 112 63.4
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 1.5e-11 73.2 73 54.8
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 1.2e-10 70.1 117 54.7
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 1.2e-10 70.1 104 63.5
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 2.7e-10 68.9 87 69.0
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 3.6e-10 68.6 88 43.2
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 6.1e-10 67.8 84 44.0
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.0e-09 67.0 89 47.2
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 2.0e-08 62.8 89 68.5
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 4.4e-08 61.6 82 62.2
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 1.4e-06 56.6 32 84.4
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 3.1e-06 55.5 93 34.4
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 5.4e-06 54.7 60 50.0


User provided reference genes

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