Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 0.0e+00 1211.4 620 100.0
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 3.6e-269 931.4 672 76.3
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 7.5e-259 897.1 624 78.8
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 1.6e-256 889.4 678 74.0
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 1.5e-251 872.8 678 73.0
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 2.9e-250 868.6 678 71.1
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 3.2e-249 865.1 678 72.4
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 4.3e-246 854.7 678 70.6
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 2.1e-184 649.8 685 55.3
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 3.4e-179 632.5 684 52.5
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 3.6e-176 622.5 684 53.4
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 4.8e-173 612.1 669 52.6
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 4.8e-173 612.1 705 51.8
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 4.8e-165 585.5 683 50.1
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 1.3e-162 577.4 687 49.9
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 1.7e-162 577.0 683 50.5
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 6.5e-162 575.1 684 49.4
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 8.5e-162 574.7 684 50.0
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 5.5e-161 572.0 673 49.6
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 6.8e-159 565.1 642 50.8
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 6.8e-159 565.1 673 49.6
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 4.4e-158 562.4 681 49.0
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 9.8e-158 561.2 671 48.9
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 1.7e-157 560.5 682 48.4
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 8.3e-157 558.1 671 48.6
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 3.1e-156 556.2 684 48.0
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 8.5e-154 548.1 627 50.9
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 1.1e-153 547.7 671 47.5
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 1.5e-153 547.4 674 48.4
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 4.7e-152 542.3 670 47.8
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 2.2e-149 533.5 507 59.2
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.6e-147 527.3 670 47.3
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 1.6e-147 527.3 560 53.9
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 2.7e-147 526.6 674 46.3
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 5.0e-146 522.3 630 48.6
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 6.6e-146 521.9 679 45.7
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 1.5e-145 520.8 679 47.1
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.5e-145 520.0 681 46.8
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 4.3e-145 519.2 680 46.8
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 9.5e-145 518.1 681 46.7
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 2.1e-144 516.9 679 46.8
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 8.0e-144 515.0 563 51.3
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 1.4e-143 514.2 634 47.5
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 2.9e-141 506.5 640 46.7
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 4.9e-141 505.8 675 46.4
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 1.4e-140 504.2 704 43.9
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 1.8e-140 503.8 684 44.4
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 1.8e-140 503.8 682 44.1
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 4.1e-140 502.7 682 45.9
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 1.6e-139 500.7 681 46.5
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 5.9e-139 498.8 671 45.3
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 3.0e-138 496.5 674 45.0
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 8.6e-138 495.0 666 44.7
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.8e-136 490.0 621 50.7
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.4e-135 487.6 678 44.4
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.3e-135 486.9 677 44.3
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 3.1e-135 486.5 659 45.8
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 5.2e-135 485.7 681 44.2
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 1.5e-134 484.2 615 47.0
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 4.4e-134 482.6 665 44.2
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 8.3e-133 478.4 440 57.3
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 8.3e-133 478.4 666 43.7
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 3.2e-132 476.5 633 46.1
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 1.2e-131 474.6 677 43.0
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.0e-131 473.8 615 46.7
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 3.5e-131 473.0 664 42.0
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 4.6e-131 472.6 670 43.3
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.3e-130 471.1 615 46.2
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 2.3e-130 470.3 632 45.4
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.0e-130 469.2 666 44.1
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 2.5e-129 466.8 696 42.5
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 2.5e-129 466.8 645 42.5
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 2.5e-129 466.8 643 42.5
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 5.6e-129 465.7 665 43.0
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 1.6e-128 464.2 679 41.1
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 1.6e-128 464.2 631 42.9
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 3.6e-128 463.0 681 42.9
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 6.2e-128 462.2 665 42.4
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 2.3e-127 460.3 666 42.5
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 5.2e-127 459.1 691 42.7
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 5.8e-126 455.7 685 42.0
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 9.8e-126 454.9 632 42.6
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 8.3e-125 451.8 571 51.1
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 1.9e-124 450.7 666 41.6
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 5.4e-124 449.1 623 44.8
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 3.0e-122 443.4 663 40.6
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 3.0e-122 443.4 661 41.1
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 3.9e-122 443.0 670 41.8
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 8.6e-122 441.8 664 41.9
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 5.6e-121 439.1 663 42.1
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 1.2e-120 438.0 665 41.7
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 1.2e-120 438.0 665 42.0
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 1.6e-120 437.6 665 41.7
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 2.9e-117 426.8 674 38.9
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 6.4e-117 425.6 662 40.8
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 2.1e-112 410.6 630 41.4
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 8.7e-106 388.7 679 37.4
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 2.5e-105 387.1 630 39.5
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 3.6e-104 383.3 587 41.7
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 9.9e-102 375.2 583 41.2
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 2.1e-96 357.5 631 38.4
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 6.7e-82 309.3 497 41.9
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 2.6e-78 297.4 325 48.9
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 8.5e-69 265.8 242 57.0
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 2.0e-57 228.0 612 28.8
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 2.2e-56 224.6 357 42.6
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 3.1e-55 220.7 588 27.9
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 1.9e-52 211.5 631 29.0
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 7.5e-49 199.5 483 32.3
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 7.2e-44 183.0 358 34.9
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 2.1e-35 154.8 293 36.9
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 3.8e-29 134.0 591 26.6
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 1.4e-26 125.6 502 27.3
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.2e-25 122.5 167 43.7
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 7.5e-25 119.8 111 55.9
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 7.5e-25 119.8 647 23.2
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 8.3e-24 116.3 163 47.2
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.9e-20 105.1 144 43.8
PRCOL_00005763 Prasinoderma coloniale HOM05D005942 ORTHO05D007209 1.8e-18 98.6 412 25.5
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 3.0e-13 81.3 411 24.3
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 9.5e-12 76.3 165 32.7
MBI15_g00935_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D016670 2.3e-10 71.6 80 52.5
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 1.5e-09 68.9 68 55.9
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 3.7e-08 64.3 80 46.2
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 4.9e-08 63.9 73 45.2
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 3.2e-07 61.2 66 47.0
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 5.4e-07 60.5 170 30.0


User provided reference genes

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