Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006268g0010 Nicotiana tabacum HOM05D006756 ORTHO05D001869 0.0e+00 1472.2 840 100.0
Sopen07g004070 Solanum pennellii HOM05D006756 ORTHO05D001869 1.7e-293 1012.7 855 67.1
Nitab4.5_0000028g0240 Nicotiana tabacum HOM05D006756 ORTHO05D001869 1.9e-289 999.2 802 75.2
Solyc07g008190.4 Solanum lycopersicum HOM05D006756 ORTHO05D001869 8.0e-288 993.8 855 66.9
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 4.8e-277 958.0 854 63.9
CAN.G573.9 Capsicum annuum HOM05D006756 ORTHO05D001869 3.6e-272 941.8 853 66.2
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 1.1e-122 445.3 865 39.4
CSS0003155 Camellia sinensis var. sinensis HOM05D006756 ORTHO05D001869 3.8e-112 410.2 856 37.6
Cc06_g08320 Coffea canephora HOM05D006756 ORTHO05D001869 2.7e-102 377.5 863 34.8
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 6.7e-101 372.9 886 36.7
GSVIVG01015553001 Vitis vinifera HOM05D006756 ORTHO05D001869 7.4e-100 369.4 872 35.9
Ciclev10007561m.g Citrus clementina HOM05D006756 ORTHO05D001869 3.8e-96 357.1 864 35.0
Oeu058044.1 Olea europaea HOM05D006756 ORTHO05D001869 3.8e-96 357.1 872 38.1
Atru.chr7.1133 Acer truncatum HOM05D006756 ORTHO05D001869 4.9e-96 356.7 861 34.7
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 9.6e-92 342.4 831 35.4
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 4.1e-90 337.0 871 34.6
Manes.14G133500 Manihot esculenta HOM05D006756 ORTHO05D001869 2.5e-87 327.8 858 32.6
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 5.5e-87 326.6 915 33.1
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 1.5e-84 318.5 839 34.8
Potri.018G129900 Populus trichocarpa HOM05D006756 ORTHO05D001869 9.7e-84 315.8 848 37.4
Gohir.D06G054000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 4.8e-83 313.5 858 33.4
Prupe.7G245100 Prunus persica HOM05D006756 ORTHO05D001869 8.2e-83 312.8 858 32.2
vmacro20571 Vaccinium macrocarpon HOM05D006756 ORTHO05D001869 2.6e-81 307.8 843 34.3
TWI34G1307 Tripterygium wilfordii HOM05D006756 ORTHO05D001869 5.9e-81 306.6 860 32.2
Glyma.04G146900 Glycine max HOM05D006756 ORTHO05D001869 7.7e-81 306.2 851 33.4
Gorai.010G063000 Gossypium raimondii HOM05D006756 ORTHO05D001869 1.0e-80 305.8 858 32.3
QL02p088845 Quercus lobata HOM05D006756 ORTHO05D001869 2.2e-80 304.7 849 31.7
Gohir.A06G055000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 2.9e-80 304.3 855 32.5
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 5.0e-80 303.5 848 32.9
Lalb_Chr11g0072181 Lupinus albus HOM05D006756 ORTHO05D001869 1.1e-79 302.4 837 32.4
Sabra18G0110400 Salix brachista HOM05D006756 ORTHO05D001869 1.1e-79 302.4 863 35.1
Rhsim01G0068000 Rhododendron simsii HOM05D006756 ORTHO05D001869 2.5e-79 301.2 911 32.1
Duzib168G2156 Durio zibethinus HOM05D006756 ORTHO05D001869 1.2e-78 298.9 854 33.1
DCAR_017806 Daucus carota HOM05D006756 ORTHO05D001869 2.1e-78 298.1 852 33.6
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 2.6e-76 291.2 845 31.8
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 1.3e-75 288.9 860 31.5
FvH4_1g03050 Fragaria vesca HOM05D006756 ORTHO05D001869 1.8e-74 285.0 863 32.2
Lsat_1_v5_gn_8_58441 Lactuca sativa HOM05D006756 ORTHO05D001869 1.8e-74 285.0 860 32.1
MELO3C010331.2 Cucumis melo HOM05D006756 ORTHO05D001869 6.9e-74 283.1 851 31.5
RcHm_v2.0_Chr2g0088181 Rosa chinensis HOM05D006756 ORTHO05D001869 2.6e-73 281.2 853 32.1
CsaV3_1G030330 Cucumis sativus L. HOM05D006756 ORTHO05D001869 5.9e-73 280.0 856 31.9
ECA236G0350 Erigeron canadensis HOM05D006756 ORTHO05D001869 2.5e-71 274.6 872 31.9
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 3.2e-71 274.2 833 31.8
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 1.6e-70 271.9 896 31.0
Nn2g12064 Nelumbo nucifera HOM05D006756 ORTHO05D001869 3.9e-69 267.3 865 31.0
Medtr2g072590 Medicago truncatula HOM05D006756 ORTHO05D001869 5.2e-69 266.9 846 31.4
Migut.K00444 Erythranthe guttata HOM05D006756 ORTHO05D001869 1.5e-68 265.4 678 35.0
Medtr7g033910 Medicago truncatula HOM05D006756 ORTHO05D001869 8.2e-67 259.6 836 31.5
SGA_v2.0_scaffold464G52008 Striga asiatica HOM05D006756 ORTHO05D001869 2.4e-66 258.1 671 34.6
ClCG06G011280 Citrullus lanatus HOM05D006756 ORTHO05D001869 4.1e-66 257.3 849 29.3
Psat1g024440 Pisum sativum HOM05D006756 ORTHO05D001869 4.1e-66 257.3 858 31.0
Thecc.09G128500 Theobroma cacao HOM05D006756 ORTHO05D001869 1.2e-65 255.8 668 33.2
Eucgr.C01517 Eucalyptus grandis HOM05D006756 ORTHO05D001869 7.7e-65 253.1 856 31.1
Lj1g0024911 Lotus japonicus HOM05D006756 ORTHO05D001869 1.7e-64 251.9 855 30.4
Phvul.009G207200 Phaseolus vulgaris HOM05D006756 ORTHO05D001869 1.2e-62 245.7 796 31.0
Ca_02761_v3 Cicer arietinum L. HOM05D006756 ORTHO05D001869 2.7e-62 244.6 845 30.4
FAN23G1563 Fragaria x ananassa HOM05D006756 ORTHO05D001869 8.0e-62 243.0 866 31.6
Sed0004031 Sechium edule HOM05D006756 ORTHO05D001869 1.4e-61 242.3 845 29.7
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 3.0e-61 241.1 846 30.0
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 3.3e-60 237.7 680 32.5
PSO170G5384 Papaver somniferum HOM05D006756 ORTHO05D001869 4.4e-60 237.3 855 30.9
Cfa003391 Carpinus fangiana HOM05D006756 ORTHO05D001869 3.7e-59 234.2 758 30.1
PGR142G2180 Punica granatum HOM05D006756 ORTHO05D001869 8.2e-59 233.0 858 30.9
SalBow1G7291 Salvia bowleyana HOM05D006756 ORTHO05D001869 1.1e-58 232.6 703 32.1
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 5.3e-58 230.3 669 31.5
TPR.G9536 Trifolium pratense HOM05D006756 ORTHO05D001869 7.7e-57 226.5 827 29.6
FAN26G0517 Fragaria x ananassa HOM05D006756 ORTHO05D001869 9.4e-55 219.5 856 29.6
FAN28G3026 Fragaria x ananassa HOM05D006756 ORTHO05D001869 4.0e-53 214.2 867 29.6
PSO017G1657 Papaver somniferum HOM05D006756 ORTHO05D001869 2.6e-52 211.5 873 29.7
arahy.Tifrunner.gnm1.ann1.BW9NFB Arachis hypogaea HOM05D006756 ORTHO05D001869 4.4e-52 210.7 672 30.7
THA.LOC104811027 Tarenaya hassleriana HOM05D006756 ORTHO05D001869 3.7e-51 207.6 859 28.6
Duzib150G0144 Durio zibethinus HOM05D006756 ORTHO05D001869 6.3e-51 206.8 657 30.0
Sc18g0000500 Simmondsia chinensis HOM05D006756 ORTHO05D001869 6.3e-51 206.8 573 32.1
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 4.5e-49 200.7 863 29.2
Ah.09g225260 Amaranthus hybridus HOM05D006756 ORTHO05D001869 5.0e-48 197.2 831 29.2
Haze_25558 Corylus avellana HOM05D006756 ORTHO05D001869 2.5e-47 194.9 859 26.5
PSO170G5619 Papaver somniferum HOM05D006756 ORTHO05D001869 3.2e-47 194.5 560 32.9
Sed0021917 Sechium edule HOM05D006756 ORTHO05D001869 3.2e-47 194.5 782 27.5
BcaC03g13743 Brassica carinata HOM05D006756 ORTHO05D001869 3.6e-46 191.0 885 29.0
unitig_748.g7157 Utricularia gibba HOM05D006756 ORTHO05D001869 3.6e-46 191.0 683 30.3
Thhalv10012771m.g Eutrema salsugineum HOM05D006756 ORTHO05D001869 3.0e-45 188.0 861 28.5
Sp6g24200 Schrenkiella parvula HOM05D006756 ORTHO05D001869 2.6e-44 184.9 856 28.5
CARHR192620 Cardamine hirsuta HOM05D006756 ORTHO05D001869 4.4e-44 184.1 865 27.9
BcaB05g22863 Brassica carinata HOM05D006756 ORTHO05D001869 7.5e-44 183.3 862 26.5
Glyma.06G217700 Glycine max HOM05D006756 ORTHO05D001869 3.7e-43 181.0 443 34.1
AL6G31760 Arabidopsis lyrata HOM05D006756 ORTHO05D001869 4.9e-43 180.6 871 27.6
EL10Ac8g18682 Beta vulgaris HOM05D006756 ORTHO05D001869 1.8e-42 178.7 834 27.8
Aa31LG1G14420 Aethionema arabicum HOM05D006756 ORTHO05D001869 2.0e-41 175.3 882 28.3
AT5G20200 Arabidopsis thaliana HOM05D006756 ORTHO05D001869 3.5e-41 174.5 867 27.7
Carub.0006s1860 Capsella rubella HOM05D006756 ORTHO05D001869 1.0e-40 172.9 861 27.5
Aqoxy7G02256 Aquilegia oxysepala HOM05D006756 ORTHO05D001869 1.7e-40 172.2 590 29.0
HanXRQChr05g0140241 Helianthus annuus HOM05D006756 ORTHO05D001869 6.6e-40 170.2 505 33.7
BraA10t44048Z Brassica rapa HOM05D006756 ORTHO05D001869 1.9e-39 168.7 870 27.0
BcaC04g19408 Brassica carinata HOM05D006756 ORTHO05D001869 1.8e-37 162.2 859 27.0
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 3.0e-37 161.4 866 27.7
BcaB08g36540 Brassica carinata HOM05D006756 ORTHO05D001869 5.2e-37 160.6 869 28.5
AUR62011148 Chenopodium quinoa HOM05D006756 ORTHO05D001869 5.7e-36 157.1 848 27.6
AUR62013339 Chenopodium quinoa HOM05D006756 ORTHO05D001869 2.4e-34 151.8 851 27.3
COL.COLO4_35103 Corchorus olitorius HOM05D006756 ORTHO05D001869 4.7e-30 137.5 314 36.3
Actinidia40482 Actinidia chinensis HOM05D006756 ORTHO05D001869 1.1e-26 126.3 145 51.0
PSO017G1072 Papaver somniferum HOM05D006756 ORTHO05D001869 2.0e-25 122.1 552 28.6
Glyma.06G217600 Glycine max HOM05D006756 ORTHO05D001869 4.0e-21 107.8 322 31.4
HanXRQChr05g0140231 Helianthus annuus HOM05D006756 ORTHO05D001869 8.3e-19 100.1 116 48.3
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.9e-18 99.0 528 27.3
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 2.1e-17 95.5 583 26.8
Dinv41496 Davidia involucrata HOM05D006756 ORTHO05D001869 2.7e-17 95.1 436 27.5
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 2.7e-17 95.1 845 24.0
Gohir.D05G016600 Gossypium hirsutum HOM05D006756 ORTHO05D001869 1.6e-14 85.9 524 26.1
ATR1120G177 Amborella trichopoda HOM05D006756 ORTHO05D001869 6.2e-14 84.0 265 33.2
AL3G22120 Arabidopsis lyrata HOM05D003044 ORTHO05D001869 6.2e-14 84.0 573 24.6
Duzib187G1404 Durio zibethinus HOM05D006756 ORTHO05D001869 6.2e-14 84.0 119 45.4
Nn2g14384 Nelumbo nucifera HOM05D003044 ORTHO05D001869 6.2e-14 84.0 560 25.0
Aa31LG3G3500 Aethionema arabicum HOM05D003044 ORTHO05D001869 8.1e-14 83.6 555 25.8
Duzib114G0797 Durio zibethinus HOM05D003044 ORTHO05D001869 1.8e-13 82.4 542 25.6
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 2.4e-13 82.0 871 25.5
Cfa003390 Carpinus fangiana HOM05D006756 ORTHO05D001869 5.2e-13 80.9 76 56.6
COL.COLO4_35105 Corchorus olitorius HOM05D006756 ORTHO05D001869 5.2e-13 80.9 263 30.4
THA.LOC104816476 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 8.9e-13 80.1 540 24.3
Carub.0003s0988 Capsella rubella HOM05D003044 ORTHO05D001869 1.2e-12 79.7 461 25.4
Manes.10G059500 Manihot esculenta HOM05D003044 ORTHO05D001869 2.0e-12 79.0 545 26.4
MD02G1257800 Malus domestica HOM05D003044 ORTHO05D001869 2.6e-12 78.6 587 26.2
Duzib128G0650 Durio zibethinus HOM05D003044 ORTHO05D001869 3.4e-12 78.2 556 25.7
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 3.4e-12 78.2 492 25.0
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 4.4e-12 77.8 859 23.2
Thhalv10019905m.g Eutrema salsugineum HOM05D003044 ORTHO05D001869 1.3e-11 76.3 541 24.0
Prupe.2G074800 Prunus persica HOM05D003044 ORTHO05D001869 1.7e-11 75.9 593 26.0
AT3G10650 Arabidopsis thaliana HOM05D003044 ORTHO05D001869 2.2e-11 75.5 610 24.1
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 2.2e-11 75.5 676 24.3
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 2.9e-11 75.1 880 23.9
Sp3g08960 Schrenkiella parvula HOM05D003044 ORTHO05D001869 2.9e-11 75.1 643 24.3
CARHR085230 Cardamine hirsuta HOM05D003044 ORTHO05D001869 4.9e-11 74.3 473 25.4
TAR633G1492 Trochodendron aralioides HOM05D003044 ORTHO05D001869 6.4e-11 73.9 870 23.0
CDE04G3330 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 3.2e-10 71.6 868 23.7
CSS0000792 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 5.4e-10 70.9 571 24.3
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 7.1e-10 70.5 867 22.7
Ciclev10014057m.g Citrus clementina HOM05D003044 ORTHO05D001869 1.2e-09 69.7 865 24.6
Medtr1g090340 Medicago truncatula HOM05D003044 ORTHO05D001869 1.6e-09 69.3 570 22.6
Cfa010501 Carpinus fangiana HOM05D003044 ORTHO05D001869 4.6e-09 67.8 844 22.6
PSO384G0573 Papaver somniferum HOM05D003044 ORTHO05D001869 4.6e-09 67.8 804 22.6
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 7.8e-09 67.0 688 24.7
RcHm_v2.0_Chr1g0332241 Rosa chinensis HOM05D003044 ORTHO05D001869 1.3e-08 66.2 668 23.5
THA.LOC104823155 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 1.3e-08 66.2 623 22.3
A01p41560 Brassica napus HOM05D003044 ORTHO05D001869 1.7e-08 65.9 78 48.7
MELO3C019915.2 Cucumis melo HOM05D003044 ORTHO05D001869 1.7e-08 65.9 833 23.3
HPP92_026330 Vanilla planifolia HOM05D003044 ORTHO05D001869 1.7e-08 65.9 212 29.7
AUR62042206 Chenopodium quinoa HOM05D003044 ORTHO05D001869 2.3e-08 65.5 876 22.8
TAR636G1345 Trochodendron aralioides HOM05D003044 ORTHO05D001869 2.3e-08 65.5 865 23.8
Gohir.A05G015501 Gossypium hirsutum HOM05D006756 ORTHO05D001869 3.0e-08 65.1 65 52.3
GSVIVG01034600001 Vitis vinifera HOM05D003044 ORTHO05D001869 3.0e-08 65.1 72 45.8
Ca_10372_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 6.6e-08 63.9 562 24.9
Eucgr.J00304 Eucalyptus grandis HOM05D003044 ORTHO05D001869 6.6e-08 63.9 853 22.3
Solyc11g006390.2 Solanum lycopersicum HOM05D003044 ORTHO05D001869 1.1e-07 63.2 546 25.6
BolC1t05369H Brassica oleracea HOM05D003044 ORTHO05D001869 1.9e-07 62.4 92 40.2
BraA01t04231Z Brassica rapa HOM05D003044 ORTHO05D001869 1.9e-07 62.4 81 44.4
COL.COLO4_32784 Corchorus olitorius HOM05D003044 ORTHO05D001869 1.9e-07 62.4 71 49.3
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 2.5e-07 62.0 552 25.7
PSO339G5639 Papaver somniferum HOM05D003044 ORTHO05D001869 2.5e-07 62.0 857 23.2
Sabra10G0191200 Salix brachista HOM05D003044 ORTHO05D001869 2.5e-07 62.0 678 23.7
A03p36670 Brassica napus HOM05D003044 ORTHO05D001869 3.3e-07 61.6 74 44.6
BraA03t12831Z Brassica rapa HOM05D003044 ORTHO05D001869 3.3e-07 61.6 74 44.6
Sopen11g002290 Solanum pennellii HOM05D003044 ORTHO05D001869 3.3e-07 61.6 546 25.6
C03p44310 Brassica napus HOM05D003044 ORTHO05D001869 4.3e-07 61.2 73 45.2
BolC3t16701H Brassica oleracea HOM05D003044 ORTHO05D001869 4.3e-07 61.2 73 45.2
PGR044G1498 Punica granatum HOM05D003044 ORTHO05D001869 7.3e-07 60.5 70 42.9
Ca_18140_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.2e-06 59.7 605 23.8
DCAR_018987 Daucus carota HOM05D003044 ORTHO05D001869 1.2e-06 59.7 668 23.1
Gorai.009G016800 Gossypium raimondii HOM05D006756 ORTHO05D001869 1.2e-06 59.7 112 40.2
MBI05_g36784_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 1.2e-06 59.7 876 23.4
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 1.2e-06 59.7 569 24.1
HPP92_018630 Vanilla planifolia HOM05D003044 ORTHO05D001869 1.6e-06 59.3 75 45.3
Actinidia34738 Actinidia chinensis HOM05D003044 ORTHO05D001869 2.1e-06 58.9 158 32.3
CiPaw.14G036200 Carya illinoinensis HOM05D003044 ORTHO05D001869 2.1e-06 58.9 898 24.1
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 2.1e-06 58.9 131 33.6
Sed0010208 Sechium edule HOM05D003044 ORTHO05D001869 2.1e-06 58.9 57 50.9
Ah.09g225250 Amaranthus hybridus HOM05D006756 ORTHO05D001869 2.8e-06 58.5 239 27.6
TPR.G13387 Trifolium pratense HOM05D003044 ORTHO05D001869 3.6e-06 58.2 62 48.4
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 4.7e-06 57.8 130 35.4
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 4.7e-06 57.8 130 35.4
Potri.008G014800 Populus trichocarpa HOM05D003044 ORTHO05D001869 4.7e-06 57.8 71 46.5
Ca_10422_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 6.2e-06 57.4 62 46.8
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 6.2e-06 57.4 130 35.4
Ah.14g085720 Amaranthus hybridus HOM05D003044 ORTHO05D001869 8.1e-06 57.0 74 45.9
Gorai.012G022400 Gossypium raimondii HOM05D003044 ORTHO05D001869 8.1e-06 57.0 68 50.0


User provided reference genes

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