Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006212g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 3.3e-273 944.5 505 100.0
Nitab4.5_0010437g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 1.4e-183 646.7 1131 41.5
Sopen02g008440 Solanum pennellii HOM05D005064 ORTHO05D006611 8.6e-120 434.9 292 78.4
Solyc02g050210.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 9.5e-119 431.4 292 78.1
CAN.G989.4 Capsicum annuum HOM05D005064 ORTHO05D006611 1.0e-117 427.9 275 80.4
Peaxi162Scf00744g00354 Petunia axillaris HOM05D005064 ORTHO05D006611 1.5e-116 424.1 268 81.3
Nitab4.5_0001246g0050 Nicotiana tabacum HOM05D005064 ORTHO05D006611 5.1e-104 382.5 286 72.7
CSS0042379 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 9.6e-95 351.7 335 57.3
GSVIVG01030280001 Vitis vinifera HOM05D005064 ORTHO05D006611 2.8e-94 350.1 299 62.9
Dinv35394 Davidia involucrata HOM05D005064 ORTHO05D006611 6.2e-94 349.0 278 64.4
Lj2C68T2 Lonicera japonica HOM05D005064 ORTHO05D006611 4.0e-93 346.3 293 60.4
QL07p034075 Quercus lobata HOM05D005064 ORTHO05D006611 6.4e-91 339.0 286 60.5
Ciclev10013403m.g Citrus clementina HOM05D005064 ORTHO05D006611 7.1e-90 335.5 293 58.7
Atru.chr8.2328 Acer truncatum HOM05D005064 ORTHO05D006611 9.3e-90 335.1 292 59.2
Manes.09G111200 Manihot esculenta HOM05D005064 ORTHO05D006611 4.6e-89 332.8 293 60.1
Thecc.05G007600 Theobroma cacao HOM05D005064 ORTHO05D006611 4.6e-89 332.8 286 60.5
Duzib093G0745 Durio zibethinus HOM05D005064 ORTHO05D006611 7.8e-89 332.0 286 59.1
TAR633G1737 Trochodendron aralioides HOM05D005064 ORTHO05D006611 2.5e-87 327.0 281 60.9
Haze_21075 Corylus avellana HOM05D005064 ORTHO05D006611 3.3e-87 326.6 288 59.4
HanXRQChr15g0486851 Helianthus annuus HOM05D005064 ORTHO05D006611 2.8e-86 323.6 294 55.1
Gohir.A04G095400 Gossypium hirsutum HOM05D005064 ORTHO05D006611 8.1e-86 322.0 286 59.4
Gorai.012G119100 Gossypium raimondii HOM05D005064 ORTHO05D006611 1.1e-85 321.6 286 60.1
CiPaw.09G214500 Carya illinoinensis HOM05D005064 ORTHO05D006611 1.4e-85 321.2 293 57.3
Gohir.D04G135300 Gossypium hirsutum HOM05D005064 ORTHO05D006611 1.8e-85 320.9 286 59.8
Potri.014G189600 Populus trichocarpa HOM05D005064 ORTHO05D006611 4.0e-85 319.7 294 57.8
COL.COLO4_14461 Corchorus olitorius HOM05D005064 ORTHO05D006611 1.2e-84 318.2 271 59.0
Sed0013669 Sechium edule HOM05D005064 ORTHO05D006611 1.2e-84 318.2 293 56.7
Nn2g11003 Nelumbo nucifera HOM05D005064 ORTHO05D006611 7.6e-84 315.5 294 57.5
ClCG10G022430 Citrullus lanatus HOM05D005064 ORTHO05D006611 9.9e-84 315.1 293 56.0
Migut.J00101 Erythranthe guttata HOM05D005064 ORTHO05D006611 2.2e-83 313.9 349 48.1
MELO3C009135.2 Cucumis melo HOM05D005064 ORTHO05D006611 2.4e-82 310.5 293 54.9
Prupe.4G287200 Prunus persica HOM05D005064 ORTHO05D006611 4.2e-82 309.7 285 56.8
Eucgr.K02953 Eucalyptus grandis HOM05D005064 ORTHO05D006611 9.3e-82 308.5 280 55.4
CsaV3_3G033440 Cucumis sativus L. HOM05D005064 ORTHO05D006611 1.2e-81 308.1 293 54.3
Oeu027330.4 Olea europaea HOM05D005064 ORTHO05D006611 6.0e-81 305.8 312 53.5
TWI74G0298 Tripterygium wilfordii HOM05D005064 ORTHO05D006611 6.0e-81 305.8 331 52.9
Cc06_g00810 Coffea canephora HOM05D005064 ORTHO05D006611 7.9e-81 305.4 313 54.0
Cpa.g.sc5.230 Carica papaya HOM05D005064 ORTHO05D006611 1.0e-80 305.1 287 55.1
Sabra14G0144800 Salix brachista HOM05D005064 ORTHO05D006611 2.3e-80 303.9 294 56.5
PSO339G1571 Papaver somniferum HOM05D005064 ORTHO05D006611 5.1e-80 302.8 319 54.5
TPR.G19329 Trifolium pratense HOM05D005064 ORTHO05D006611 8.7e-80 302.0 294 54.1
ECA234G3016 Erigeron canadensis HOM05D005064 ORTHO05D006611 1.5e-79 301.2 283 54.4
MSTRG.18977 Avicennia marina HOM05D005064 ORTHO05D006611 1.9e-79 300.8 293 53.6
vmacro04273 Vaccinium macrocarpon HOM05D005064 ORTHO05D006611 1.9e-79 300.8 340 53.2
CANSAT35G0044 Cannabis sativa HOM05D005064 ORTHO05D006611 2.5e-79 300.4 294 55.1
PSO801G0135 Papaver somniferum HOM05D005064 ORTHO05D006611 2.5e-79 300.4 319 54.2
MD01G1008700 Malus domestica HOM05D005064 ORTHO05D006611 3.3e-79 300.1 302 55.0
EL10Ac5g12491 Beta vulgaris HOM05D005064 ORTHO05D006611 4.3e-79 299.7 294 51.7
RcHm_v2.0_Chr3g0484931 Rosa chinensis HOM05D005064 ORTHO05D006611 1.3e-78 298.1 293 53.6
Aqoxy2G00779 Aquilegia oxysepala HOM05D005064 ORTHO05D006611 2.8e-78 297.0 281 54.8
Lj6g0012785 Lotus japonicus HOM05D005064 ORTHO05D006611 8.1e-78 295.4 297 51.5
Hund25531 Selenicereus undatus HOM05D005064 ORTHO05D006611 8.1e-78 295.4 297 52.5
Psat5g101280 Pisum sativum HOM05D005064 ORTHO05D006611 1.4e-77 294.7 300 51.3
FAN23G3111 Fragaria x ananassa HOM05D005064 ORTHO05D006611 2.4e-77 293.9 293 52.9
FAN26G2490 Fragaria x ananassa HOM05D005064 ORTHO05D006611 2.4e-77 293.9 293 52.9
FvH4_1g25820 Fragaria vesca HOM05D005064 ORTHO05D006611 3.1e-77 293.5 293 52.6
THA.LOC104816179 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 2.6e-76 290.4 298 54.4
AUR62030766 Chenopodium quinoa HOM05D005064 ORTHO05D006611 3.4e-76 290.0 294 51.7
AUR62030526 Chenopodium quinoa HOM05D005064 ORTHO05D006611 4.5e-76 289.7 294 51.7
Lsat_1_v5_gn_5_149520 Lactuca sativa HOM05D005064 ORTHO05D006611 4.5e-76 289.7 291 53.3
Medtr3g083250 Medicago truncatula HOM05D005064 ORTHO05D006611 7.6e-76 288.9 300 50.7
Glyma.13G010700 Glycine max HOM05D005064 ORTHO05D006611 2.9e-75 287.0 294 51.0
Ca_16367_v3 Cicer arietinum L. HOM05D005064 ORTHO05D006611 4.9e-75 286.2 300 50.0
AT5G01630 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 1.9e-74 284.3 288 51.0
Sp6g40890 Schrenkiella parvula HOM05D005064 ORTHO05D006611 3.2e-74 283.5 288 51.0
SalBow5G0042 Salvia bowleyana HOM05D005064 ORTHO05D006611 4.2e-74 283.1 328 48.5
SalBow5G1296 Salvia bowleyana HOM05D005064 ORTHO05D006611 4.2e-74 283.1 328 48.5
TPR.G18982 Trifolium pratense HOM05D005064 ORTHO05D006611 4.2e-74 283.1 277 51.3
VMungo0540G1710 Vigna mungo HOM05D005064 ORTHO05D006611 4.2e-74 283.1 295 52.2
AL6G10420 Arabidopsis lyrata HOM05D005064 ORTHO05D006611 5.5e-74 282.7 299 50.5
SGA_v2.0_scaffold85G26687 Striga asiatica HOM05D005064 ORTHO05D006611 7.1e-74 282.3 282 52.5
Thhalv10027627m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 3.5e-73 280.0 273 52.7
BraA03t09408Z Brassica rapa HOM05D005064 ORTHO05D006611 1.0e-72 278.5 291 50.5
CARHR211980 Cardamine hirsuta HOM05D005064 ORTHO05D006611 1.3e-72 278.1 288 50.3
Carub.0006s0020 Capsella rubella HOM05D005064 ORTHO05D006611 1.8e-72 277.7 288 51.7
MBI03_g13049_MAGBIO Magnolia biondii HOM05D005064 ORTHO05D006611 1.8e-72 277.7 284 51.1
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 3.0e-72 276.9 287 50.2
FAN19G0240 Fragaria x ananassa HOM05D005064 ORTHO05D006611 3.0e-72 276.9 329 47.1
Lalb_Chr22g0360891 Lupinus albus HOM05D005064 ORTHO05D006611 3.9e-72 276.6 294 49.7
A03p00180 Brassica napus HOM05D005064 ORTHO05D006611 5.1e-72 276.2 291 50.2
C03p00330 Brassica napus HOM05D005064 ORTHO05D006611 1.1e-71 275.0 291 49.8
CSS0001431 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 1.5e-71 274.6 335 48.7
Phvul.L001612 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 1.5e-71 274.6 296 52.0
Aa31LG1G23250 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.9e-71 274.2 287 49.8
BcaB01g06109 Brassica carinata HOM05D005064 ORTHO05D006611 2.5e-71 273.9 291 49.8
BolC3t12595H Brassica oleracea HOM05D005064 ORTHO05D006611 2.5e-71 273.9 291 49.8
AT4G00020 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 4.3e-71 273.1 286 50.0
Rhsim05G0225400 Rhododendron simsii HOM05D005064 ORTHO05D006611 3.7e-70 270.0 335 48.7
THA.LOC104798645 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 8.1e-70 268.9 288 52.4
Thhalv10012491m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 3.1e-69 266.9 291 49.1
BcaB01g06242 Brassica carinata HOM05D005064 ORTHO05D006611 1.2e-68 265.0 311 47.6
Sp7g05130 Schrenkiella parvula HOM05D005064 ORTHO05D006611 7.6e-68 262.3 287 48.4
A05p16640 Brassica napus HOM05D005064 ORTHO05D006611 1.9e-66 257.7 283 49.5
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea HOM05D005064 ORTHO05D006611 3.2e-66 256.9 296 49.7
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea HOM05D005064 ORTHO05D006611 3.5e-65 253.4 296 49.7
C06p17140 Brassica napus HOM05D005064 ORTHO05D006611 6.0e-65 252.7 283 48.8
ATR0594G137 Amborella trichopoda HOM05D005064 ORTHO05D006611 7.9e-65 252.3 284 48.2
BcaC08g44292 Brassica carinata HOM05D005064 ORTHO05D006611 7.9e-65 252.3 269 50.2
BolC6t36909H Brassica oleracea HOM05D005064 ORTHO05D006611 1.1e-63 248.4 269 49.8
HPP92_013858 Vanilla planifolia HOM05D005064 ORTHO05D006611 1.1e-63 248.4 283 49.1
HPP92_013842 Vanilla planifolia HOM05D005064 ORTHO05D006611 5.7e-63 246.1 283 49.5
BraA05t20569Z Brassica rapa HOM05D005064 ORTHO05D006611 1.6e-62 244.6 287 48.4
SHI12869 Sapria himalayana HOM05D005064 ORTHO05D006611 4.8e-62 243.0 294 46.6
FAN28G2142 Fragaria x ananassa HOM05D005064 ORTHO05D006611 1.1e-61 241.9 293 46.4
Os01g0164800 Oryza sativa ssp. japonica HOM05D005064 ORTHO05D006611 2.0e-60 237.7 284 45.4
Zm00001eb419130 Zea mays HOM05D005064 ORTHO05D006611 2.9e-59 233.8 301 42.2
Solyc02g050200.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 2.2e-54 217.6 237 54.4
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 1.4e-53 214.9 272 46.3
BcaB04g17743 Brassica carinata HOM05D005064 ORTHO05D006611 7.7e-52 209.1 222 50.0
CDE04G0109 Ceratophyllum demersum HOM05D005064 ORTHO05D006611 5.0e-51 206.5 209 51.2
Medtr6g033115 Medicago truncatula HOM05D005064 ORTHO05D006611 6.5e-51 206.1 275 46.2
unitig_21.g20911 Utricularia gibba HOM05D005064 ORTHO05D006611 1.4e-48 198.4 285 43.2
SEGI_19397 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 2.6e-47 194.1 316 39.2
SEGI_30642 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 2.6e-47 194.1 311 39.5
Ah.12g059020 Amaranthus hybridus HOM05D005064 ORTHO05D006611 5.7e-39 166.4 228 43.0
Nitab4.5_0021252g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 3.1e-37 160.6 129 76.0
Medtr0191s0030 Medicago truncatula HOM05D005064 ORTHO05D006611 4.0e-32 143.7 131 56.5
AagrBONN_evm.TU.Sc2ySwM_362.1800 Anthoceros agrestis HOM05D005064 ORTHO05D006611 5.2e-32 143.3 342 31.3
Mapoly0045s0096 Marchantia polymorpha HOM05D005064 ORTHO05D006611 8.2e-30 136.0 289 33.6
Haze_21134 Corylus avellana HOM05D005064 ORTHO05D006611 7.7e-28 129.4 313 33.9
Haze_21131 Corylus avellana HOM05D005064 ORTHO05D006611 1.0e-27 129.0 271 36.5
CBR_g19769 Chara braunii HOM05D005064 ORTHO05D006611 5.7e-23 113.2 309 28.2
Sc07g0001460 Simmondsia chinensis HOM05D005064 ORTHO05D006611 1.8e-16 91.7 195 32.8
CiPaw.09G214600 Carya illinoinensis HOM05D005064 ORTHO05D006611 5.4e-13 80.1 117 42.7
CSS0019886 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 5.0e-11 73.6 176 31.2
Sabra16G0120100 Salix brachista HOM05D005064 ORTHO05D050424 2.8e-09 67.8 54 59.3
Ah.11g042510 Amaranthus hybridus HOM05D005064 ORTHO05D006611 4.4e-07 60.5 271 28.0


User provided reference genes

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