Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006199g0030 Nicotiana tabacum HOM05D004601 ORTHO05D005806 2.7e-70 268.5 130 100.0
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 1.2e-54 216.5 114 90.4
Sopen00g010200 Solanum pennellii HOM05D004601 ORTHO05D005806 1.2e-54 216.5 114 90.4
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 1.2e-54 216.5 114 90.4
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 1.7e-51 206.1 114 83.3
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 8.3e-51 203.8 116 80.2
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 2.4e-50 202.2 114 82.5
Psat1g144440 Pisum sativum HOM05D004601 ORTHO05D005806 5.4e-50 201.1 117 78.6
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 7.0e-50 200.7 114 79.8
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 3.5e-49 198.4 114 77.2
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 3.5e-49 198.4 114 78.9
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 1.0e-48 196.8 114 79.8
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 1.0e-48 196.8 114 79.8
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 1.0e-48 196.8 114 78.9
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 1.0e-48 196.8 114 78.9
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 1.0e-48 196.8 114 78.9
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 1.7e-48 196.1 114 78.9
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 1.7e-48 196.1 114 77.2
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 2.9e-48 195.3 114 77.2
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 2.9e-48 195.3 109 84.4
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 3.9e-48 194.9 114 77.2
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 5.0e-48 194.5 114 77.2
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 6.6e-48 194.1 114 77.2
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 6.6e-48 194.1 114 77.2
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 6.6e-48 194.1 114 75.4
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 6.6e-48 194.1 114 77.2
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 6.6e-48 194.1 114 76.3
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 8.6e-48 193.7 114 76.3
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 8.6e-48 193.7 114 76.3
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 1.1e-47 193.4 114 77.2
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 1.9e-47 192.6 114 78.9
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 1.9e-47 192.6 114 77.2
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 2.5e-47 192.2 113 75.2
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 4.3e-47 191.4 114 74.6
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 4.3e-47 191.4 114 77.2
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 4.3e-47 191.4 114 74.6
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 5.6e-47 191.0 114 74.6
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 5.6e-47 191.0 111 76.6
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 5.6e-47 191.0 95 95.8
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 5.6e-47 191.0 114 76.3
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 5.6e-47 191.0 114 75.4
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 1.2e-46 189.9 114 73.7
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 1.2e-46 189.9 114 75.4
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.2e-46 189.9 114 74.6
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 1.2e-46 189.9 113 77.0
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 1.2e-46 189.9 114 75.4
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 1.2e-46 189.9 114 75.4
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 2.1e-46 189.1 114 77.2
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 3.6e-46 188.3 113 74.3
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 4.7e-46 188.0 114 74.6
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 6.1e-46 187.6 114 72.8
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 8.0e-46 187.2 114 72.8
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 1.0e-45 186.8 111 76.6
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 1.0e-45 186.8 108 77.8
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 1.0e-45 186.8 108 77.8
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 1.4e-45 186.4 108 77.8
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 1.4e-45 186.4 114 73.7
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 1.4e-45 186.4 111 75.7
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 1.8e-45 186.0 114 71.9
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 2.3e-45 185.7 108 76.9
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 2.3e-45 185.7 109 76.1
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 3.1e-45 185.3 114 71.9
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 4.0e-45 184.9 114 73.7
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 6.8e-45 184.1 126 69.0
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 8.9e-45 183.7 109 76.1
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 1.5e-44 183.0 108 75.0
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 3.4e-44 181.8 114 71.9
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 4.4e-44 181.4 114 71.1
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.7e-43 179.5 109 72.5
SEGI_14441 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 8.3e-43 177.2 117 69.2
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.9e-42 176.0 108 72.2
Glyma.09G060066 Glycine max HOM05D004601 ORTHO05D005806 2.7e-41 172.2 108 73.1
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 6.0e-41 171.0 113 68.1
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 7.8e-41 170.6 120 67.5
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 2.3e-40 169.1 95 82.1
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 8.6e-40 167.2 95 78.9
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 8.6e-40 167.2 114 68.4
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 5.6e-39 164.5 95 78.9
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 1.2e-38 163.3 97 74.2
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 5.2e-37 157.9 95 73.7
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 1.5e-36 156.4 114 61.4
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 2.6e-36 155.6 97 72.2
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 2.6e-36 155.6 95 70.5
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 1.4e-34 149.8 114 57.0
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.2e-33 146.7 114 57.9
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.2e-33 146.7 114 57.9
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 3.5e-33 145.2 114 63.2
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 7.8e-33 144.1 94 67.0
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.0e-32 143.7 114 61.4
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 3.9e-32 141.7 114 54.4
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 1.5e-31 139.8 114 61.4
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 1.8e-29 132.9 95 72.6
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 2.3e-29 132.5 77 76.6
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 3.7e-27 125.2 108 58.3
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 5.4e-26 121.3 95 65.3
Haze_22027 Corylus avellana HOM05D004601 ORTHO05D005806 1.0e-24 117.1 68 73.5
CBR_g50203 Chara braunii HOM05D004601 ORTHO05D005806 1.7e-24 116.3 95 56.8
SEGI_06603 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 1.7e-19 99.8 112 41.1
CSS0044178 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 6.0e-17 91.3 56 75.0
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 5.1e-16 88.2 113 37.2
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 1.4e-13 80.1 45 77.8
Haze_22028 Corylus avellana HOM05D004601 ORTHO05D005806 6.4e-11 71.2 36 86.1
MCO08G104 Micromonas commoda HOM05D004601 ORTHO05D005806 2.3e-08 62.8 91 30.8


User provided reference genes

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