Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006136g0040 Nicotiana tabacum HOM05D026818 ORTHO05D003718 1.8e-75 285.8 144 100.0
Nitab4.5_0002265g0120 Nicotiana tabacum HOM05D026818 ORTHO05D003718 3.5e-26 122.1 78 82.1
Nitab4.5_0002852g0010 Nicotiana tabacum HOM05D026818 ORTHO05D003718 2.1e-23 112.8 65 87.7
Nitab4.5_0004859g0020 Nicotiana tabacum HOM05D026818 ORTHO05D003718 1.7e-17 93.2 57 77.2
Nitab4.5_0006202g0010 Nicotiana tabacum HOM05D003266 ORTHO05D003718 1.1e-16 90.5 42 97.6
Nitab4.5_0002611g0110 Nicotiana tabacum HOM05D004977 ORTHO05D006454 1.7e-12 76.6 40 100.0
Nitab4.5_0003551g0050 Nicotiana tabacum HOM05D004977 ORTHO05D006454 1.7e-12 76.6 40 100.0
CAN.G160.14 Capsicum annuum HOM05D004977 ORTHO05D006454 8.4e-12 74.3 40 97.5
Solyc07g005880.3 Solanum lycopersicum HOM05D004977 ORTHO05D006454 1.1e-11 73.9 40 95.0
Sopen07g001990 Solanum pennellii HOM05D004977 ORTHO05D006454 1.1e-11 73.9 40 95.0
Peaxi162Scf00401g00211 Petunia axillaris HOM05D004977 ORTHO05D006454 1.4e-11 73.6 71 59.2
Nitab4.5_0003846g0030 Nicotiana tabacum HOM05D004977 ORTHO05D006454 1.9e-11 73.2 40 95.0
arahy.Tifrunner.gnm1.ann1.78MUYP Arachis hypogaea HOM05D004977 ORTHO05D006454 2.1e-10 69.7 70 58.6
SGA_v2.0_scaffold7G04011 Striga asiatica HOM05D004977 ORTHO05D006454 3.5e-10 68.9 39 89.7
Ciclev10027762m.g Citrus clementina HOM05D004977 ORTHO05D006454 6.0e-10 68.2 80 52.5
Medtr4g050180 Medicago truncatula HOM05D004977 ORTHO05D006454 6.0e-10 68.2 91 48.4
THA.LOC104810945 Tarenaya hassleriana HOM05D004977 ORTHO05D006454 6.0e-10 68.2 39 89.7
CiPaw.13G126500 Carya illinoinensis HOM05D004977 ORTHO05D006454 1.0e-09 67.4 70 55.7
Actinidia04910 Actinidia chinensis HOM05D004977 ORTHO05D006454 1.3e-09 67.0 39 87.2
Eucgr.J00591 Eucalyptus grandis HOM05D004977 ORTHO05D006454 1.3e-09 67.0 70 57.1
HanXRQChr16g0525891 Helianthus annuus HOM05D004977 ORTHO05D006454 1.3e-09 67.0 41 85.4
Nitab4.5_0002526g0060 Nicotiana tabacum HOM05D004977 ORTHO05D006454 1.8e-09 66.6 42 83.3
arahy.Tifrunner.gnm1.ann1.7R5ZBL Arachis hypogaea HOM05D004977 ORTHO05D006454 2.3e-09 66.2 70 55.7
Ca_19486_v3 Cicer arietinum L. HOM05D004977 ORTHO05D006454 2.3e-09 66.2 70 55.7
Cpa.g.sc103.53 Carica papaya HOM05D004977 ORTHO05D006454 3.0e-09 65.9 52 71.2
Phvul.011G100500 Phaseolus vulgaris HOM05D004977 ORTHO05D006454 3.0e-09 65.9 70 54.3
vmacro14315 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 3.0e-09 65.9 39 84.6
Dinv21727 Davidia involucrata HOM05D004977 ORTHO05D006454 3.9e-09 65.5 39 84.6
Oeu058189.1 Olea europaea HOM05D004977 ORTHO05D006454 3.9e-09 65.5 39 84.6
Sc11g0002670 Simmondsia chinensis HOM05D004977 ORTHO05D006454 3.9e-09 65.5 89 48.3
CAN.G1271.15 Capsicum annuum HOM05D004977 ORTHO05D006454 5.1e-09 65.1 40 85.0
Nn6g34596 Nelumbo nucifera HOM05D004977 ORTHO05D006454 5.1e-09 65.1 52 71.2
QL01p019084 Quercus lobata HOM05D004977 ORTHO05D006454 5.1e-09 65.1 39 84.6
Lalb_Chr01g0005801 Lupinus albus HOM05D004977 ORTHO05D006454 6.7e-09 64.7 70 54.3
VMungo1127G1403 Vigna mungo HOM05D004977 ORTHO05D006454 6.7e-09 64.7 70 52.9
CANSAT25G3123 Cannabis sativa HOM05D004977 ORTHO05D006454 8.7e-09 64.3 39 84.6
DCAR_018210 Daucus carota HOM05D004977 ORTHO05D006454 8.7e-09 64.3 39 84.6
TWI79G0798 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 8.7e-09 64.3 41 80.5
Haze_23597 Corylus avellana HOM05D004977 ORTHO05D006454 1.1e-08 63.9 35 94.3
Glyma.12G096100 Glycine max HOM05D004977 ORTHO05D006454 1.1e-08 63.9 40 77.5
Psat7g203480 Pisum sativum HOM05D004977 ORTHO05D006454 1.1e-08 63.9 39 82.1
PGR044G2329 Punica granatum HOM05D004977 ORTHO05D006454 1.1e-08 63.9 90 47.8
TWI31G0709 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 1.1e-08 63.9 41 80.5
vmacro04053 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 1.1e-08 63.9 39 82.1
Atru.chr7.2568 Acer truncatum HOM05D004977 ORTHO05D006454 1.5e-08 63.5 39 84.6
Hund25154 Selenicereus undatus HOM05D004977 ORTHO05D006454 1.5e-08 63.5 39 79.5
Ah.02g126710 Amaranthus hybridus HOM05D001549 ORTHO05D003098 1.9e-08 63.2 39 79.5
Cc01_g07900 Coffea canephora HOM05D004977 ORTHO05D006454 1.9e-08 63.2 39 79.5
Migut.D02372 Erythranthe guttata HOM05D004977 ORTHO05D006454 1.9e-08 63.2 35 88.6
Glyma.06G308700 Glycine max HOM05D004977 ORTHO05D006454 1.9e-08 63.2 70 51.4
Gohir.A05G395800 Gossypium hirsutum HOM05D004977 ORTHO05D006454 1.9e-08 63.2 39 79.5
Gohir.D04G019200 Gossypium hirsutum HOM05D004977 ORTHO05D006454 1.9e-08 63.2 39 79.5
Gorai.012G023000 Gossypium raimondii HOM05D004977 ORTHO05D006454 1.9e-08 63.2 39 79.5
Thecc.10G121800 Theobroma cacao HOM05D004977 ORTHO05D006454 1.9e-08 63.2 39 82.1
GSVIVG01037357001 Vitis vinifera HOM05D004977 ORTHO05D006454 2.5e-08 62.8 39 79.5
CDE05G0645 Ceratophyllum demersum HOM05D004977 ORTHO05D006454 3.3e-08 62.4 39 82.1
ECA234G1388 Erigeron canadensis HOM05D004977 ORTHO05D006454 3.3e-08 62.4 39 79.5
Os11g0572100 Oryza sativa ssp. japonica HOM05D004977 ORTHO05D006454 3.3e-08 62.4 48 72.9
Prupe.8G068000 Prunus persica HOM05D004977 ORTHO05D006454 3.3e-08 62.4 35 91.4
RcHm_v2.0_Chr5g0051061 Rosa chinensis HOM05D004977 ORTHO05D006454 3.3e-08 62.4 43 76.7
C08p43100 Brassica napus HOM05D004977 ORTHO05D006454 4.3e-08 62.0 47 63.8
CARHR191520 Cardamine hirsuta HOM05D004977 ORTHO05D006454 4.3e-08 62.0 39 76.9
Lsat_1_v5_gn_4_27921 Lactuca sativa HOM05D004977 ORTHO05D006454 4.3e-08 62.0 38 81.6
Lj3g0003647 Lotus japonicus HOM05D004977 ORTHO05D006454 4.3e-08 62.0 70 51.4
MD07G1072700 Malus domestica HOM05D004977 ORTHO05D006454 4.3e-08 62.0 43 76.7
AUR62007869 Chenopodium quinoa HOM05D004977 ORTHO05D006454 5.6e-08 61.6 36 86.1
Dinv18862 Davidia involucrata HOM05D004977 ORTHO05D006454 5.6e-08 61.6 39 76.9
PSO339G5000 Papaver somniferum HOM05D004977 ORTHO05D006454 5.6e-08 61.6 39 84.6
PSO384G3330 Papaver somniferum HOM05D004977 ORTHO05D006454 5.6e-08 61.6 39 84.6
QL01p019105 Quercus lobata HOM05D004977 ORTHO05D006454 5.6e-08 61.6 39 79.5
CSS0048805 Camellia sinensis var. sinensis HOM05D004977 ORTHO05D006454 7.4e-08 61.2 52 67.3
AUR62003055 Chenopodium quinoa HOM05D004977 ORTHO05D006454 7.4e-08 61.2 36 83.3
COL.COLO4_16322 Corchorus olitorius HOM05D004977 ORTHO05D006454 7.4e-08 61.2 39 79.5
Duzib114G0826 Durio zibethinus HOM05D004977 ORTHO05D006454 7.4e-08 61.2 39 79.5
Zm00001eb114240 Zea mays HOM05D004977 ORTHO05D006454 7.4e-08 61.2 48 70.8
Aa31LG1G13410 Aethionema arabicum HOM05D004977 ORTHO05D006454 9.6e-08 60.8 39 76.9
SMO358G0615 Selaginella moellendorffii HOM05D004977 ORTHO05D006454 9.6e-08 60.8 42 73.8
BcaC07g41303 Brassica carinata HOM05D004977 ORTHO05D006454 1.3e-07 60.5 49 67.3
MELO3C014528.2 Cucumis melo HOM05D004977 ORTHO05D006454 1.6e-07 60.1 35 82.9
CsaV3_6G038660 Cucumis sativus L. HOM05D004977 ORTHO05D006454 1.6e-07 60.1 35 82.9
Lj2C831G4 Lonicera japonica HOM05D004977 ORTHO05D006454 1.6e-07 60.1 39 76.9
Manes.04G055000 Manihot esculenta HOM05D004977 ORTHO05D006454 1.6e-07 60.1 39 76.9
ATR0697G081 Amborella trichopoda HOM05D004977 ORTHO05D006454 2.1e-07 59.7 35 85.7
ClCG02G022520 Citrullus lanatus HOM05D004977 ORTHO05D006454 2.1e-07 59.7 35 80.0
TAR633G0771 Trochodendron aralioides HOM05D004977 ORTHO05D006454 2.1e-07 59.7 39 74.4
BcaC03g13854 Brassica carinata HOM05D004977 ORTHO05D006454 2.8e-07 59.3 39 74.4
BolC2t07133H Brassica oleracea HOM05D004977 ORTHO05D006454 2.8e-07 59.3 39 74.4
BolC8t51866H Brassica oleracea HOM05D004977 ORTHO05D006454 2.8e-07 59.3 39 74.4
Thhalv10012587m.g Eutrema salsugineum HOM05D004977 ORTHO05D006454 2.8e-07 59.3 39 74.4
unitig_699.g19732 Utricularia gibba HOM05D004977 ORTHO05D006454 2.8e-07 59.3 39 76.9
HPP92_002246 Vanilla planifolia HOM05D004977 ORTHO05D006454 2.8e-07 59.3 38 76.3
AagrBONN_evm.TU.Sc2ySwM_228.4379 Anthoceros agrestis HOM05D004977 ORTHO05D006454 3.7e-07 58.9 66 56.1
AT5G22010 Arabidopsis thaliana HOM05D004977 ORTHO05D006454 3.7e-07 58.9 38 76.3
Sed0002287 Sechium edule HOM05D004977 ORTHO05D006454 3.7e-07 58.9 35 82.9
AL6G32970 Arabidopsis lyrata HOM05D004977 ORTHO05D006454 4.8e-07 58.5 39 71.8
Carub.0006s1965 Capsella rubella HOM05D004977 ORTHO05D006454 4.8e-07 58.5 39 71.8
BcaB05g22754 Brassica carinata HOM05D004977 ORTHO05D006454 6.2e-07 58.2 39 71.8
BNapus_Darmor_BZH_scaffold_38p00910 Brassica napus HOM05D004977 ORTHO05D006454 6.2e-07 58.2 39 71.8
BraA02t05635Z Brassica rapa HOM05D004977 ORTHO05D006454 6.2e-07 58.2 39 71.8
MSTRG.21003 Avicennia marina HOM05D004977 ORTHO05D006454 8.1e-07 57.8 35 85.7
MSTRG.21010 Avicennia marina HOM05D004977 ORTHO05D006454 8.1e-07 57.8 35 85.7
Migut.D02375 Erythranthe guttata HOM05D004977 ORTHO05D006454 8.1e-07 57.8 35 80.0
MD05G1047200 Malus domestica HOM05D004977 ORTHO05D006454 8.1e-07 57.8 43 72.1
SalBow6G4955 Salvia bowleyana HOM05D004977 ORTHO05D006454 8.1e-07 57.8 35 82.9
Sp6g23180 Schrenkiella parvula HOM05D004977 ORTHO05D006454 8.1e-07 57.8 39 69.2
TPR.G4657 Trifolium pratense HOM05D004977 ORTHO05D006454 8.1e-07 57.8 66 53.0
Mapoly0030s0061 Marchantia polymorpha HOM05D004977 ORTHO05D006454 1.1e-06 57.4 42 64.3
MD02G1244400 Malus domestica HOM05D004977 ORTHO05D006454 1.4e-06 57.0 43 72.1
EL10Ac6g14670 Beta vulgaris HOM05D004977 ORTHO05D006454 1.8e-06 56.6 38 78.9
FvH4_3g28250 Fragaria vesca HOM05D004977 ORTHO05D006454 1.8e-06 56.6 43 65.1
FAN11G1922 Fragaria x ananassa HOM05D004977 ORTHO05D006454 1.8e-06 56.6 43 65.1
FAN16G1264 Fragaria x ananassa HOM05D004977 ORTHO05D006454 1.8e-06 56.6 43 65.1
FAN21G3176 Fragaria x ananassa HOM05D004977 ORTHO05D006454 1.8e-06 56.6 43 65.1
Pp3c22_21030 Physcomitrium patens HOM05D004977 ORTHO05D006454 1.8e-06 56.6 67 46.3
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 1.8e-06 56.6 39 76.9
Potri.001G213900 Populus trichocarpa HOM05D004977 ORTHO05D006454 3.1e-06 55.8 36 77.8
Sabra04G0149200 Salix brachista HOM05D004977 ORTHO05D006454 3.1e-06 55.8 36 77.8
Aqoxy1G00589 Aquilegia oxysepala HOM05D004977 ORTHO05D006454 5.3e-06 55.1 39 74.4


User provided reference genes

Program Settings