Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 0.0e+00 1552.7 791 100.0
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.9e-307 1058.9 759 76.4
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.4e-270 936.4 796 64.7
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 2.3e-268 929.1 797 64.5
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 1.4e-265 919.8 782 64.6
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 1.3e-263 913.3 783 64.6
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 6.6e-260 901.0 796 62.8
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 7.1e-254 880.9 799 61.3
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 6.9e-217 758.1 781 55.6
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 2.5e-206 723.0 794 52.8
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 9.4e-206 721.1 789 54.4
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 2.3e-204 716.5 797 52.3
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 5.2e-204 715.3 832 51.0
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 3.8e-199 699.1 780 52.1
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 3.2e-198 696.0 791 52.3
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.0e-196 691.0 794 51.6
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 4.5e-192 675.6 783 51.6
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.7e-191 673.7 840 48.6
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 4.0e-188 662.5 789 49.0
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 8.8e-188 661.4 794 50.3
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 3.4e-187 659.4 802 50.4
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 8.3e-186 654.8 802 49.5
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 7.0e-185 651.7 803 48.9
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 5.9e-184 648.7 805 48.9
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 6.6e-183 645.2 790 50.0
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 8.6e-183 644.8 785 49.7
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 8.6e-183 644.8 785 50.2
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 2.1e-181 640.2 800 49.0
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 1.7e-178 630.6 787 49.9
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 2.2e-178 630.2 830 50.4
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 8.3e-178 628.2 859 46.0
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 2.4e-177 626.7 787 49.6
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 3.1e-177 626.3 811 49.0
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 3.1e-177 626.3 787 48.2
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 5.9e-176 622.1 796 50.3
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 2.9e-175 619.8 819 47.5
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 3.9e-175 619.4 799 48.6
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 1.1e-174 617.8 788 47.6
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 2.8e-173 613.2 802 49.1
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 2.8e-173 613.2 791 47.8
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 2.0e-171 607.1 708 51.0
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 1.9e-169 600.5 793 47.2
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 6.0e-168 595.5 803 46.8
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 1.5e-166 590.9 799 45.8
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 2.5e-166 590.1 803 46.7
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 9.5e-166 588.2 785 47.3
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 2.8e-165 586.6 792 48.2
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 4.7e-165 585.9 803 46.7
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.4e-164 584.3 805 45.6
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 2.3e-164 583.6 793 47.8
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 4.4e-163 579.3 788 47.1
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.9e-161 573.9 817 46.8
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 5.4e-161 572.4 790 44.9
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.6e-160 570.9 817 46.5
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 2.7e-160 570.1 794 46.7
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 3.0e-159 566.6 798 47.0
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 1.9e-158 563.9 794 46.0
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 4.3e-158 562.8 793 44.8
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 3.6e-157 559.7 794 45.8
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.4e-156 557.8 829 45.2
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 8.9e-156 555.1 810 43.2
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 2.6e-155 553.5 597 55.4
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 4.4e-155 552.7 792 45.3
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 7.5e-155 552.0 800 46.4
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 1.3e-154 551.2 802 45.3
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 2.2e-154 550.4 812 44.3
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 3.7e-154 549.7 801 42.7
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 6.4e-154 548.9 796 45.2
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 1.4e-153 547.7 808 42.7
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 1.4e-153 547.7 794 45.3
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 3.2e-153 546.6 795 45.4
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 7.1e-153 545.4 791 44.5
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 9.2e-153 545.0 800 44.6
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 1.6e-152 544.3 659 49.9
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 2.7e-152 543.5 801 42.3
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 2.3e-151 540.4 794 44.0
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 6.6e-151 538.9 798 41.7
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 2.0e-147 527.3 805 43.2
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 3.2e-145 520.0 775 44.5
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 1.2e-144 518.1 797 42.9
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 2.7e-144 516.9 794 42.7
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 4.6e-144 516.2 784 44.0
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 3.9e-143 513.1 830 42.4
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 1.3e-141 508.1 792 42.8
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 2.1e-141 507.3 793 44.1
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 5.3e-140 502.7 807 43.4
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 6.9e-140 502.3 775 43.1
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 1.5e-139 501.1 805 43.1
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 2.0e-139 500.7 786 44.3
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 2.2e-138 497.3 786 44.5
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 1.1e-137 495.0 789 43.0
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 3.2e-137 493.4 804 43.2
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 7.1e-137 492.3 803 43.2
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 1.2e-136 491.5 802 42.5
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 2.7e-136 490.3 802 43.3
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 3.5e-136 490.0 785 44.1
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 8.7e-135 485.3 800 42.9
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 1.5e-134 484.6 778 42.8
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 6.9e-132 475.7 795 41.4
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 1.8e-127 461.1 778 41.3
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 8.1e-125 452.2 800 40.6
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 1.1e-124 451.8 785 41.1
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 2.4e-124 450.7 794 41.2
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 3.4e-123 446.8 535 49.3
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 9.3e-121 438.7 786 41.6
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 9.3e-121 438.7 786 41.6
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 1.6e-120 438.0 786 41.7
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 1.3e-119 434.9 780 41.2
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 2.5e-118 430.6 789 40.6
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 5.7e-118 429.5 785 40.5
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 3.7e-117 426.8 803 39.9
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 4.8e-117 426.4 800 40.1
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 5.7e-110 402.9 570 45.3
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 6.3e-109 399.4 798 35.0
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 5.9e-107 392.9 801 37.8
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 1.4e-103 381.7 445 52.1
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 1.3e-101 375.2 784 37.1
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 2.2e-98 364.4 795 35.2
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 2.8e-93 347.4 484 46.5
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 3.1e-92 344.0 789 33.5
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 7.2e-89 332.8 800 35.5
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 2.2e-85 321.2 312 57.1
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 8.2e-85 319.3 655 37.4
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 8.2e-85 319.3 813 32.6
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 2.8e-77 294.3 426 42.0
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 4.5e-75 287.0 728 32.0
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 2.6e-70 271.2 812 31.4
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 9.8e-62 242.7 830 29.2
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 4.1e-60 237.3 808 28.7
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 5.4e-60 236.9 424 37.7
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 1.6e-59 235.3 332 42.8
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 7.0e-52 209.9 796 27.3
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 5.6e-49 200.3 808 27.2
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 1.6e-48 198.7 808 27.7
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 1.6e-48 198.7 206 54.4
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 1.2e-46 192.6 359 37.3
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 1.1e-44 186.0 788 27.3
SHI29649 Sapria himalayana HOM05D001849 ORTHO05D004075 1.2e-43 182.6 448 35.0
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 4.6e-43 180.6 215 52.6
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 1.3e-42 179.1 783 24.8
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 1.2e-40 172.6 340 35.3
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 4.7e-40 170.6 630 30.6
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 4.7e-40 170.6 671 27.9
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 6.2e-40 170.2 588 27.6
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 1.8e-39 168.7 434 31.3
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 6.8e-39 166.8 653 27.4
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 1.0e-34 152.9 232 41.4
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 1.5e-33 149.1 189 48.1
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 5.6e-33 147.1 687 28.1
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 2.8e-32 144.8 306 36.6
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 4.7e-32 144.1 682 26.0
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.9e-28 132.1 657 26.3
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 6.0e-27 127.1 332 33.4
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 5.1e-26 124.0 284 31.3
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 4.3e-25 120.9 324 29.0
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 3.1e-23 114.8 177 36.7
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 1.7e-21 109.0 80 60.0
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 3.8e-21 107.8 853 21.9
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 1.0e-18 99.8 167 30.5
BcaB03g14986 Brassica carinata HOM05D001849 ORTHO05D004075 1.6e-16 92.4 152 42.8
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 2.1e-16 92.0 144 41.7
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 3.6e-16 91.3 240 35.4
Cpa.g.sc25.149 Carica papaya HOM05D020865 ORTHO05D004075 9.3e-12 76.6 135 42.2
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 4.6e-11 74.3 90 44.4
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 5.1e-10 70.9 88 42.0
MCO11G122 Micromonas commoda HOM05D001849 ORTHO05D004075 1.1e-09 69.7 86 40.7
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 7.4e-09 67.0 80 46.2
BcaC03g15372 Brassica carinata HOM05D001849 ORTHO05D004075 8.1e-08 63.5 206 27.2


User provided reference genes

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