Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.4e-125 453.4 313 100.0
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.1e-114 417.2 334 88.6
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 3.7e-97 359.0 202 87.6
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 2.0e-90 336.7 192 86.5
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 2.0e-90 336.7 192 86.5
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 1.9e-85 320.1 309 70.9
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 2.8e-84 316.2 294 60.2
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 2.2e-81 306.6 194 77.3
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 1.1e-80 304.3 186 79.0
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 2.4e-80 303.1 198 75.3
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 3.2e-80 302.8 202 74.3
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 1.2e-79 300.8 194 76.3
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 2.0e-79 300.1 196 73.5
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 2.7e-79 299.7 169 87.0
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 7.8e-79 298.1 196 75.0
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 1.0e-78 297.7 195 74.4
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 1.0e-78 297.7 195 74.4
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 2.3e-78 296.6 196 71.9
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 1.5e-77 293.9 198 72.7
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 3.3e-77 292.7 191 73.3
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 3.3e-77 292.7 191 75.4
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 5.6e-77 292.0 201 71.1
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 1.6e-76 290.4 198 72.2
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 2.1e-76 290.0 201 70.6
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 2.8e-76 289.7 194 72.7
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 2.8e-76 289.7 191 73.8
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 2.8e-76 289.7 190 74.2
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 2.8e-76 289.7 197 73.1
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 3.6e-76 289.3 205 69.3
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 4.7e-76 288.9 194 73.2
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 6.2e-76 288.5 186 74.7
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 8.0e-76 288.1 195 71.8
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 1.4e-75 287.3 191 73.8
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 2.3e-75 286.6 191 71.7
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 2.3e-75 286.6 191 72.3
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 3.1e-75 286.2 191 73.8
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 4.0e-75 285.8 197 69.0
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 4.0e-75 285.8 202 67.8
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 4.0e-75 285.8 199 69.3
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 5.2e-75 285.4 191 73.8
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 5.2e-75 285.4 202 68.3
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 5.2e-75 285.4 196 71.4
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 8.9e-75 284.6 191 73.3
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 1.2e-74 284.3 191 73.3
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 1.5e-74 283.9 191 73.3
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 1.5e-74 283.9 197 70.1
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 1.5e-74 283.9 198 69.2
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 1.5e-74 283.9 191 73.3
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 2.0e-74 283.5 191 71.7
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 2.6e-74 283.1 191 73.3
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 2.6e-74 283.1 196 68.9
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 2.6e-74 283.1 191 73.3
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 3.4e-74 282.7 193 72.5
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 3.4e-74 282.7 194 70.1
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 4.4e-74 282.3 191 72.3
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 4.4e-74 282.3 199 70.9
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 5.8e-74 282.0 193 72.5
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 4.9e-73 278.9 197 70.6
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 6.4e-73 278.5 309 64.1
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 8.3e-73 278.1 191 71.7
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 4.1e-72 275.8 194 69.1
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 7.0e-72 275.0 191 70.7
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 1.2e-71 274.2 194 68.6
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 2.1e-71 273.5 191 71.2
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 2.1e-71 273.5 194 68.6
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 2.1e-71 273.5 197 68.5
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 7.8e-71 271.6 192 68.2
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 5.1e-70 268.9 194 68.6
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 4.3e-69 265.8 195 67.2
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 4.0e-67 259.2 193 66.8
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 7.5e-66 255.0 200 62.5
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 6.0e-63 245.4 197 62.9
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 5.1e-62 242.3 175 70.3
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 1.5e-61 240.7 191 63.9
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 1.1e-59 234.6 190 61.6
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 1.4e-59 234.2 193 61.1
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 1.8e-59 233.8 175 66.3
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 1.8e-59 233.8 155 71.0
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 2.0e-58 230.3 155 72.9
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 2.6e-58 229.9 192 57.8
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 2.7e-55 219.9 155 71.6
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 6.0e-55 218.8 175 61.1
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 3.3e-53 213.0 165 66.7
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 7.3e-53 211.8 195 55.9
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 3.2e-48 196.4 263 46.8
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 4.2e-40 169.5 202 45.5
Haze_01695 Corylus avellana HOM05D004517 ORTHO05D005366 3.5e-39 166.4 236 43.6
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 1.1e-32 144.8 108 63.0
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 3.7e-28 129.8 77 83.1
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 3.9e-06 56.6 40 60.0


User provided reference genes

Program Settings