Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003358g0100 Nicotiana tabacum HOM05D005045 ORTHO05D006386 1.1e-68 263.1 129 100.0
CAN.G765.38 Capsicum annuum HOM05D005045 ORTHO05D006386 3.7e-67 258.1 126 100.0
Nitab4.5_0002260g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 3.7e-67 258.1 126 100.0
Sopen05g032270 Solanum pennellii HOM05D005045 ORTHO05D006386 3.1e-66 255.0 126 97.6
Peaxi162Scf00423g00410 Petunia axillaris HOM05D005045 ORTHO05D006386 6.9e-66 253.8 126 96.8
Actinidia28996 Actinidia chinensis HOM05D005045 ORTHO05D006386 1.2e-65 253.1 126 96.8
Ciclev10004166m.g Citrus clementina HOM05D005045 ORTHO05D006386 1.2e-65 253.1 126 96.8
CiPaw.01G116800 Carya illinoinensis HOM05D005045 ORTHO05D006386 2.6e-65 251.9 126 96.0
ClCG05G003110 Citrullus lanatus HOM05D005045 ORTHO05D006386 2.6e-65 251.9 127 94.5
Solyc05g053800.3 Solanum lycopersicum HOM05D005045 ORTHO05D006386 2.6e-65 251.9 126 96.8
Glyma.18G002400 Glycine max HOM05D005045 ORTHO05D006386 3.4e-65 251.5 126 95.2
Phvul.001G266800 Phaseolus vulgaris HOM05D005045 ORTHO05D006386 3.4e-65 251.5 126 95.2
arahy.Tifrunner.gnm1.ann1.2Y4S4L Arachis hypogaea HOM05D005045 ORTHO05D006386 4.5e-65 251.1 126 96.0
arahy.Tifrunner.gnm1.ann1.RK3EBX Arachis hypogaea HOM05D005045 ORTHO05D006386 4.5e-65 251.1 126 96.0
Dinv38168 Davidia involucrata HOM05D005045 ORTHO05D006386 4.5e-65 251.1 126 96.0
Gohir.A02G019100 Gossypium hirsutum HOM05D005045 ORTHO05D006386 4.5e-65 251.1 126 95.2
Gohir.D02G022400 Gossypium hirsutum HOM05D005045 ORTHO05D006386 4.5e-65 251.1 126 95.2
Gorai.005G027800 Gossypium raimondii HOM05D005045 ORTHO05D006386 4.5e-65 251.1 126 95.2
CSS0020032 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 5.9e-65 250.8 126 94.4
MELO3C006292.2 Cucumis melo HOM05D005045 ORTHO05D006386 5.9e-65 250.8 126 95.2
MBI07_g27366_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 5.9e-65 250.8 126 96.8
Sed0026716 Sechium edule HOM05D005045 ORTHO05D006386 5.9e-65 250.8 126 95.2
Cfa014961 Carpinus fangiana HOM05D005045 ORTHO05D006386 7.7e-65 250.4 126 95.2
Haze_11653 Corylus avellana HOM05D005045 ORTHO05D006386 7.7e-65 250.4 126 95.2
Lalb_Chr11g0075871 Lupinus albus HOM05D005045 ORTHO05D006386 7.7e-65 250.4 126 95.2
COL.COLO4_20231 Corchorus olitorius HOM05D005045 ORTHO05D006386 1.0e-64 250.0 127 94.5
TAR362G1154 Trochodendron aralioides HOM05D005045 ORTHO05D006386 1.0e-64 250.0 126 95.2
Atru.chr4.1578 Acer truncatum HOM05D005045 ORTHO05D006386 1.3e-64 249.6 126 94.4
MSTRG.9796 Avicennia marina HOM05D005045 ORTHO05D006386 1.3e-64 249.6 126 96.8
Cpa.g.sc157.48 Carica papaya HOM05D005045 ORTHO05D006386 1.3e-64 249.6 126 94.4
Manes.03G144200 Manihot esculenta HOM05D005045 ORTHO05D006386 1.3e-64 249.6 126 94.4
Ca_16406_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.7e-64 249.2 126 94.4
Ca_16414_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.7e-64 249.2 126 94.4
CsaV3_3G010730 Cucumis sativus L. HOM05D005045 ORTHO05D006386 1.7e-64 249.2 126 94.4
Medtr3g084300 Medicago truncatula HOM05D005045 ORTHO05D006386 1.7e-64 249.2 126 94.4
Psat5g100040 Pisum sativum HOM05D005045 ORTHO05D006386 1.7e-64 249.2 126 94.4
Aa31LG5G5040 Aethionema arabicum HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
BcaB01g04004 Brassica carinata HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
A03p17990 Brassica napus HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
C03p21030 Brassica napus HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
BolC3t14484H Brassica oleracea HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
BraA03t11060Z Brassica rapa HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
Thhalv10016151m.g Eutrema salsugineum HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
Potri.001G320300 Populus trichocarpa HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
Sp4g14350 Schrenkiella parvula HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
SGA_v2.0_scaffold27G11679 Striga asiatica HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 96.0
Thecc.04G195000 Theobroma cacao HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 95.2
VMungo1383G3533 Vigna mungo HOM05D005045 ORTHO05D006386 2.2e-64 248.8 126 93.7
AL4G27320 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 2.9e-64 248.4 126 95.2
AT2G31970 Arabidopsis thaliana HOM05D005045 ORTHO05D006386 2.9e-64 248.4 126 95.2
Carub.0004s1329 Capsella rubella HOM05D005045 ORTHO05D006386 2.9e-64 248.4 126 95.2
Lj6g0005100 Lotus japonicus HOM05D005045 ORTHO05D006386 2.9e-64 248.4 126 94.4
SalBow8G0828 Salvia bowleyana HOM05D005045 ORTHO05D006386 2.9e-64 248.4 126 96.0
DCAR_005488 Daucus carota HOM05D005045 ORTHO05D006386 3.8e-64 248.1 126 93.7
PSO017G0058 Papaver somniferum HOM05D005045 ORTHO05D006386 5.0e-64 247.7 126 94.4
Sabra16G0202900 Salix brachista HOM05D005045 ORTHO05D006386 5.0e-64 247.7 126 95.2
THA.LOC104826172 Tarenaya hassleriana HOM05D005045 ORTHO05D006386 6.5e-64 247.3 126 95.2
TWI53G1845 Tripterygium wilfordii HOM05D005045 ORTHO05D006386 8.5e-64 246.9 126 93.7
Zm00001eb181120 Zea mays HOM05D005045 ORTHO05D006386 1.1e-63 246.5 126 92.1
Aqoxy2G03932 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 2.5e-63 245.4 126 92.9
Cc03_g08470 Coffea canephora HOM05D005045 ORTHO05D006386 3.2e-63 245.0 126 95.2
Migut.G00767 Erythranthe guttata HOM05D005045 ORTHO05D006386 3.2e-63 245.0 126 95.2
vmacro15566 Vaccinium macrocarpon HOM05D005045 ORTHO05D006386 9.4e-63 243.4 133 90.2
HPP92_024209 Vanilla planifolia HOM05D005045 ORTHO05D006386 9.4e-63 243.4 126 92.1
ATR0561G148 Amborella trichopoda HOM05D005045 ORTHO05D006386 1.6e-62 242.7 126 92.1
RcHm_v2.0_Chr4g0413591 Rosa chinensis HOM05D005045 ORTHO05D006386 1.6e-62 242.7 126 93.7
SHI26063 Sapria himalayana HOM05D005045 ORTHO05D006386 1.6e-62 242.7 127 90.6
Nn3g20083 Nelumbo nucifera HOM05D005045 ORTHO05D006386 2.1e-62 242.3 126 92.1
Prupe.1G165000 Prunus persica HOM05D005045 ORTHO05D006386 2.1e-62 242.3 126 91.3
SEGI_03959 Sequoiadendron giganteum HOM05D005045 ORTHO05D006386 2.1e-62 242.3 126 94.4
FvH4_4g13300 Fragaria vesca HOM05D005045 ORTHO05D006386 2.7e-62 241.9 126 92.1
FAN07G1455 Fragaria x ananassa HOM05D005045 ORTHO05D006386 2.7e-62 241.9 126 92.1
FAN12G2321 Fragaria x ananassa HOM05D005045 ORTHO05D006386 2.7e-62 241.9 126 92.1
FAN22G0494 Fragaria x ananassa HOM05D005045 ORTHO05D006386 2.7e-62 241.9 126 92.1
MD05G1230300 Malus domestica HOM05D005045 ORTHO05D006386 2.7e-62 241.9 126 90.5
EL10Ac3g07454 Beta vulgaris HOM05D005045 ORTHO05D006386 3.6e-62 241.5 126 92.9
ECA233G4939 Erigeron canadensis HOM05D005045 ORTHO05D006386 4.6e-62 241.1 126 92.1
unitig_0.g1960 Utricularia gibba HOM05D005045 ORTHO05D006386 4.6e-62 241.1 126 92.9
HanXRQChr02g0058481 Helianthus annuus HOM05D005045 ORTHO05D006386 1.8e-61 239.2 126 91.3
Lsat_1_v5_gn_6_59140 Lactuca sativa HOM05D005045 ORTHO05D006386 3.0e-61 238.4 126 91.3
TPR.G25379 Trifolium pratense HOM05D005045 ORTHO05D006386 1.5e-60 236.1 146 80.8
AagrBONN_evm.TU.Sc2ySwM_368.995 Anthoceros agrestis HOM05D002013 ORTHO05D002293 2.6e-60 235.3 126 89.7
Mapoly0027s0186 Marchantia polymorpha HOM05D005045 ORTHO05D006386 5.3e-58 227.6 126 88.1
SMO356G0717 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 9.1e-58 226.9 126 86.5
Pp3c10_3760 Physcomitrium patens HOM05D005045 ORTHO05D006386 2.0e-57 225.7 126 88.1
Duzib151G0179 Durio zibethinus HOM05D005045 ORTHO05D006386 1.2e-46 189.9 97 93.8
Ah.04g149400 Amaranthus hybridus HOM05D005045 ORTHO05D006386 2.7e-46 188.7 97 92.8
arahy.Tifrunner.gnm1.ann1.KK4CMR Arachis hypogaea HOM05D005045 ORTHO05D006386 8.0e-46 187.2 97 91.8
CDE02G0777 Ceratophyllum demersum HOM05D005045 ORTHO05D006386 2.4e-42 175.6 126 73.8
Lj6C381G5 Lonicera japonica HOM05D005045 ORTHO05D006386 3.1e-42 175.3 126 74.6
PGR142G0016 Punica granatum HOM05D005045 ORTHO05D006386 2.7e-41 172.2 126 73.8
PRCOL_00000463 Prasinoderma coloniale HOM05D005045 ORTHO05D006386 3.8e-40 168.3 126 60.3
AUR62020862 Chenopodium quinoa HOM05D005045 ORTHO05D006386 2.5e-39 165.6 93 86.0
Cre03.g192550 Chlamydomonas reinhardtii HOM05D005045 ORTHO05D006386 6.1e-38 161.0 126 57.9
MCO01G132 Micromonas commoda HOM05D005045 ORTHO05D006386 1.0e-37 160.2 127 63.0
Prupe.1G180400 Prunus persica HOM05D005045 ORTHO05D006386 1.3e-35 153.3 120 64.2
Rhsim02G0061800 Rhododendron simsii HOM05D005045 ORTHO05D006386 4.1e-34 148.3 72 93.1
Actinidia11455 Actinidia chinensis HOM05D005045 ORTHO05D006386 4.5e-33 144.8 121 62.8
CBR_g44539 Chara braunii HOM05D005045 ORTHO05D006386 2.0e-28 129.4 70 84.3
Cfa022909 Carpinus fangiana HOM05D005045 ORTHO05D006386 2.6e-28 129.0 120 54.2
MBI07_g45033_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 2.3e-24 115.9 100 64.0
Rhsim02G0061900 Rhododendron simsii HOM05D005045 ORTHO05D006386 5.6e-23 111.3 56 98.2
SMO217G0009 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 2.6e-20 102.4 56 89.3


User provided reference genes

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