Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003358g0090 Nicotiana tabacum HOM05D005045 ORTHO05D006386 6.2e-61 237.3 119 100.0
SGA_v2.0_scaffold27G11679 Striga asiatica HOM05D005045 ORTHO05D006386 1.3e-58 229.6 119 95.8
CAN.G765.38 Capsicum annuum HOM05D005045 ORTHO05D006386 7.1e-57 223.8 140 84.3
Peaxi162Scf00423g00410 Petunia axillaris HOM05D005045 ORTHO05D006386 7.1e-57 223.8 140 84.3
Solyc05g053800.3 Solanum lycopersicum HOM05D005045 ORTHO05D006386 7.1e-57 223.8 140 84.3
Sopen05g032270 Solanum pennellii HOM05D005045 ORTHO05D006386 7.1e-57 223.8 140 84.3
Cfa014961 Carpinus fangiana HOM05D005045 ORTHO05D006386 1.3e-55 219.5 140 82.9
CiPaw.01G116800 Carya illinoinensis HOM05D005045 ORTHO05D006386 1.3e-55 219.5 140 82.9
Haze_11653 Corylus avellana HOM05D005045 ORTHO05D006386 1.3e-55 219.5 140 82.9
CsaV3_3G010730 Cucumis sativus L. HOM05D005045 ORTHO05D006386 1.3e-55 219.5 140 82.9
Nn3g20083 Nelumbo nucifera HOM05D005045 ORTHO05D006386 1.3e-55 219.5 140 82.9
PSO017G0058 Papaver somniferum HOM05D005045 ORTHO05D006386 1.3e-55 219.5 140 82.9
Oeu034322.3 Olea europaea HOM05D005045 ORTHO05D006386 2.3e-55 218.8 140 82.1
HPP92_024209 Vanilla planifolia HOM05D005045 ORTHO05D006386 2.3e-55 218.8 140 82.1
Atru.chr4.1578 Acer truncatum HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
MSTRG.9796 Avicennia marina HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
Cpa.g.sc157.48 Carica papaya HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.9
CDE02G0777 Ceratophyllum demersum HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
ClCG05G003110 Citrullus lanatus HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
COL.COLO4_20233 Corchorus olitorius HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
MELO3C006292.2 Cucumis melo HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
DCAR_005488 Daucus carota HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
Dinv38168 Davidia involucrata HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
Duzib151G0179 Durio zibethinus HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
QL06p025788 Quercus lobata HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
SalBow8G0828 Salvia bowleyana HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
Thecc.04G195000 Theobroma cacao HOM05D005045 ORTHO05D006386 3.0e-55 218.4 140 82.1
Lj6g0005100 Lotus japonicus HOM05D005045 ORTHO05D006386 3.9e-55 218.0 140 82.1
Aa31LG5G5040 Aethionema arabicum HOM05D005045 ORTHO05D006386 5.1e-55 217.6 140 82.1
Aqoxy2G03932 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 5.1e-55 217.6 140 82.9
Migut.G00767 Erythranthe guttata HOM05D005045 ORTHO05D006386 5.1e-55 217.6 140 82.1
Glyma.18G002400 Glycine max HOM05D005045 ORTHO05D006386 6.6e-55 217.2 140 81.4
Phvul.001G266800 Phaseolus vulgaris HOM05D005045 ORTHO05D006386 6.6e-55 217.2 140 81.4
Rhsim02G0061900 Rhododendron simsii HOM05D005045 ORTHO05D006386 6.6e-55 217.2 140 82.1
Sed0026716 Sechium edule HOM05D005045 ORTHO05D006386 6.6e-55 217.2 140 81.4
vmacro15566 Vaccinium macrocarpon HOM05D005045 ORTHO05D006386 6.6e-55 217.2 140 82.1
VMungo1383G3533 Vigna mungo HOM05D005045 ORTHO05D006386 6.6e-55 217.2 140 81.4
Cc03_g08470 Coffea canephora HOM05D005045 ORTHO05D006386 1.1e-54 216.5 140 81.4
Potri.001G320300 Populus trichocarpa HOM05D005045 ORTHO05D006386 1.1e-54 216.5 140 81.4
Sabra16G0202900 Salix brachista HOM05D005045 ORTHO05D006386 1.1e-54 216.5 140 81.4
THA.LOC104826172 Tarenaya hassleriana HOM05D005045 ORTHO05D006386 1.1e-54 216.5 140 81.4
EL10Ac3g07454 Beta vulgaris HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 82.1
BcaB01g04004 Brassica carinata HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 81.4
BcaC01g05925 Brassica carinata HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 81.4
BcaNung07126 Brassica carinata HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 81.4
CARHR125720 Cardamine hirsuta HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 81.4
Ca_16407_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 82.1
Ca_16416_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 82.1
Thhalv10016151m.g Eutrema salsugineum HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 81.4
Psat5g100040 Pisum sativum HOM05D005045 ORTHO05D006386 1.5e-54 216.1 140 82.1
Gohir.A02G019100 Gossypium hirsutum HOM05D005045 ORTHO05D006386 1.9e-54 215.7 140 81.4
Gohir.D02G022400 Gossypium hirsutum HOM05D005045 ORTHO05D006386 1.9e-54 215.7 140 81.4
Gorai.005G027800 Gossypium raimondii HOM05D005045 ORTHO05D006386 1.9e-54 215.7 140 81.4
Eucgr.H00025 Eucalyptus grandis HOM05D005045 ORTHO05D006386 2.5e-54 215.3 140 80.7
AL4G27320 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 3.3e-54 214.9 140 80.7
AL80U10080 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 3.3e-54 214.9 140 80.7
AT2G31970 Arabidopsis thaliana HOM05D005045 ORTHO05D006386 3.3e-54 214.9 140 80.7
Carub.0004s1329 Capsella rubella HOM05D005045 ORTHO05D006386 3.3e-54 214.9 140 80.7
Manes.03G144200 Manihot esculenta HOM05D005045 ORTHO05D006386 3.3e-54 214.9 140 80.7
PGR142G0016 Punica granatum HOM05D005045 ORTHO05D006386 3.3e-54 214.9 140 80.7
Sp4g14350 Schrenkiella parvula HOM05D005045 ORTHO05D006386 3.3e-54 214.9 140 80.7
Lalb_Chr11g0075871 Lupinus albus HOM05D005045 ORTHO05D006386 4.3e-54 214.5 140 80.7
TWI53G1845 Tripterygium wilfordii HOM05D005045 ORTHO05D006386 4.3e-54 214.5 140 80.7
CSS0020032 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 5.6e-54 214.2 140 81.4
CSS0025820 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 5.6e-54 214.2 140 81.4
Ah.04g149410 Amaranthus hybridus HOM05D005045 ORTHO05D006386 7.3e-54 213.8 140 80.7
A03p17990 Brassica napus HOM05D005045 ORTHO05D006386 7.3e-54 213.8 146 78.1
Ciclev10004166m.g Citrus clementina HOM05D005045 ORTHO05D006386 7.3e-54 213.8 140 80.7
TPR.G25379 Trifolium pratense HOM05D005045 ORTHO05D006386 7.3e-54 213.8 140 80.7
AUR62018556 Chenopodium quinoa HOM05D005045 ORTHO05D006386 9.6e-54 213.4 140 80.0
AUR62020863 Chenopodium quinoa HOM05D005045 ORTHO05D006386 9.6e-54 213.4 140 80.0
ATR0561G148 Amborella trichopoda HOM05D005045 ORTHO05D006386 1.3e-53 213.0 140 80.7
FvH4_4g13300 Fragaria vesca HOM05D005045 ORTHO05D006386 1.3e-53 213.0 140 80.0
FAN17G1875 Fragaria x ananassa HOM05D005045 ORTHO05D006386 1.3e-53 213.0 140 80.0
FAN22G0494 Fragaria x ananassa HOM05D005045 ORTHO05D006386 1.3e-53 213.0 140 80.0
RcHm_v2.0_Chr4g0413591 Rosa chinensis HOM05D005045 ORTHO05D006386 1.3e-53 213.0 140 80.0
C03p21030 Brassica napus HOM05D005045 ORTHO05D006386 1.6e-53 212.6 149 76.5
BolC3t14484H Brassica oleracea HOM05D005045 ORTHO05D006386 1.6e-53 212.6 149 76.5
Prupe.1G165000 Prunus persica HOM05D005045 ORTHO05D006386 1.6e-53 212.6 140 80.0
Sc19g0007360 Simmondsia chinensis HOM05D005045 ORTHO05D006386 1.6e-53 212.6 140 80.0
ECA233G4939 Erigeron canadensis HOM05D005045 ORTHO05D006386 2.8e-53 211.8 140 80.0
MD05G1230300 Malus domestica HOM05D005045 ORTHO05D006386 3.6e-53 211.5 140 79.3
Medtr3g084300 Medicago truncatula HOM05D005045 ORTHO05D006386 3.6e-53 211.5 140 80.0
HanXRQChr02g0058481 Helianthus annuus HOM05D005045 ORTHO05D006386 6.2e-53 210.7 140 79.3
Lsat_1_v5_gn_6_59140 Lactuca sativa HOM05D005045 ORTHO05D006386 1.1e-52 209.9 140 79.3
Mapoly0027s0186 Marchantia polymorpha HOM05D005045 ORTHO05D006386 2.4e-52 208.8 140 77.1
BraA03t11060Z Brassica rapa HOM05D005045 ORTHO05D006386 4.0e-52 208.0 161 70.8
Os02g0497500 Oryza sativa ssp. japonica HOM05D005045 ORTHO05D006386 5.3e-52 207.6 140 79.3
unitig_0.g1961 Utricularia gibba HOM05D005045 ORTHO05D006386 1.2e-51 206.5 140 78.6
MBI07_g27365_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 2.6e-51 205.3 125 86.4
Pp3c10_3760 Physcomitrium patens HOM05D005045 ORTHO05D006386 5.8e-51 204.1 140 76.4
AagrBONN_evm.TU.Sc2ySwM_368.995 Anthoceros agrestis HOM05D002013 ORTHO05D002293 4.9e-50 201.1 140 76.4
SMO217G0009 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 3.0e-47 191.8 140 72.1
SMO356G0717 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 3.0e-47 191.8 140 72.1
Actinidia28996 Actinidia chinensis HOM05D005045 ORTHO05D006386 9.0e-44 180.3 142 71.1
FAN12G2321 Fragaria x ananassa HOM05D005045 ORTHO05D006386 2.0e-43 179.1 125 76.0
Cre03.g192550 Chlamydomonas reinhardtii HOM05D005045 ORTHO05D006386 4.2e-41 171.4 140 63.6
Actinidia11455 Actinidia chinensis HOM05D005045 ORTHO05D006386 4.6e-40 167.9 117 79.5
MCO01G132 Micromonas commoda HOM05D005045 ORTHO05D006386 6.7e-39 164.1 146 58.9
Nitab4.5_0002260g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 2.1e-37 159.1 107 80.4
PRCOL_00000463 Prasinoderma coloniale HOM05D005045 ORTHO05D006386 7.6e-35 150.6 144 56.9
SHI26076 Sapria himalayana HOM05D005045 ORTHO05D006386 7.1e-33 144.1 78 93.6
Actinidia11457 Actinidia chinensis HOM05D005045 ORTHO05D006386 6.0e-32 141.0 98 76.5
CBR_g44539 Chara braunii HOM05D005045 ORTHO05D006386 6.0e-32 141.0 107 71.0
FAN07G1455 Fragaria x ananassa HOM05D005045 ORTHO05D006386 1.0e-31 140.2 100 74.0
Lju912A1G33 Lonicera japonica HOM05D005045 ORTHO05D006386 2.6e-27 125.6 119 59.7
Cfa022909 Carpinus fangiana HOM05D005045 ORTHO05D006386 1.3e-26 123.2 130 53.1
Lsat_1_v5_gn_5_127521 Lactuca sativa HOM05D005045 ORTHO05D006386 1.6e-21 106.3 93 64.5
Lsat_1_v5_gn_2_13081 Lactuca sativa HOM05D005045 ORTHO05D006386 8.2e-13 77.4 59 67.8
Lsat_1_v5_gn_3_72140 Lactuca sativa HOM05D005045 ORTHO05D006386 7.7e-11 70.9 43 79.1


User provided reference genes

Program Settings