Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 4.2e-142 508.4 348 100.0
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 4.2e-134 481.9 349 84.8
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 1.7e-130 469.9 348 81.0
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 1.1e-126 457.2 348 85.9
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 5.5e-126 454.9 349 85.1
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 2.6e-123 446.0 349 82.8
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 3.4e-123 445.7 352 80.1
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 3.4e-123 445.7 352 80.1
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 8.3e-122 441.0 348 79.9
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 1.1e-121 440.7 349 84.5
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 5.4e-121 438.3 341 76.0
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 9.1e-121 437.6 347 79.3
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 1.2e-120 437.2 339 85.5
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 1.2e-120 437.2 358 76.3
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 5.9e-120 434.9 350 85.4
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.0e-119 434.1 342 76.6
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 1.9e-118 429.9 353 75.9
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 2.5e-118 429.5 348 77.9
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 3.2e-118 429.1 349 81.7
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 5.5e-118 428.3 347 78.4
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 1.6e-117 426.8 219 94.1
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 2.7e-117 426.0 219 94.5
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 2.7e-117 426.0 219 94.1
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 3.6e-117 425.6 219 93.6
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 3.6e-117 425.6 219 93.6
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 3.6e-117 425.6 313 84.7
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 3.6e-117 425.6 313 84.7
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 4.7e-117 425.2 348 79.3
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 6.1e-117 424.9 219 95.0
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 8.0e-117 424.5 219 93.6
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 8.0e-117 424.5 219 93.2
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 1.8e-116 423.3 363 77.1
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 3.0e-116 422.5 219 92.7
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 4.0e-116 422.2 348 75.6
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 5.2e-116 421.8 219 92.7
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 5.2e-116 421.8 219 94.1
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 6.8e-116 421.4 219 94.1
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 8.8e-116 421.0 219 93.2
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.2e-115 420.6 356 78.9
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 1.2e-115 420.6 219 92.7
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 1.2e-115 420.6 219 93.2
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 1.2e-115 420.6 219 92.7
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 1.5e-115 420.2 219 93.2
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 1.5e-115 420.2 217 94.0
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 2.0e-115 419.9 331 79.8
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 2.6e-115 419.5 219 93.2
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 3.4e-115 419.1 219 91.8
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 3.4e-115 419.1 348 82.2
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 4.4e-115 418.7 219 93.2
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 4.4e-115 418.7 348 80.2
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 4.4e-115 418.7 348 80.2
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 5.7e-115 418.3 347 82.1
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 7.5e-115 417.9 219 92.2
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 9.8e-115 417.5 219 92.7
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 9.8e-115 417.5 346 74.0
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 9.8e-115 417.5 350 77.1
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 1.3e-114 417.2 219 92.2
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 1.7e-114 416.8 219 92.7
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.7e-114 416.8 346 74.3
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 1.7e-114 416.8 219 91.3
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 2.2e-114 416.4 219 92.2
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 2.2e-114 416.4 219 91.3
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 2.8e-114 416.0 219 91.8
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 3.7e-114 415.6 219 92.2
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 3.7e-114 415.6 219 90.9
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 3.7e-114 415.6 348 79.9
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 3.7e-114 415.6 337 76.9
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 3.7e-114 415.6 333 75.4
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 2.4e-113 412.9 219 91.3
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 3.1e-113 412.5 333 75.4
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 3.1e-113 412.5 349 79.7
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 4.1e-113 412.1 219 90.4
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 5.4e-113 411.8 219 91.3
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 7.0e-113 411.4 219 90.4
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 1.6e-112 410.2 219 90.9
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 4.5e-112 408.7 222 91.4
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 4.5e-112 408.7 222 91.4
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 1.0e-111 407.5 397 69.5
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 1.0e-111 407.5 228 88.2
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 3.8e-111 405.6 216 89.8
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 5.0e-111 405.2 219 89.0
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 8.6e-111 404.4 426 62.2
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 1.1e-110 404.1 209 94.3
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 1.9e-110 403.3 217 91.2
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 2.5e-110 402.9 219 88.6
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 2.5e-110 402.9 219 88.6
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 5.6e-110 401.7 342 69.6
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 5.6e-110 401.7 214 90.7
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 2.1e-109 399.8 239 84.9
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 3.6e-109 399.1 219 87.2
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 3.6e-109 399.1 219 87.2
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 4.7e-109 398.7 219 87.2
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 4.7e-109 398.7 219 87.2
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 6.8e-108 394.8 219 86.8
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 9.8e-107 391.0 219 87.2
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 8.3e-106 387.9 219 85.4
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 1.4e-105 387.1 216 87.0
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 5.9e-104 381.7 304 84.9
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 1.0e-103 380.9 219 84.5
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 1.0e-103 380.9 219 82.6
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 5.0e-103 378.6 216 83.8
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 1.1e-102 377.5 208 89.9
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 1.1e-102 377.5 216 84.7
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 1.0e-100 370.9 219 82.6
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.3e-98 364.0 215 83.3
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 5.6e-94 348.6 214 80.4
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 4.1e-89 332.4 181 89.5
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 7.8e-88 328.2 342 54.7
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 9.5e-86 321.2 214 73.8
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 8.1e-85 318.2 208 73.6
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 6.8e-84 315.1 223 72.6
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 9.6e-78 294.7 155 91.6
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 2.0e-75 287.0 548 37.2
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 2.6e-75 286.6 219 63.9
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 1.4e-73 280.8 234 66.7
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 1.9e-73 280.4 219 66.7
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 7.1e-73 278.5 163 84.0
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 2.1e-72 276.9 207 71.0
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 3.5e-72 276.2 189 73.0
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 8.1e-69 265.0 138 92.8
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 3.9e-63 246.1 132 90.9
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.9e-63 246.1 218 86.7
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.2e-58 230.3 219 57.1
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 6.7e-55 218.8 241 73.0
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 1.5e-54 217.6 186 63.4
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 7.4e-54 215.3 240 67.1
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 3.1e-52 209.9 106 96.2
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 4.0e-52 209.5 108 94.4
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.2e-51 208.0 108 89.8
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 1.2e-51 208.0 106 96.2
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.1e-49 201.4 107 94.4
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 2.1e-48 197.2 102 91.2
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 1.3e-47 194.5 106 88.7
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 2.4e-44 183.7 92 95.7
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 2.2e-42 177.2 115 76.5
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 3.8e-42 176.4 95 91.6
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 3.2e-41 173.3 95 90.5
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 6.1e-40 169.1 86 90.7
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 2.2e-37 160.6 110 70.9
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 4.8e-37 159.5 85 88.2
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 1.6e-32 144.4 83 81.9
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 5.1e-31 139.4 71 93.0
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 5.1e-31 139.4 71 93.0
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 4.4e-30 136.3 199 55.8
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 4.4e-22 109.8 70 78.6
Psat1g060600 Pisum sativum HOM05D004689 ORTHO05D006269 1.4e-20 104.8 58 86.2
Pp3c4_2800 Physcomitrium patens HOM05D004689 ORTHO05D006269 5.0e-18 96.3 128 51.6
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 1.0e-10 72.0 170 59.4
Dinv44323 Davidia involucrata HOM05D004689 ORTHO05D183653 5.0e-10 69.7 38 89.5
Dinv25427 Davidia involucrata HOM05D004689 ORTHO05D182071 8.5e-10 68.9 38 86.8
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 1.5e-09 68.2 103 46.6
Dinv29092 Davidia involucrata HOM05D004689 ORTHO05D185927 5.2e-07 59.7 45 64.4
Haze_08899 Corylus avellana HOM05D004689 ORTHO05D165887 5.7e-06 56.2 167 64.1


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