Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003295g0070 Nicotiana tabacum HOM05D004007 ORTHO05D005127 8.3e-266 919.8 478 100.0
Peaxi162Scf00415g00213 Petunia axillaris HOM05D004007 ORTHO05D005127 1.8e-204 716.1 420 89.5
PGSC0003DMG400020149 Solanum tuberosum HOM05D004007 ORTHO05D005127 1.2e-200 703.4 424 86.6
CAN.G771.36 Capsicum annuum HOM05D004007 ORTHO05D005127 6.1e-200 701.0 424 86.3
Nitab4.5_0000917g0090 Nicotiana tabacum HOM05D004007 ORTHO05D005127 3.9e-199 698.4 441 84.1
Solyc06g083790.3 Solanum lycopersicum HOM05D004007 ORTHO05D005127 5.1e-199 698.0 424 86.1
Sopen06g035200 Solanum pennellii HOM05D004007 ORTHO05D005127 5.1e-199 698.0 424 86.1
Aqoxy2G03706 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 3.5e-195 685.3 412 85.9
Peaxi162Scf00013g01239 Petunia axillaris HOM05D004007 ORTHO05D005127 1.0e-194 683.7 425 84.5
Cc01_g18040 Coffea canephora HOM05D004007 ORTHO05D005127 1.7e-194 682.9 410 85.6
TWI18G0319 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 5.5e-193 677.9 412 84.2
THA.LOC104820071 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 1.6e-192 676.4 415 83.6
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla HOM05D004007 ORTHO05D005127 3.6e-192 675.2 420 83.1
Gohir.A07G150500 Gossypium hirsutum HOM05D004007 ORTHO05D005127 8.0e-192 674.1 411 83.9
Gohir.D07G157000 Gossypium hirsutum HOM05D004007 ORTHO05D005127 8.0e-192 674.1 428 81.5
TWI12G1332 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 8.0e-192 674.1 412 83.3
Nn3g19723 Nelumbo nucifera HOM05D004007 ORTHO05D005127 1.0e-191 673.7 412 83.7
Thecc.01G253900 Theobroma cacao HOM05D004007 ORTHO05D005127 1.8e-191 672.9 412 84.0
Potri.014G195700 Populus trichocarpa HOM05D004007 ORTHO05D005127 2.3e-191 672.5 412 83.0
Gorai.001G179900 Gossypium raimondii HOM05D004007 ORTHO05D005127 3.0e-191 672.2 411 83.7
Duzib211G0126 Durio zibethinus HOM05D004007 ORTHO05D005127 5.2e-191 671.4 412 83.7
TAR636G3081 Trochodendron aralioides HOM05D004007 ORTHO05D005127 6.7e-191 671.0 412 83.3
Atru.chr5.1778 Acer truncatum HOM05D004007 ORTHO05D005127 2.0e-190 669.5 412 82.8
GSVIVG01028373001 Vitis vinifera HOM05D004007 ORTHO05D005127 2.0e-190 669.5 410 82.9
COL.COLO4_34373 Corchorus olitorius HOM05D004007 ORTHO05D005127 2.6e-190 669.1 412 83.0
Thhalv10001996m.g Eutrema salsugineum HOM05D004007 ORTHO05D005127 3.3e-190 668.7 411 83.9
Gorai.001G180000 Gossypium raimondii HOM05D004007 ORTHO05D005127 4.4e-190 668.3 428 81.1
Gohir.D07G156900 Gossypium hirsutum HOM05D004007 ORTHO05D005127 5.7e-190 667.9 420 82.6
Oeu035732.1 Olea europaea HOM05D004007 ORTHO05D005127 7.5e-190 667.5 412 83.3
PSO832G3765 Papaver somniferum HOM05D004007 ORTHO05D005127 7.5e-190 667.5 392 86.2
Sabra14G0145900 Salix brachista HOM05D004007 ORTHO05D005127 7.5e-190 667.5 412 83.0
Duzib138G0603 Durio zibethinus HOM05D004007 ORTHO05D005127 9.7e-190 667.2 412 83.3
Actinidia09529 Actinidia chinensis HOM05D004007 ORTHO05D005127 1.3e-189 666.8 409 83.4
Ciclev10020300m.g Citrus clementina HOM05D004007 ORTHO05D005127 1.3e-189 666.8 412 82.8
Manes.13G037000 Manihot esculenta HOM05D004007 ORTHO05D005127 1.3e-189 666.8 412 82.8
Gohir.A07G150600 Gossypium hirsutum HOM05D004007 ORTHO05D005127 1.7e-189 666.4 411 83.2
CANSAT01G1551 Cannabis sativa HOM05D004007 ORTHO05D005127 2.2e-189 666.0 425 80.9
CiPaw.03G267900 Carya illinoinensis HOM05D004007 ORTHO05D005127 2.2e-189 666.0 409 82.6
PGR031G0590 Punica granatum HOM05D004007 ORTHO05D005127 2.2e-189 666.0 392 86.0
RcHm_v2.0_Chr6g0287371 Rosa chinensis HOM05D004007 ORTHO05D005127 2.2e-189 666.0 422 81.3
QL09p040238 Quercus lobata HOM05D004007 ORTHO05D005127 2.8e-189 665.6 409 82.9
PSO210G2341 Papaver somniferum HOM05D004007 ORTHO05D005127 3.7e-189 665.2 392 86.0
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea HOM05D004007 ORTHO05D005127 4.8e-189 664.8 389 85.9
BcaB07g31587 Brassica carinata HOM05D004007 ORTHO05D005127 6.3e-189 664.5 415 82.9
Lj1A71T65 Lonicera japonica HOM05D004007 ORTHO05D005127 6.3e-189 664.5 412 81.8
Potri.002G259600 Populus trichocarpa HOM05D004007 ORTHO05D005127 6.3e-189 664.5 412 83.0
AL3G53400 Arabidopsis lyrata HOM05D004007 ORTHO05D005127 1.1e-188 663.7 415 82.9
Sed0019801 Sechium edule HOM05D004007 ORTHO05D005127 1.1e-188 663.7 389 86.4
AT2G20420 Arabidopsis thaliana HOM05D004007 ORTHO05D005127 1.8e-188 662.9 415 82.4
DCAR_018503 Daucus carota HOM05D004007 ORTHO05D005127 1.8e-188 662.9 412 81.1
vmacro02694 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 1.8e-188 662.9 389 86.9
Carub.0003s3481 Capsella rubella HOM05D004007 ORTHO05D005127 2.4e-188 662.5 415 82.4
CARHR110970 Cardamine hirsuta HOM05D004007 ORTHO05D005127 3.1e-188 662.1 387 87.1
ClCG06G001530 Citrullus lanatus HOM05D004007 ORTHO05D005127 4.1e-188 661.8 409 82.9
MELO3C022382.2 Cucumis melo HOM05D004007 ORTHO05D005127 4.1e-188 661.8 409 82.9
CiPaw.04G188500 Carya illinoinensis HOM05D004007 ORTHO05D005127 5.3e-188 661.4 409 82.9
CsaV3_6G007490 Cucumis sativus L. HOM05D004007 ORTHO05D005127 5.3e-188 661.4 409 83.1
BcaB03g16833 Brassica carinata HOM05D004007 ORTHO05D005127 7.0e-188 661.0 412 83.3
A09p13930 Brassica napus HOM05D004007 ORTHO05D005127 7.0e-188 661.0 415 82.9
BraA09t37039Z Brassica rapa HOM05D004007 ORTHO05D005127 1.6e-187 659.8 415 82.7
Migut.N02218 Erythranthe guttata HOM05D004007 ORTHO05D005127 1.6e-187 659.8 412 82.0
Lj5g0009759 Lotus japonicus HOM05D004007 ORTHO05D005127 1.6e-187 659.8 389 85.9
Prupe.8G219400 Prunus persica HOM05D004007 ORTHO05D005127 1.6e-187 659.8 422 80.8
Aa31LG8G17390 Aethionema arabicum HOM05D004007 ORTHO05D005127 2.6e-187 659.1 392 85.2
FAN15G2391 Fragaria x ananassa HOM05D004007 ORTHO05D005127 2.6e-187 659.1 422 80.1
Sp3g33640 Schrenkiella parvula HOM05D004007 ORTHO05D005127 2.6e-187 659.1 412 82.0
Ca_09660_v3 Cicer arietinum L. HOM05D004007 ORTHO05D005127 3.5e-187 658.7 389 85.1
MD10G1179600 Malus domestica HOM05D004007 ORTHO05D005127 3.5e-187 658.7 409 83.4
C07p00650 Brassica napus HOM05D004007 ORTHO05D005127 4.5e-187 658.3 412 82.8
C09p16710 Brassica napus HOM05D004007 ORTHO05D005127 4.5e-187 658.3 414 82.6
BolC9t54570H Brassica oleracea HOM05D004007 ORTHO05D005127 4.5e-187 658.3 414 82.6
FvH4_2g20990 Fragaria vesca HOM05D004007 ORTHO05D005127 4.5e-187 658.3 422 80.1
Psat6g062440 Pisum sativum HOM05D004007 ORTHO05D005127 4.5e-187 658.3 423 79.7
HanXRQChr04g0111281 Helianthus annuus HOM05D004007 ORTHO05D005127 5.9e-187 657.9 409 83.1
Lsat_1_v5_gn_8_92300 Lactuca sativa HOM05D004007 ORTHO05D005127 5.9e-187 657.9 409 83.4
MD05G1193100 Malus domestica HOM05D004007 ORTHO05D005127 5.9e-187 657.9 422 80.8
Glyma.13G125400 Glycine max HOM05D004007 ORTHO05D005127 7.7e-187 657.5 389 84.6
BcaB08g34906 Brassica carinata HOM05D004007 ORTHO05D005127 1.0e-186 657.1 412 82.3
BcaC04g22683 Brassica carinata HOM05D004007 ORTHO05D005127 1.0e-186 657.1 415 82.4
TPR.G5690 Trifolium pratense HOM05D004007 ORTHO05D005127 1.7e-186 656.4 409 81.4
Eucgr.H00143 Eucalyptus grandis HOM05D004007 ORTHO05D005127 2.2e-186 656.0 408 82.1
Lalb_Chr06g0170611 Lupinus albus HOM05D004007 ORTHO05D005127 2.2e-186 656.0 422 79.6
BraA07t27822Z Brassica rapa HOM05D004007 ORTHO05D005127 2.9e-186 655.6 412 82.3
MSTRG.18338 Avicennia marina HOM05D004007 ORTHO05D005127 3.8e-186 655.2 412 80.6
Hund04389 Selenicereus undatus HOM05D004007 ORTHO05D005127 3.8e-186 655.2 422 79.4
Manes.12G034800 Manihot esculenta HOM05D004007 ORTHO05D005127 5.0e-186 654.8 412 81.1
HPP92_008549 Vanilla planifolia HOM05D004007 ORTHO05D005127 5.0e-186 654.8 411 80.8
Migut.D00454 Erythranthe guttata HOM05D004007 ORTHO05D005127 6.5e-186 654.4 392 83.9
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 6.5e-186 654.4 416 80.3
MSTRG.21476 Avicennia marina HOM05D004007 ORTHO05D005127 1.1e-185 653.7 412 81.1
A07p00310 Brassica napus HOM05D004007 ORTHO05D005127 1.1e-185 653.7 412 82.0
SEGI_32315 Sequoiadendron giganteum HOM05D004007 ORTHO05D005127 1.1e-185 653.7 388 84.3
BcaC06g36729 Brassica carinata HOM05D004007 ORTHO05D005127 1.5e-185 653.3 412 82.0
BolC7t40509H Brassica oleracea HOM05D004007 ORTHO05D005127 1.5e-185 653.3 412 82.0
HanXRQChr10g0280751 Helianthus annuus HOM05D004007 ORTHO05D005127 1.5e-185 653.3 425 79.8
Phvul.007G190800 Phaseolus vulgaris HOM05D004007 ORTHO05D005127 1.5e-185 653.3 389 83.5
VMungo0720G0501 Vigna mungo HOM05D004007 ORTHO05D005127 1.5e-185 653.3 389 83.3
Lalb_Chr02g0152651 Lupinus albus HOM05D004007 ORTHO05D005127 1.9e-185 652.9 422 79.4
CDE02G1941 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 2.5e-185 652.5 429 78.3
CDE05G0056 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 2.5e-185 652.5 412 80.3
EL10Ac6g15333 Beta vulgaris HOM05D004007 ORTHO05D005127 3.2e-185 652.1 392 83.9
CSS0014309 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 4.2e-185 651.7 415 81.2
Os02g0621700 Oryza sativa ssp. japonica HOM05D004007 ORTHO05D005127 5.5e-185 651.4 410 80.5
unitig_22.g5450 Utricularia gibba HOM05D004007 ORTHO05D005127 5.5e-185 651.4 416 79.8
Medtr1g069645 Medicago truncatula HOM05D004007 ORTHO05D005127 7.2e-185 651.0 412 80.1
SalBow6G2566 Salvia bowleyana HOM05D004007 ORTHO05D005127 9.4e-185 650.6 409 81.2
THA.LOC104804042 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 9.4e-185 650.6 409 81.7
AUR62017860 Chenopodium quinoa HOM05D004007 ORTHO05D005127 1.2e-184 650.2 392 84.2
Glyma.10G039000 Glycine max HOM05D004007 ORTHO05D005127 1.2e-184 650.2 389 83.5
AUR62003546 Chenopodium quinoa HOM05D004007 ORTHO05D005127 1.6e-184 649.8 389 84.6
Nn1g02862 Nelumbo nucifera HOM05D004007 ORTHO05D005127 1.6e-184 649.8 378 86.5
Zm00001eb247500 Zea mays HOM05D004007 ORTHO05D005127 2.1e-184 649.4 410 80.5
FAN24G2352 Fragaria x ananassa HOM05D004007 ORTHO05D005127 4.7e-184 648.3 437 77.3
Haze_24666 Corylus avellana HOM05D004007 ORTHO05D005127 6.1e-184 647.9 461 74.6
Haze_24671 Corylus avellana HOM05D004007 ORTHO05D005127 6.1e-184 647.9 461 74.6
Sabra02G0197500 Salix brachista HOM05D004007 ORTHO05D005127 8.0e-184 647.5 443 77.0
Rhsim01G0261700 Rhododendron simsii HOM05D004007 ORTHO05D005127 6.8e-183 644.4 432 78.0
Rhsim13G0038000 Rhododendron simsii HOM05D004007 ORTHO05D005127 8.8e-183 644.0 418 80.9
Zm00001eb185030 Zea mays HOM05D004007 ORTHO05D005127 1.2e-182 643.7 410 80.0
FAN27G2583 Fragaria x ananassa HOM05D004007 ORTHO05D005127 2.6e-182 642.5 431 78.2
Nitab4.5_0001919g0010 Nicotiana tabacum HOM05D004007 ORTHO05D005127 7.5e-182 641.0 424 81.1
Lsat_1_v5_gn_9_10741 Lactuca sativa HOM05D004007 ORTHO05D005127 2.7e-179 632.5 409 81.2
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea HOM05D004007 ORTHO05D005127 2.9e-178 629.0 446 74.7
FAN20G1240 Fragaria x ananassa HOM05D004007 ORTHO05D005127 7.5e-174 614.4 472 70.8
SalBow4G2771 Salvia bowleyana HOM05D004007 ORTHO05D005127 1.1e-172 610.5 422 75.6
Mapoly0005s0186 Marchantia polymorpha HOM05D004007 ORTHO05D005127 7.0e-172 607.8 389 78.4
SMO201G0240 Selaginella moellendorffii HOM05D004007 ORTHO05D005127 8.6e-170 600.9 391 77.2
Dinv16374 Davidia involucrata HOM05D004007 ORTHO05D005127 1.9e-169 599.7 364 83.8
MBI07_g32831_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 3.0e-167 592.4 390 80.5
Sc16g0004880 Simmondsia chinensis HOM05D004007 ORTHO05D005127 3.7e-165 585.5 368 80.2
ATR0736G150 Amborella trichopoda HOM05D004007 ORTHO05D005127 7.0e-164 581.3 363 80.7
Pp3c20_5640 Physcomitrium patens HOM05D004007 ORTHO05D005127 5.9e-163 578.2 412 70.9
MBI10_g27626_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 2.3e-162 576.2 411 74.0
CBR_g26489 Chara braunii HOM05D004007 ORTHO05D005127 1.6e-160 570.1 387 72.4
Actinidia25803 Actinidia chinensis HOM05D004007 ORTHO05D005127 7.0e-156 554.7 309 90.9
Oeu055792.1 Olea europaea HOM05D004007 ORTHO05D005127 7.3e-153 544.7 412 70.9
Dinv34652 Davidia involucrata HOM05D004007 ORTHO05D005127 1.7e-146 523.5 324 81.5
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 1.2e-144 517.3 391 66.2
MCO01G516 Micromonas commoda HOM05D004007 ORTHO05D005127 5.8e-142 508.4 389 67.4
Cre17.g703700 Chlamydomonas reinhardtii HOM05D004007 ORTHO05D005127 1.7e-141 506.9 391 65.7
ECA236G0129 Erigeron canadensis HOM05D004007 ORTHO05D005127 1.2e-136 490.7 277 90.6
vmacro14809 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 4.4e-134 482.3 494 57.5
QL09p040223 Quercus lobata HOM05D004007 ORTHO05D005127 3.1e-127 459.5 392 66.6
Ah.03g147720 Amaranthus hybridus HOM05D004007 ORTHO05D005127 1.2e-126 457.6 260 89.2
MBI07_g31081_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.7e-117 427.2 259 81.5
MBI10_g13790_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 2.2e-117 426.8 242 89.7
Lalb_Chr21g0314021 Lupinus albus HOM05D004007 ORTHO05D005127 6.3e-96 355.5 205 86.8
MBI10_g27857_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 5.9e-94 349.0 255 69.8
Cpa.g.sc165.35 Carica papaya HOM05D004007 ORTHO05D005127 1.4e-90 337.8 227 73.1
TAR365G0842 Trochodendron aralioides HOM05D004007 ORTHO05D005127 1.3e-85 321.2 215 74.4
Sed0026875 Sechium edule HOM05D004007 ORTHO05D005127 8.8e-74 282.0 269 57.6
Haze_27401 Corylus avellana HOM05D004007 ORTHO05D005127 5.7e-73 279.3 293 50.9
Psat3g074720 Pisum sativum HOM05D004007 ORTHO05D005127 5.0e-69 266.2 207 67.6
Psat7g041920 Pisum sativum HOM05D004007 ORTHO05D005127 1.4e-63 248.1 147 82.3
Haze_26747 Corylus avellana HOM05D004007 ORTHO05D005127 1.0e-58 231.9 189 60.8
Actinidia30141 Actinidia chinensis HOM05D004007 ORTHO05D002753 1.5e-49 201.4 194 62.9
TAR365G0472 Trochodendron aralioides HOM05D004007 ORTHO05D022233 7.8e-46 189.1 113 90.3
Zm00001eb283930 Zea mays HOM05D004007 ORTHO05D005127 4.9e-40 169.9 130 62.3
Cfa021785 Carpinus fangiana HOM05D001982 ORTHO05D003938 1.3e-37 161.8 289 36.3
Lj2C1145T6 Lonicera japonica HOM05D004007 ORTHO05D022233 8.6e-37 159.1 157 61.8
Lj2C1146T3 Lonicera japonica HOM05D004007 ORTHO05D022233 1.1e-36 158.7 157 61.1
Zm00001eb277730 Zea mays HOM05D004007 ORTHO05D005127 1.7e-32 144.8 124 58.1
Aqoxy7G03385 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 4.3e-28 130.2 99 71.7
Haze_26746 Corylus avellana HOM05D004007 ORTHO05D005127 1.5e-25 121.7 173 37.6
Dinv08643 Davidia involucrata HOM05D004007 ORTHO05D005127 8.6e-21 105.9 99 57.6
Lj2A1145G31 Lonicera japonica HOM05D004007 ORTHO05D005127 8.6e-21 105.9 129 48.8
CiPaw.03G130300 Carya illinoinensis HOM05D004007 ORTHO05D005127 1.2e-19 102.1 69 71.0
Cpa.g.sc165.34 Carica papaya HOM05D004007 ORTHO05D022233 4.6e-14 83.6 49 91.8
FvH4_2g21030 Fragaria vesca HOM05D004007 ORTHO05D022233 1.3e-13 82.0 49 87.8
Haze_26311 Corylus avellana HOM05D002944 ORTHO05D003377 1.6e-11 75.1 367 28.1
Lalb_Chr21g0314011 Lupinus albus HOM05D004007 ORTHO05D022233 2.1e-11 74.7 40 95.0
CSS0040446 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 4.8e-11 73.6 92 44.6
Glyma.18G157500 Glycine max HOM05D004007 ORTHO05D005127 2.2e-08 64.7 37 81.1
Cfa022239 Carpinus fangiana HOM05D002061 ORTHO05D121718 5.4e-07 60.1 327 23.5
MELO3C010675.2 Cucumis melo HOM05D002061 ORTHO05D002849 1.2e-06 58.9 364 23.6
CsaV3_2G024770 Cucumis sativus L. HOM05D002061 ORTHO05D002849 1.2e-06 58.9 364 23.6
Aqoxy3G01074 Aquilegia oxysepala HOM05D002061 ORTHO05D002849 2.1e-06 58.2 361 24.4
ClCG08G017860 Citrullus lanatus HOM05D002061 ORTHO05D005707 4.6e-06 57.0 364 23.4
Sed0025966 Sechium edule HOM05D002061 ORTHO05D005707 7.9e-06 56.2 360 23.9


User provided reference genes

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