Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 9.6e-286 986.1 485 100.0
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 3.7e-261 904.4 471 94.7
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 4.8e-245 850.9 472 88.1
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.6e-243 845.9 472 87.7
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 5.0e-242 840.9 472 86.7
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 2.1e-240 835.5 468 87.2
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 2.9e-234 815.1 478 84.5
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 9.2e-196 687.2 476 70.0
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.0e-194 683.7 476 69.7
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 8.1e-192 674.1 473 70.0
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 3.1e-191 672.2 470 69.6
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 5.8e-190 667.9 477 69.0
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 1.7e-189 666.4 478 69.5
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 2.4e-188 662.5 472 68.0
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 1.2e-187 660.2 491 67.0
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 4.6e-187 658.3 485 67.4
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 6.0e-187 657.9 477 67.5
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 3.9e-186 655.2 470 68.1
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 6.6e-186 654.4 474 66.7
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 1.5e-185 653.3 476 67.0
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 1.9e-185 652.9 471 69.0
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 5.6e-185 651.4 477 67.1
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 2.1e-184 649.4 474 67.9
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 2.8e-184 649.0 478 68.0
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 2.8e-184 649.0 478 67.2
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 8.1e-184 647.5 472 67.2
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 1.4e-183 646.7 481 66.7
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 2.4e-183 646.0 478 66.9
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 6.9e-183 644.4 467 67.0
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 2.6e-182 642.5 483 65.6
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 7.6e-182 641.0 467 66.8
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 2.2e-181 639.4 467 67.2
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 3.2e-180 635.6 472 66.3
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 5.4e-180 634.8 483 64.2
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 7.1e-180 634.4 479 65.8
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.2e-179 633.6 476 65.8
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 1.2e-179 633.6 478 65.9
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 1.6e-179 633.3 473 65.8
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 2.7e-179 632.5 476 66.2
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 2.7e-179 632.5 472 66.3
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 3.5e-179 632.1 471 66.7
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 1.0e-178 630.6 472 66.5
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 1.0e-178 630.6 473 66.2
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 6.6e-178 627.9 472 66.3
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 1.9e-177 626.3 476 64.3
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 2.5e-177 625.9 469 64.8
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 8.1e-176 620.9 471 65.8
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 6.9e-175 617.8 472 64.8
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 6.9e-175 617.8 485 65.8
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.2e-174 617.1 496 65.5
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 1.5e-174 616.7 472 66.1
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 4.5e-174 615.1 483 62.1
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 4.5e-174 615.1 469 64.6
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 1.3e-173 613.6 480 61.9
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 1.7e-173 613.2 469 64.0
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 2.2e-173 612.8 483 61.3
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 8.4e-173 610.9 487 61.8
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 1.9e-172 609.8 483 61.9
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 2.4e-172 609.4 485 61.0
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 3.2e-172 609.0 481 62.6
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 9.3e-172 607.4 472 64.6
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 2.1e-171 606.3 472 63.6
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 3.5e-171 605.5 469 64.6
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 3.5e-171 605.5 485 61.6
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 6.0e-171 604.7 485 61.4
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 6.0e-171 604.7 483 61.5
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 7.9e-171 604.4 485 61.4
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.0e-170 604.0 478 63.2
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 1.3e-170 603.6 467 64.0
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 1.3e-170 603.6 475 64.4
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 1.8e-170 603.2 473 64.3
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 1.9e-169 599.7 483 61.7
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 2.8e-168 595.9 473 64.1
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 1.8e-167 593.2 470 63.8
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 3.0e-162 575.9 474 62.0
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 6.9e-159 564.7 472 60.6
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 4.5e-158 562.0 423 63.4
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 2.2e-157 559.7 442 65.2
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 8.4e-157 557.8 424 63.4
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 1.4e-156 557.0 492 59.6
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 3.5e-155 552.4 476 58.6
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 3.6e-147 525.8 372 68.3
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 9.7e-145 517.7 385 64.2
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 2.0e-137 493.4 319 74.6
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 3.6e-131 472.6 459 52.5
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 6.7e-130 468.4 382 61.3
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 5.7e-129 465.3 338 66.6
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 6.1e-123 445.3 442 49.5
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 6.1e-123 445.3 316 67.7
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 2.5e-116 423.3 475 46.3
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 1.7e-104 384.0 425 47.3
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.6e-99 367.5 255 70.6
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 1.1e-95 354.8 388 45.1
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 2.7e-94 350.1 429 44.8
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 7.8e-94 348.6 381 44.6
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 5.6e-92 342.4 257 64.2
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.5e-89 334.3 361 47.6
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 7.5e-89 332.0 319 55.2
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 1.7e-88 330.9 269 62.1
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.7e-88 330.9 299 56.9
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.6e-86 324.3 274 60.2
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 3.0e-85 320.1 395 41.8
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 3.3e-84 316.6 444 41.2
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 5.6e-84 315.8 239 63.6
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.6e-75 287.7 219 61.2
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 3.2e-71 273.5 243 58.8
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 1.1e-63 248.4 201 62.2
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 3.0e-61 240.4 236 53.4
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 2.0e-57 227.6 174 61.5
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 5.1e-53 213.0 184 59.8
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 8.1e-51 205.7 116 87.9
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 1.2e-49 201.8 118 80.5
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 8.4e-48 195.7 118 78.8
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 3.8e-40 170.2 99 86.9
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 4.8e-27 126.7 108 59.3
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 5.0e-24 116.7 117 52.1
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 1.9e-07 61.6 44 63.6
Actinidia26749 Actinidia chinensis HOM05D006543 ORTHO05D008308 4.2e-07 60.5 48 62.5
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 9.4e-07 59.3 52 53.8
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 9.4e-07 59.3 52 53.8
MD06G1157100 Malus domestica HOM05D006543 ORTHO05D008308 1.2e-06 58.9 70 44.3
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 3.6e-06 57.4 66 43.9


User provided reference genes

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