Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003010g0050 Nicotiana tabacum HOM05D004901 ORTHO05D005592 8.8e-159 563.5 278 100.0
CAN.G259.2 Capsicum annuum HOM05D004901 ORTHO05D005592 1.9e-108 396.4 244 83.2
Nitab4.5_0000167g0300 Nicotiana tabacum HOM05D004901 ORTHO05D005592 6.0e-107 391.3 238 83.2
Sopen11g010870 Solanum pennellii HOM05D004901 ORTHO05D005592 2.1e-104 382.9 244 81.6
Peaxi162Scf00391g00530 Petunia axillaris HOM05D004901 ORTHO05D005592 9.9e-102 374.0 274 73.0
Migut.C01287 Erythranthe guttata HOM05D004901 ORTHO05D005592 2.0e-70 270.0 267 58.4
Oeu021225.1 Olea europaea HOM05D004901 ORTHO05D005592 2.9e-69 266.2 256 60.9
CSS0009856 Camellia sinensis var. sinensis HOM05D004901 ORTHO05D005592 8.5e-69 264.6 253 58.5
SGA_v2.0_scaffold24G10583 Striga asiatica HOM05D004901 ORTHO05D005592 3.2e-68 262.7 272 57.7
AL1G50380 Arabidopsis lyrata HOM05D004901 ORTHO05D005592 6.1e-67 258.5 244 61.1
Ciclev10000033m.g Citrus clementina HOM05D004901 ORTHO05D005592 3.3e-65 252.7 244 57.4
Dinv02587 Davidia involucrata HOM05D004901 ORTHO05D005592 2.8e-64 249.6 248 58.5
vmacro00754 Vaccinium macrocarpon HOM05D004901 ORTHO05D005592 2.8e-64 249.6 232 59.9
Atru.chr13.2409 Acer truncatum HOM05D004901 ORTHO05D005592 3.7e-64 249.2 252 56.7
Carub.0001s3315 Capsella rubella HOM05D004901 ORTHO05D005592 1.1e-63 247.7 243 58.8
Aqoxy6G00145 Aquilegia oxysepala HOM05D004901 ORTHO05D005592 1.4e-63 247.3 263 52.1
MD15G1404400 Malus domestica HOM05D004901 ORTHO05D005592 1.4e-63 247.3 248 56.5
Manes.18G103400 Manihot esculenta HOM05D004901 ORTHO05D005592 1.8e-63 246.9 245 54.3
AT1G35530 Arabidopsis thaliana HOM05D004901 ORTHO05D005592 4.1e-63 245.7 242 58.7
Thhalv10002370m.g Eutrema salsugineum HOM05D004901 ORTHO05D005592 5.3e-63 245.4 235 58.7
Cfa008133 Carpinus fangiana HOM05D004901 ORTHO05D005592 6.9e-63 245.0 247 56.7
Sp1g30300 Schrenkiella parvula HOM05D004901 ORTHO05D005592 1.2e-62 244.2 235 59.1
AUR62004624 Chenopodium quinoa HOM05D004901 ORTHO05D005592 2.6e-62 243.0 247 54.7
DCAR_011526 Daucus carota HOM05D004901 ORTHO05D005592 2.6e-62 243.0 241 55.2
FAN03G3444 Fragaria x ananassa HOM05D004901 ORTHO05D005592 2.6e-62 243.0 244 55.7
Gorai.013G139300 Gossypium raimondii HOM05D004901 ORTHO05D005592 3.4e-62 242.7 248 56.0
Hund16786 Selenicereus undatus HOM05D004901 ORTHO05D005592 3.4e-62 242.7 238 57.6
TAR628G1246 Trochodendron aralioides HOM05D004901 ORTHO05D005592 3.4e-62 242.7 242 58.3
Aa31LG6G8790 Aethionema arabicum HOM05D004901 ORTHO05D005592 7.7e-62 241.5 244 57.0
Gohir.D13G124700 Gossypium hirsutum HOM05D004901 ORTHO05D005592 7.7e-62 241.5 248 55.6
Haze_13904 Corylus avellana HOM05D004901 ORTHO05D005592 1.3e-61 240.7 249 55.8
Thecc.08G186400 Theobroma cacao HOM05D004901 ORTHO05D005592 1.3e-61 240.7 250 56.0
SalBow7G4726 Salvia bowleyana HOM05D004901 ORTHO05D005592 1.7e-61 240.4 247 57.1
Lsat_1_v5_gn_8_141780 Lactuca sativa HOM05D004901 ORTHO05D005592 2.2e-61 240.0 238 56.3
BcaC05g27729 Brassica carinata HOM05D004901 ORTHO05D005592 2.9e-61 239.6 228 59.2
BolC5t32466H Brassica oleracea HOM05D004901 ORTHO05D005592 2.9e-61 239.6 228 59.2
Eucgr.F02585 Eucalyptus grandis HOM05D004901 ORTHO05D005592 2.9e-61 239.6 252 54.8
FAN06G0910 Fragaria x ananassa HOM05D004901 ORTHO05D005592 3.8e-61 239.2 243 54.3
C05p37130 Brassica napus HOM05D004901 ORTHO05D005592 6.5e-61 238.4 224 59.8
ClCG11G008690 Citrullus lanatus HOM05D004901 ORTHO05D005592 8.5e-61 238.0 250 57.2
Rhsim11G0056200 Rhododendron simsii HOM05D004901 ORTHO05D005592 1.1e-60 237.7 234 59.0
CiPaw.03G019200 Carya illinoinensis HOM05D004901 ORTHO05D005592 1.4e-60 237.3 243 56.0
MELO3C008073.2 Cucumis melo HOM05D004901 ORTHO05D005592 2.5e-60 236.5 241 56.4
THA.LOC104816395 Tarenaya hassleriana HOM05D004901 ORTHO05D005592 3.2e-60 236.1 247 55.9
BraA05t21240Z Brassica rapa HOM05D004901 ORTHO05D005592 4.2e-60 235.7 228 58.3
CsaV3_2G033030 Cucumis sativus L. HOM05D004901 ORTHO05D005592 4.2e-60 235.7 237 56.5
Nn5g27609 Nelumbo nucifera HOM05D004901 ORTHO05D005592 5.5e-60 235.3 242 56.2
Cc00_g06540 Coffea canephora HOM05D004901 ORTHO05D005592 7.2e-60 235.0 223 60.1
ECA233G3640 Erigeron canadensis HOM05D004901 ORTHO05D000001 7.2e-60 235.0 249 56.2
Ah.04g162840 Amaranthus hybridus HOM05D004901 ORTHO05D005592 9.4e-60 234.6 239 54.8
Sabra13G0094500 Salix brachista HOM05D004901 ORTHO05D005592 1.2e-59 234.2 242 55.4
EL10Ac1g00109 Beta vulgaris HOM05D004901 ORTHO05D005592 2.1e-59 233.4 254 53.9
CANSAT56G0037 Cannabis sativa HOM05D004901 ORTHO05D005592 2.1e-59 233.4 243 55.6
Sc23g0001380 Simmondsia chinensis HOM05D004901 ORTHO05D005592 2.7e-59 233.0 239 57.3
SHI09022 Sapria himalayana HOM05D004901 ORTHO05D005592 3.6e-59 232.6 239 53.6
GSVIVG01034779001 Vitis vinifera HOM05D004901 ORTHO05D005592 1.0e-58 231.1 239 56.1
HanXRQChr17g0559191 Helianthus annuus HOM05D004901 ORTHO05D005592 1.8e-58 230.3 230 57.4
PGR042G2824 Punica granatum HOM05D004901 ORTHO05D005592 3.9e-58 229.2 253 53.8
Prupe.1G551100 Prunus persica HOM05D004901 ORTHO05D005592 5.1e-58 228.8 248 54.0
FvH4_7g03750 Fragaria vesca HOM05D004901 ORTHO05D005592 8.8e-58 228.0 245 53.1
PSO170G4536 Papaver somniferum HOM05D004901 ORTHO05D005592 1.1e-57 227.6 246 52.8
arahy.Tifrunner.gnm1.ann1.CA6GZM Arachis hypogaea HOM05D004901 ORTHO05D005592 2.6e-57 226.5 239 53.1
Sed0000511 Sechium edule HOM05D004901 ORTHO05D005592 2.6e-57 226.5 245 54.7
Psat0s1585g0040 Pisum sativum HOM05D004901 ORTHO05D005592 3.3e-57 226.1 235 53.2
arahy.Tifrunner.gnm1.ann1.0Z9JWZ Arachis hypogaea HOM05D004901 ORTHO05D005592 5.7e-57 225.3 241 52.3
HPP92_004437 Vanilla planifolia HOM05D004901 ORTHO05D005592 5.7e-57 225.3 242 52.9
Glyma.08G238200 Glycine max HOM05D004901 ORTHO05D005592 7.4e-57 224.9 231 55.4
Medtr1g103260 Medicago truncatula HOM05D004901 ORTHO05D005592 1.3e-56 224.2 228 55.3
PSO782G5557 Papaver somniferum HOM05D004901 ORTHO05D005592 1.7e-56 223.8 256 51.6
BcaB03g13661 Brassica carinata HOM05D004901 ORTHO05D005592 2.2e-56 223.4 230 57.4
QL09p004928 Quercus lobata HOM05D004901 ORTHO05D005592 3.7e-56 222.6 249 53.0
Thhalv10001810m.g Eutrema salsugineum HOM05D004901 ORTHO05D005592 4.8e-56 222.2 153 74.5
A05p23720 Brassica napus HOM05D004901 ORTHO05D005592 6.3e-56 221.9 245 53.9
Potri.013G110200 Populus trichocarpa HOM05D004901 ORTHO05D005592 1.1e-55 221.1 263 51.0
RcHm_v2.0_Chr7g0228881 Rosa chinensis HOM05D004901 ORTHO05D005592 1.1e-55 221.1 176 63.6
Phvul.011G000500 Phaseolus vulgaris HOM05D004901 ORTHO05D005592 1.4e-55 220.7 233 53.6
Lj3g0009157 Lotus japonicus HOM05D004901 ORTHO05D005592 5.3e-55 218.8 236 53.4
TPR.G26106 Trifolium pratense HOM05D004901 ORTHO05D005592 2.0e-54 216.9 240 50.8
Gohir.A13G120700 Gossypium hirsutum HOM05D004901 ORTHO05D005592 3.5e-54 216.1 132 77.3
ATR0749G100 Amborella trichopoda HOM05D004901 ORTHO05D005592 4.5e-54 215.7 179 64.2
VMungo1127G0411 Vigna mungo HOM05D004901 ORTHO05D005592 5.9e-54 215.3 231 54.1
COL.COLO4_12801 Corchorus olitorius HOM05D004901 ORTHO05D005592 1.9e-52 210.3 280 47.5
AUR62023519 Chenopodium quinoa HOM05D004901 ORTHO05D005592 4.2e-52 209.1 244 50.0
Lalb_Chr01g0000031 Lupinus albus HOM05D004901 ORTHO05D005592 2.1e-51 206.8 134 72.4
AagrBONN_evm.TU.Sc2ySwM_228.534 Anthoceros agrestis HOM05D004901 ORTHO05D005592 1.1e-49 201.1 230 48.7
unitig_747.g21475 Utricularia gibba HOM05D004901 ORTHO05D005592 1.1e-49 201.1 237 48.9
Os11g0180600 Oryza sativa ssp. japonica HOM05D004901 ORTHO05D005592 3.7e-48 196.1 132 68.9
Pp3c20_9530 Physcomitrium patens HOM05D004901 ORTHO05D005592 2.4e-47 193.4 127 70.1
Mapoly0001s0472 Marchantia polymorpha HOM05D004901 ORTHO05D005592 7.0e-47 191.8 129 69.0
Zm00001eb201140 Zea mays HOM05D004901 ORTHO05D005592 2.9e-45 186.4 129 66.7
Cpa.g.sc66.25 Carica papaya HOM05D004901 ORTHO05D005592 2.5e-44 183.3 207 53.1
MBI17_g46833_MAGBIO Magnolia biondii HOM05D004901 ORTHO05D005592 2.5e-44 183.3 120 75.0
AL1G60360 Arabidopsis lyrata HOM05D004901 ORTHO05D005592 9.4e-44 181.4 202 54.5
MBI17_g38773_MAGBIO Magnolia biondii HOM05D004901 ORTHO05D005592 5.0e-37 159.1 193 51.3
Haze_26138 Corylus avellana HOM05D004901 ORTHO05D005592 2.1e-35 153.7 126 54.0
MCO11G659 Micromonas commoda HOM05D004901 ORTHO05D005592 5.7e-33 145.6 183 44.3
Cre03.g208833 Chlamydomonas reinhardtii HOM05D004901 ORTHO05D005592 2.7e-30 136.7 132 50.0
PRCOL_00002915 Prasinoderma coloniale HOM05D004901 ORTHO05D005592 7.7e-30 135.2 126 49.2
Zm00001eb384980 Zea mays HOM05D004901 ORTHO05D005592 7.7e-30 135.2 88 68.2
Duzib177G1004 Durio zibethinus HOM05D004901 ORTHO05D005592 2.9e-29 133.3 176 48.9
FAN01G2229 Fragaria x ananassa HOM05D004901 ORTHO05D005592 5.5e-28 129.0 187 43.9
GSVIVG01012489001 Vitis vinifera HOM05D004901 ORTHO05D005592 4.4e-25 119.4 139 50.4
CDE04G3479 Ceratophyllum demersum HOM05D004901 ORTHO05D005592 3.2e-23 113.2 63 84.1
SEGI_09674 Sequoiadendron giganteum HOM05D004901 ORTHO05D005592 1.7e-21 107.5 68 72.1
Potri.013G109600 Populus trichocarpa HOM05D004901 ORTHO05D005592 2.9e-21 106.7 69 72.5
FAN18G0186 Fragaria x ananassa HOM05D004901 ORTHO05D005592 9.2e-15 85.1 164 37.8
Duzib177G0087 Durio zibethinus HOM05D004901 ORTHO05D005592 3.9e-13 79.7 57 64.9
C02p24690 Brassica napus HOM05D004901 ORTHO05D005592 1.2e-11 74.7 89 51.7
AagrBONN_evm.TU.Sc2ySwM_117.732 Anthoceros agrestis HOM05D000399 ORTHO05D000304 2.4e-07 60.5 111 36.9
RcHm_v2.0_Chr1g0331411 Rosa chinensis HOM05D056176 ORTHO05D005592 3.2e-07 60.1 44 70.5
PSO832G3766 Papaver somniferum HOM05D000399 ORTHO05D000304 4.1e-07 59.7 115 33.9
Lsat_1_v5_gn_3_21180 Lactuca sativa HOM05D004901 ORTHO05D005592 5.4e-07 59.3 143 36.4
Os04g0509300 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 5.4e-07 59.3 181 27.6


User provided reference genes

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