Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002960g0020 Nicotiana tabacum HOM05D003939 ORTHO05D013368 2.5e-40 168.3 85 100.0
Nitab4.5_0001637g0020 Nicotiana tabacum HOM05D003939 ORTHO05D013368 6.0e-34 147.1 79 93.7
Solyc03g059400.1 Solanum lycopersicum HOM05D003939 ORTHO05D013368 3.8e-28 127.9 80 83.8
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 3.8e-28 127.9 80 82.5
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 2.4e-27 125.2 75 85.3
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.9e-24 115.5 76 77.6
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 9.6e-24 113.2 76 75.0
Hma1.2p1_0481F.1_g162040 Hydrangea macrophylla HOM05D003939 ORTHO05D013368 1.3e-23 112.8 76 73.7
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 1.1e-22 109.8 74 75.7
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 1.8e-22 109.0 74 74.3
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 3.1e-22 108.2 77 74.0
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 9.0e-22 106.7 76 72.4
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 2.6e-21 105.1 75 70.7
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 2.2e-20 102.1 74 70.3
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 2.2e-20 102.1 84 59.5
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 2.9e-20 101.7 75 70.7
TAR371G1006 Trochodendron aralioides HOM05D003939 ORTHO05D005979 6.5e-20 100.5 65 76.9
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 1.4e-19 99.4 68 72.1
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.5e-19 98.6 68 69.1
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.5e-19 98.6 71 67.6
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 2.5e-19 98.6 76 65.8
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 2.5e-19 98.6 83 60.2
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 3.2e-19 98.2 74 67.6
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 3.2e-19 98.2 72 69.4
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 4.2e-19 97.8 75 64.0
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 7.1e-19 97.1 73 67.1
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 7.1e-19 97.1 75 69.3
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 1.2e-18 96.3 81 61.7
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 2.1e-18 95.5 73 63.0
CiPaw.03G089600 Carya illinoinensis HOM05D003939 ORTHO05D005979 3.5e-18 94.7 71 67.6
Atru.chr8.420 Acer truncatum HOM05D003939 ORTHO05D013368 4.6e-18 94.4 86 57.0
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 6.0e-18 94.0 71 67.6
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 7.9e-18 93.6 77 62.3
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 7.9e-18 93.6 71 67.6
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 1.0e-17 93.2 85 63.5
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 1.8e-17 92.4 76 63.2
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 1.8e-17 92.4 84 58.3
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 2.3e-17 92.0 83 61.4
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 3.0e-17 91.7 68 67.6
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 3.0e-17 91.7 94 56.4
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 3.9e-17 91.3 70 67.1
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 3.9e-17 91.3 72 68.1
Gohir.1Z049344 Gossypium hirsutum HOM05D003939 ORTHO05D005979 5.1e-17 90.9 70 67.1
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 5.1e-17 90.9 70 67.1
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 6.7e-17 90.5 68 66.2
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 8.7e-17 90.1 68 72.1
Glyma.19G029100 Glycine max HOM05D003939 ORTHO05D005979 8.7e-17 90.1 68 72.1
ClCG07G007370 Citrullus lanatus HOM05D003939 ORTHO05D005979 1.5e-16 89.4 79 60.8
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 1.9e-16 89.0 71 64.8
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 1.9e-16 89.0 69 71.0
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 1.9e-16 89.0 81 56.8
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 1.9e-16 89.0 68 72.1
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 2.5e-16 88.6 68 66.2
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 2.5e-16 88.6 68 66.2
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 2.5e-16 88.6 74 64.9
Oeu007060.1 Olea europaea HOM05D003939 ORTHO05D005979 2.5e-16 88.6 76 67.1
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 3.3e-16 88.2 76 63.2
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 4.3e-16 87.8 71 63.4
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 7.4e-16 87.0 74 62.2
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 7.4e-16 87.0 80 63.8
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 7.4e-16 87.0 78 65.4
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 9.7e-16 86.7 78 65.4
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 9.7e-16 86.7 79 63.3
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 1.3e-15 86.3 78 65.4
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.3e-15 86.3 79 68.4
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 1.3e-15 86.3 82 65.9
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.8e-15 85.1 79 57.0
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 2.8e-15 85.1 70 60.0
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 2.8e-15 85.1 77 66.2
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 4.8e-15 84.3 71 70.4
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 5.3e-14 80.9 83 54.2
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 6.9e-14 80.5 68 61.8
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 9.0e-14 80.1 81 54.3
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 1.5e-13 79.3 73 54.8
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 2.6e-13 78.6 72 61.1
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 4.5e-13 77.8 80 52.5
C09p61560 Brassica napus HOM05D003939 ORTHO05D013368 1.7e-12 75.9 73 53.4
BolC9t58995H Brassica oleracea HOM05D003939 ORTHO05D013368 1.7e-12 75.9 73 53.4
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 2.2e-12 75.5 72 54.2
ATR0035G002 Amborella trichopoda HOM05D003939 ORTHO05D013368 2.9e-12 75.1 64 54.7
ATR1045G001 Amborella trichopoda HOM05D003939 ORTHO05D013368 2.9e-12 75.1 64 54.7
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 2.9e-12 75.1 72 54.2
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 2.9e-12 75.1 80 51.2
ATR0064G012 Amborella trichopoda HOM05D003939 ORTHO05D013368 3.8e-12 74.7 66 53.0
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 5.0e-12 74.3 82 50.0
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 5.0e-12 74.3 82 51.2
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 6.5e-12 73.9 80 52.5
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 1.1e-11 73.2 73 52.1
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 1.1e-11 73.2 73 52.1
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 1.4e-11 72.8 86 47.7
MBI19_g03794_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D013368 3.2e-11 71.6 60 60.0
HPP92_012253 Vanilla planifolia HOM05D003939 ORTHO05D005979 7.2e-11 70.5 73 53.4
HPP92_012298 Vanilla planifolia HOM05D003939 ORTHO05D005979 7.2e-11 70.5 73 53.4
TAR629G2192 Trochodendron aralioides HOM05D003939 ORTHO05D013368 1.2e-10 69.7 64 57.8
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 1.6e-10 69.3 73 52.1
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 1.6e-10 69.3 73 52.1
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 1.0e-09 66.6 67 53.7
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 8.8e-09 63.5 71 49.3
SEGI_31617 Sequoiadendron giganteum HOM05D003939 ORTHO05D050928 5.3e-06 54.3 68 45.6


User provided reference genes

Program Settings