Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002388g0090 Nicotiana tabacum HOM05D005087 ORTHO05D006427 8.5e-87 323.6 154 100.0
Peaxi162Scf00694g00319 Petunia axillaris HOM05D005087 ORTHO05D006427 1.5e-54 216.5 105 100.0
Migut.B01270 Erythranthe guttata HOM05D005087 ORTHO05D006427 7.3e-54 214.2 105 98.1
SGA_v2.0_scaffold119G32758 Striga asiatica HOM05D005087 ORTHO05D006427 7.3e-54 214.2 105 98.1
Sopen01g034670 Solanum pennellii HOM05D005087 ORTHO05D006427 9.5e-54 213.8 105 99.0
Oeu049480.1 Olea europaea HOM05D005087 ORTHO05D006427 1.6e-53 213.0 107 96.3
MSTRG.17010 Avicennia marina HOM05D005087 ORTHO05D006427 2.1e-53 212.6 105 97.1
Solyc01g087720.4 Solanum lycopersicum HOM05D005087 ORTHO05D006427 2.1e-53 212.6 105 98.1
Potri.001G262600 Populus trichocarpa HOM05D005087 ORTHO05D006427 2.8e-53 212.2 111 91.9
Dinv09311 Davidia involucrata HOM05D005087 ORTHO05D006427 3.6e-53 211.8 111 91.0
CDE09G1121 Ceratophyllum demersum HOM05D005087 ORTHO05D006427 8.0e-53 210.7 118 86.4
SalBow5G0870 Salvia bowleyana HOM05D005087 ORTHO05D006427 8.0e-53 210.7 105 96.2
SalBow5G2001 Salvia bowleyana HOM05D005087 ORTHO05D006427 8.0e-53 210.7 105 96.2
Actinidia21540 Actinidia chinensis HOM05D005087 ORTHO05D006427 1.0e-52 210.3 105 97.1
Hma1.2p1_0685F.1_g203150 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 1.4e-52 209.9 105 95.2
Thecc.05G218700 Theobroma cacao HOM05D005087 ORTHO05D006427 1.8e-52 209.5 105 95.2
AL6G26800 Arabidopsis lyrata HOM05D005087 ORTHO05D006427 2.3e-52 209.1 105 95.2
CARHR197390 Cardamine hirsuta HOM05D005087 ORTHO05D006427 2.3e-52 209.1 105 95.2
DCAR_029700 Daucus carota HOM05D005087 ORTHO05D006427 3.1e-52 208.8 119 85.7
Ciclev10030582m.g Citrus clementina HOM05D005087 ORTHO05D006427 4.0e-52 208.4 105 94.3
Lj3g0015731 Lotus japonicus HOM05D005087 ORTHO05D006427 4.0e-52 208.4 114 87.7
Hund09863 Selenicereus undatus HOM05D005087 ORTHO05D006427 4.0e-52 208.4 105 94.3
Os05g0596600 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 5.2e-52 208.0 107 91.6
BcaB01g05014 Brassica carinata HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
A03p07470 Brassica napus HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
C03p08670 Brassica napus HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
BolC3t13367H Brassica oleracea HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
BraA03t10076Z Brassica rapa HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
CSS0029256 Camellia sinensis var. sinensis HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
Duzib177G0717 Durio zibethinus HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
Thhalv10012535m.g Eutrema salsugineum HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
Sp6g28190 Schrenkiella parvula HOM05D005087 ORTHO05D006427 6.8e-52 207.6 105 94.3
CiPaw.14G002700 Carya illinoinensis HOM05D005087 ORTHO05D006427 8.9e-52 207.2 105 94.3
Cpa.g.sc125.40 Carica papaya HOM05D005087 ORTHO05D006427 1.2e-51 206.8 105 94.3
Cfa022636 Carpinus fangiana HOM05D005087 ORTHO05D006427 1.2e-51 206.8 105 93.3
Haze_03133 Corylus avellana HOM05D005087 ORTHO05D006427 1.2e-51 206.8 105 93.3
Haze_03136 Corylus avellana HOM05D005087 ORTHO05D006427 1.2e-51 206.8 105 93.3
Medtr3g033470 Medicago truncatula HOM05D005087 ORTHO05D006427 1.2e-51 206.8 109 90.8
GSVIVG01032195001 Vitis vinifera HOM05D005087 ORTHO05D006427 1.2e-51 206.8 105 93.3
Carub.0006s1411 Capsella rubella HOM05D005087 ORTHO05D006427 1.5e-51 206.5 105 94.3
Medtr4g115050 Medicago truncatula HOM05D005087 ORTHO05D006427 1.5e-51 206.5 109 90.8
Ca_14518_v3 Cicer arietinum L. HOM05D005087 ORTHO05D006427 2.0e-51 206.1 105 93.3
Lj9C640G8 Lonicera japonica HOM05D005087 ORTHO05D006427 2.0e-51 206.1 112 90.2
THA.LOC104819098 Tarenaya hassleriana HOM05D005087 ORTHO05D006427 2.0e-51 206.1 105 93.3
Gohir.A13G157100 Gossypium hirsutum HOM05D005087 ORTHO05D006427 2.6e-51 205.7 112 88.4
Gohir.D13G161900 Gossypium hirsutum HOM05D005087 ORTHO05D006427 2.6e-51 205.7 112 88.4
Gorai.013G183900 Gossypium raimondii HOM05D005087 ORTHO05D006427 2.6e-51 205.7 112 88.4
ClCG09G004390 Citrullus lanatus HOM05D005087 ORTHO05D006427 3.4e-51 205.3 107 91.6
Manes.10G136400 Manihot esculenta HOM05D005087 ORTHO05D006427 3.4e-51 205.3 105 92.4
Medtr5g036370 Medicago truncatula HOM05D005087 ORTHO05D006427 3.4e-51 205.3 105 93.3
Prupe.2G022000 Prunus persica HOM05D005087 ORTHO05D006427 3.4e-51 205.3 105 92.4
Sed0026614 Sechium edule HOM05D005087 ORTHO05D006427 3.4e-51 205.3 107 91.6
TWI09G0473 Tripterygium wilfordii HOM05D005087 ORTHO05D006427 3.4e-51 205.3 111 88.3
TAR623G1255 Trochodendron aralioides HOM05D005087 ORTHO05D006427 3.4e-51 205.3 105 94.3
Glyma.20G198300 Glycine max HOM05D005087 ORTHO05D006427 4.4e-51 204.9 109 90.8
Nn7g36293 Nelumbo nucifera HOM05D005087 ORTHO05D006427 4.4e-51 204.9 107 89.7
Phvul.002G285500 Phaseolus vulgaris HOM05D005087 ORTHO05D006427 4.4e-51 204.9 105 93.3
Aqoxy1G00327 Aquilegia oxysepala HOM05D005087 ORTHO05D006427 5.8e-51 204.5 112 86.6
MELO3C023581.2 Cucumis melo HOM05D005087 ORTHO05D006427 5.8e-51 204.5 107 90.7
CsaV3_7G030750 Cucumis sativus L. HOM05D005087 ORTHO05D006427 5.8e-51 204.5 107 90.7
TPR.G14572 Trifolium pratense HOM05D005087 ORTHO05D006427 5.8e-51 204.5 105 92.4
QL04p009808 Quercus lobata HOM05D005087 ORTHO05D006427 7.5e-51 204.1 105 93.3
VMungo0251G2588 Vigna mungo HOM05D005087 ORTHO05D006427 7.5e-51 204.1 105 92.4
Medtr5g036330 Medicago truncatula HOM05D005087 ORTHO05D006427 9.8e-51 203.8 114 86.0
CANSAT80G0443 Cannabis sativa HOM05D005087 ORTHO05D006427 1.3e-50 203.4 105 91.4
FvH4_7g01640 Fragaria vesca HOM05D005087 ORTHO05D006427 1.3e-50 203.4 109 88.1
FAN03G0563 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.3e-50 203.4 109 88.1
FAN06G3789 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.3e-50 203.4 109 88.1
FAN10G1149 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.3e-50 203.4 109 88.1
EL10Ac2g04365 Beta vulgaris HOM05D005087 ORTHO05D006427 1.7e-50 203.0 105 92.4
ECA248G2604 Erigeron canadensis HOM05D005087 ORTHO05D006427 1.7e-50 203.0 105 92.4
Eucgr.G03334 Eucalyptus grandis HOM05D005087 ORTHO05D006427 1.7e-50 203.0 105 92.4
SEGI_29436 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 1.7e-50 203.0 105 90.5
AT5G15920 Arabidopsis thaliana HOM05D005087 ORTHO05D006427 2.9e-50 202.2 105 92.4
RcHm_v2.0_Chr1g0317911 Rosa chinensis HOM05D005087 ORTHO05D006427 2.9e-50 202.2 105 90.5
Rhsim01G0127000 Rhododendron simsii HOM05D005087 ORTHO05D006427 3.7e-50 201.8 132 79.5
HanXRQChr01g0007751 Helianthus annuus HOM05D005087 ORTHO05D006427 4.9e-50 201.4 105 91.4
Lsat_1_v5_gn_1_103161 Lactuca sativa HOM05D005087 ORTHO05D006427 6.4e-50 201.1 105 91.4
Psat6g018320 Pisum sativum HOM05D005087 ORTHO05D006427 8.3e-50 200.7 105 91.4
Atru.chr11.2578 Acer truncatum HOM05D005087 ORTHO05D006427 1.4e-49 199.9 103 92.2
Cc02_g28540 Coffea canephora HOM05D005087 ORTHO05D006427 1.4e-49 199.9 105 88.6
Lalb_Chr04g0263871 Lupinus albus HOM05D005087 ORTHO05D006427 1.9e-49 199.5 105 91.4
PSO210G7144 Papaver somniferum HOM05D005087 ORTHO05D006427 3.2e-49 198.7 129 77.5
PGR031G1517 Punica granatum HOM05D005087 ORTHO05D006427 3.2e-49 198.7 105 89.5
SMO143G0265 Selaginella moellendorffii HOM05D005087 ORTHO05D006427 5.4e-49 198.0 105 90.5
SEGI_04619 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 7.0e-49 197.6 105 89.5
PSO339G3397 Papaver somniferum HOM05D005087 ORTHO05D006427 1.2e-48 196.8 107 86.9
Lj3g0013327 Lotus japonicus HOM05D005087 ORTHO05D006427 3.5e-48 195.3 105 89.5
PSO384G1020 Papaver somniferum HOM05D005087 ORTHO05D006427 3.0e-47 192.2 107 86.0
Pp3c24_4940 Physcomitrium patens HOM05D005087 ORTHO05D006427 6.6e-47 191.0 108 83.3
Mapoly0007s0066 Marchantia polymorpha HOM05D005087 ORTHO05D006427 3.3e-46 188.7 104 84.6
Aa31LG11G13680 Aethionema arabicum HOM05D005087 ORTHO05D006427 1.2e-45 186.8 130 75.4
MD07G1021900 Malus domestica HOM05D005087 ORTHO05D006427 6.8e-44 181.0 99 86.9
CBR_g88572 Chara braunii HOM05D005087 ORTHO05D000002 8.3e-42 174.1 104 81.7
SHI04084 Sapria himalayana HOM05D005087 ORTHO05D006427 1.6e-40 169.9 102 81.4
arahy.Tifrunner.gnm1.ann1.1A5L99 Arachis hypogaea HOM05D005087 ORTHO05D006427 2.1e-40 169.5 92 88.0
arahy.Tifrunner.gnm1.ann1.JJ1LEU Arachis hypogaea HOM05D005087 ORTHO05D006427 2.1e-40 169.5 92 88.0
Nitab4.5_0000707g0060 Nicotiana tabacum HOM05D005087 ORTHO05D006427 2.5e-38 162.5 82 92.7
Lju99A9T21 Lonicera japonica HOM05D005087 ORTHO05D006427 1.7e-34 149.8 112 70.5
MCO04G035 Micromonas commoda HOM05D005087 ORTHO05D006427 2.4e-33 146.0 111 59.5
Cre10.g440200 Chlamydomonas reinhardtii HOM05D005087 ORTHO05D006427 1.3e-31 140.2 98 68.4
AUR62009415 Chenopodium quinoa HOM05D005087 ORTHO05D006427 5.1e-31 138.3 70 97.1
AUR62023092 Chenopodium quinoa HOM05D005087 ORTHO05D006427 6.6e-31 137.9 71 95.8
PRCOL_00002930 Prasinoderma coloniale HOM05D005087 ORTHO05D006427 4.3e-30 135.2 107 60.7
Medtr5g036300 Medicago truncatula HOM05D005087 ORTHO05D006427 9.6e-30 134.0 88 78.4
SGA_v2.0_scaffold42G16189 Striga asiatica HOM05D005087 ORTHO05D006427 6.4e-26 121.3 68 82.4
Cre10.g440300 Chlamydomonas reinhardtii HOM05D005087 ORTHO05D006427 1.6e-24 116.7 82 65.9
Sabra16G0161000 Salix brachista HOM05D005087 ORTHO05D006427 1.4e-17 93.6 48 93.8
ATR0626G229 Amborella trichopoda HOM05D005087 ORTHO05D006427 3.2e-17 92.4 46 95.7
Cfa027028 Carpinus fangiana HOM05D005087 ORTHO05D006427 1.2e-16 90.5 124 42.7
FAN01G1492 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.1e-09 67.4 51 60.8
MBI11_g23279_MAGBIO Magnolia biondii HOM05D005087 ORTHO05D006427 1.0e-07 60.8 35 71.4


User provided reference genes

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