Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 0.0e+00 1165.6 606 100.0
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.4e-302 1042.3 685 81.8
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 5.2e-289 997.3 691 78.7
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 5.4e-286 987.3 691 78.3
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 1.7e-284 982.2 691 77.1
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 3.0e-284 981.5 691 78.1
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 8.1e-274 946.8 691 75.3
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 6.2e-258 894.0 624 78.8
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 3.1e-201 705.7 681 58.1
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 8.5e-199 697.6 686 56.7
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 2.4e-193 679.5 697 55.8
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 4.1e-193 678.7 676 54.9
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 7.0e-185 651.4 680 54.9
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 4.5e-184 648.7 730 51.4
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 1.0e-183 647.5 683 54.2
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 6.6e-183 644.8 695 53.7
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 8.6e-183 644.4 700 52.7
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 1.1e-182 644.0 655 54.4
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 1.3e-178 630.6 673 52.7
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 8.3e-178 627.9 667 53.4
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 8.3e-178 627.9 694 52.2
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 1.1e-177 627.5 679 52.4
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 9.2e-177 624.4 679 52.1
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.7e-175 620.2 614 59.9
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 1.9e-174 616.7 655 54.4
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 3.3e-174 615.9 655 52.5
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 1.2e-173 614.0 696 50.7
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 1.6e-173 613.6 680 50.9
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 1.0e-172 610.9 683 50.1
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 1.4e-172 610.5 697 51.1
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 1.2e-171 607.4 697 50.8
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 5.8e-171 605.1 699 50.6
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 5.0e-167 592.0 561 59.2
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 5.0e-167 592.0 697 49.5
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 4.3e-166 589.0 695 50.4
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 2.8e-165 586.3 723 48.3
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 5.8e-163 578.6 676 49.3
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 1.3e-162 577.4 652 51.4
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 2.2e-162 576.6 681 48.6
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.2e-162 576.6 677 49.0
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 2.2e-162 576.6 726 47.9
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 8.3e-162 574.7 677 48.9
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 1.1e-161 574.3 699 48.9
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 9.2e-161 571.2 653 50.1
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 1.7e-159 567.0 845 43.0
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 2.5e-158 563.1 657 49.0
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 7.3e-158 561.6 685 48.0
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 6.2e-157 558.5 682 47.7
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 1.1e-156 557.8 698 49.3
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 1.2e-155 554.3 719 47.0
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 3.4e-155 552.7 682 47.4
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 7.6e-155 551.6 642 50.6
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 2.9e-154 549.7 694 46.5
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 1.9e-153 547.0 649 48.2
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 4.1e-153 545.8 715 45.9
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 7.1e-153 545.0 665 47.4
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.6e-152 543.9 709 45.7
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 6.0e-152 542.0 709 45.7
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 5.1e-151 538.9 698 45.7
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 6.6e-151 538.5 676 46.3
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 3.3e-150 536.2 665 46.6
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 3.3e-150 536.2 658 46.2
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 3.3e-150 536.2 714 45.8
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 4.3e-150 535.8 698 46.1
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 5.6e-150 535.4 697 46.3
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 7.3e-150 535.0 665 47.1
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 4.7e-149 532.3 698 45.3
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 6.2e-149 531.9 617 49.6
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.4e-148 530.0 665 46.6
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 2.4e-148 530.0 664 46.1
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 3.1e-148 529.6 733 45.3
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 6.8e-148 528.5 642 46.4
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 2.0e-147 526.9 686 45.5
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 1.7e-146 523.9 693 44.4
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 6.4e-146 521.9 698 44.6
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 8.4e-146 521.5 651 46.2
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 1.4e-145 520.8 686 44.9
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 1.9e-145 520.4 684 45.9
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 2.1e-144 516.9 655 47.6
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 3.5e-144 516.2 691 45.3
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 7.8e-144 515.0 723 43.8
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.7e-143 513.8 631 46.1
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 2.3e-143 513.5 727 43.2
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 5.1e-143 512.3 533 58.9
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 6.6e-143 511.9 670 44.2
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 2.1e-141 506.9 619 47.7
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 3.6e-141 506.1 702 44.0
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 6.2e-141 505.4 649 45.1
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 8.1e-141 505.0 703 44.0
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 1.1e-140 504.6 703 44.0
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 1.8e-140 503.8 702 44.3
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 7.6e-139 498.4 697 43.6
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 1.3e-138 497.7 695 43.7
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 6.0e-136 488.8 1044 35.2
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 8.7e-135 485.0 698 43.1
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 3.4e-131 473.0 681 44.2
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 2.4e-124 450.3 614 45.4
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 2.5e-121 440.3 594 43.3
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.7e-120 436.8 619 42.8
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 3.9e-119 433.0 674 39.8
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 3.3e-118 429.9 599 44.2
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.6e-112 411.0 516 46.9
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 7.0e-92 342.4 368 54.1
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 7.2e-73 279.3 607 31.0
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 8.0e-72 275.8 371 45.0
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 4.4e-70 270.0 320 49.1
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 1.3e-69 268.5 641 29.5
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 2.7e-67 260.8 180 77.8
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 1.0e-66 258.8 615 31.2
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 2.9e-61 240.7 325 43.4
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 4.9e-61 240.0 578 30.3
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 1.4e-55 221.9 238 51.7
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 2.2e-45 188.0 569 31.3
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 5.2e-39 166.8 607 26.5
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 8.9e-39 166.0 164 51.2
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 7.8e-27 126.3 681 22.8
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 3.0e-26 124.4 220 36.8
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 8.7e-26 122.9 111 57.7
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 3.1e-23 114.4 189 40.2
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 2.5e-17 94.7 124 47.6
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 7.4e-17 93.2 92 51.1
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 3.6e-16 90.9 159 40.9
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 9.0e-15 86.3 135 32.6
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 4.5e-14 84.0 74 55.4
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 6.4e-13 80.1 462 21.9
MBI15_g00935_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D016670 6.0e-11 73.6 125 40.0
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 3.0e-10 71.2 101 48.5
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 5.6e-09 67.0 134 37.3
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 3.1e-07 61.2 70 44.3


User provided reference genes

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