Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 3.1e-207 724.9 371 100.0
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 8.6e-202 706.8 371 97.3
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 6.0e-179 630.9 397 84.9
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 4.4e-174 614.8 357 88.2
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 6.4e-173 610.9 357 87.7
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 1.4e-172 609.8 357 87.4
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 9.3e-172 607.1 357 87.4
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.1e-171 605.9 349 89.4
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 4.6e-171 604.7 357 86.8
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 5.8e-166 587.8 384 81.2
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 3.0e-162 575.5 371 80.6
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 6.7e-162 574.3 363 82.1
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 1.9e-161 572.8 366 81.4
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 1.9e-161 572.8 365 82.5
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 2.5e-161 572.4 373 80.7
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 4.3e-161 571.6 377 79.8
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 2.1e-160 569.3 370 79.5
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 6.2e-160 567.8 373 80.2
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 3.4e-158 562.0 373 76.9
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 3.4e-158 562.0 373 76.9
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 3.8e-157 558.5 350 83.7
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 8.4e-157 557.4 334 85.0
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 1.1e-156 557.0 352 81.0
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 1.1e-156 557.0 355 81.7
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 2.5e-156 555.8 330 86.7
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 1.6e-155 553.1 353 82.4
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 2.1e-155 552.7 347 82.7
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 2.1e-155 552.7 373 77.7
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 3.5e-155 552.0 347 82.4
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 6.0e-155 551.2 353 80.7
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 6.0e-155 551.2 344 82.0
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 1.3e-154 550.1 353 82.4
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 1.8e-154 549.7 361 77.6
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 3.0e-154 548.9 337 82.5
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 5.1e-154 548.1 366 77.9
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 5.1e-154 548.1 326 85.3
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 6.7e-154 547.7 347 82.4
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 1.9e-153 546.2 328 85.1
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 3.3e-153 545.4 347 81.8
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 3.3e-153 545.4 347 80.7
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 4.3e-153 545.0 362 77.6
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 4.3e-153 545.0 337 82.5
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 5.7e-153 544.7 357 77.3
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 7.4e-153 544.3 362 77.9
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 7.4e-153 544.3 346 82.4
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 9.6e-153 543.9 341 83.0
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 9.6e-153 543.9 363 79.1
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 1.6e-152 543.1 342 83.0
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 2.1e-152 542.7 324 84.3
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 2.1e-152 542.7 350 80.9
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 2.8e-152 542.3 324 83.6
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 3.7e-152 542.0 330 83.0
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 3.7e-152 542.0 355 78.6
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 4.8e-152 541.6 358 78.5
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 6.3e-152 541.2 325 84.9
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 6.3e-152 541.2 324 84.0
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 6.3e-152 541.2 340 83.2
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 6.3e-152 541.2 360 78.3
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 8.2e-152 540.8 330 84.2
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 1.4e-151 540.0 360 78.6
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 4.1e-151 538.5 365 76.7
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 5.3e-151 538.1 339 81.1
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 6.9e-151 537.7 324 83.6
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 1.5e-150 536.6 365 77.5
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 2.0e-150 536.2 348 79.0
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 2.0e-150 536.2 331 81.6
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 2.0e-150 536.2 326 83.1
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 2.6e-150 535.8 366 77.6
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 4.5e-150 535.0 348 80.2
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 7.6e-150 534.3 376 74.5
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 1.7e-149 533.1 347 80.1
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 2.2e-149 532.7 331 82.2
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 2.2e-149 532.7 339 80.5
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 2.9e-149 532.3 462 63.9
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 5.0e-149 531.6 318 85.5
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 6.5e-149 531.2 331 80.4
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 8.4e-149 530.8 338 80.8
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 1.1e-148 530.4 353 79.0
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.1e-148 530.4 315 85.4
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 1.1e-148 530.4 361 77.3
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 1.9e-148 529.6 367 76.0
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.9e-148 529.6 367 76.0
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 1.9e-148 529.6 350 78.9
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 3.2e-148 528.9 350 77.1
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 5.5e-148 528.1 341 79.8
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 7.2e-148 527.7 344 79.9
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 9.3e-148 527.3 339 80.2
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.1e-147 526.2 339 79.9
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 6.1e-147 524.6 367 76.3
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 6.1e-147 524.6 353 77.1
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 6.1e-147 524.6 353 77.3
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 7.9e-147 524.2 370 74.6
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 7.9e-147 524.2 335 80.9
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 1.0e-146 523.9 353 77.1
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 1.3e-146 523.5 339 78.8
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 1.3e-146 523.5 373 74.0
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 1.8e-146 523.1 370 74.6
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 1.8e-146 523.1 373 73.5
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 2.3e-146 522.7 388 71.1
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 3.0e-146 522.3 389 71.0
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 3.9e-146 521.9 356 77.0
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 3.9e-146 521.9 356 75.8
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 3.9e-146 521.9 358 75.1
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 3.9e-146 521.9 373 74.3
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 5.1e-146 521.5 373 73.7
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 5.1e-146 521.5 373 73.7
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 5.1e-146 521.5 332 79.8
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 8.7e-146 520.8 355 76.9
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 1.1e-145 520.4 370 74.6
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 1.1e-145 520.4 369 76.2
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 1.5e-145 520.0 373 73.7
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 2.5e-145 519.2 394 70.1
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 3.3e-145 518.8 356 76.7
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 2.8e-144 515.8 401 68.8
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 2.8e-144 515.8 341 77.4
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 3.7e-144 515.4 356 76.1
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 3.7e-144 515.4 356 76.1
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 4.8e-144 515.0 356 76.4
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 4.8e-144 515.0 356 76.4
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 4.8e-144 515.0 367 74.9
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 4.8e-144 515.0 367 74.9
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 8.2e-144 514.2 342 77.2
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.1e-143 513.8 315 83.5
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 3.1e-143 512.3 415 66.7
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 6.9e-143 511.1 371 72.5
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 1.5e-142 510.0 324 80.9
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 3.4e-142 508.8 351 73.2
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 5.9e-142 508.1 325 79.4
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 1.7e-141 506.5 351 72.9
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 6.5e-141 504.6 301 84.1
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 2.7e-139 499.2 368 71.7
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 3.3e-137 492.3 287 85.0
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.2e-136 489.6 287 86.4
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 1.8e-135 486.5 325 76.9
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 3.4e-134 482.3 373 69.7
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 3.8e-133 478.8 329 73.3
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 8.5e-133 477.6 318 77.7
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 2.5e-132 476.1 330 72.4
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.1e-131 473.0 314 75.8
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 2.7e-131 472.6 370 69.5
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 7.9e-131 471.1 328 72.3
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 1.0e-130 470.7 314 75.8
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 9.7e-129 464.2 361 68.1
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 1.3e-128 463.8 322 71.4
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 5.9e-126 454.9 299 76.9
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 1.3e-125 453.8 309 74.4
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 5.5e-124 448.4 299 74.6
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 3.2e-116 422.5 297 72.4
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 2.3e-114 416.4 253 85.4
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 2.7e-110 402.9 250 82.4
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 2.3e-106 389.8 321 62.9
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 1.3e-101 374.0 244 80.7
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 1.7e-96 357.1 289 63.0
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 1.8e-90 337.0 229 76.0
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 2.6e-73 280.0 206 72.8
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 1.7e-72 277.3 268 59.7
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 8.4e-72 275.0 197 75.1
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 4.3e-68 262.7 308 51.0
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 3.4e-65 253.1 375 44.5
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 9.9e-49 198.4 112 84.8
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 1.1e-42 178.3 113 78.8
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 4.2e-39 166.4 169 60.4
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 4.2e-39 166.4 169 60.4
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 4.2e-39 166.4 169 60.4
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 1.6e-35 154.5 301 35.5
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 9.0e-34 148.7 104 70.2
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 2.6e-33 147.1 102 71.6
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 2.6e-33 147.1 102 71.6
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 1.7e-32 144.4 102 70.6
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 1.4e-31 141.4 106 67.0
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 7.2e-31 139.0 98 69.4
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 4.6e-30 136.3 107 62.6
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 6.7e-29 132.5 106 62.3
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 9.1e-18 95.5 64 70.3
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 1.2e-17 95.1 67 74.6
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 2.9e-16 90.5 49 89.8
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 3.2e-15 87.0 61 77.0
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 7.0e-10 69.3 38 81.6
BcaC01g02956 Brassica carinata HOM05D003055 ORTHO05D013026 7.7e-09 65.9 38 78.9


User provided reference genes

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