Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001206g0010 Nicotiana tabacum HOM05D001392 ORTHO05D014312 4.2e-60 234.6 125 100.0
Nitab4.5_0003197g0040 Nicotiana tabacum HOM05D001392 ORTHO05D006407 2.3e-58 228.8 125 97.6
CAN.G207.6 Capsicum annuum HOM05D001392 ORTHO05D006407 3.5e-54 214.9 125 89.6
Sopen12g009300 Solanum pennellii HOM05D001392 ORTHO05D006407 1.7e-53 212.6 125 88.8
Solyc12g019110.3 Solanum lycopersicum HOM05D001392 ORTHO05D006407 1.5e-52 209.5 125 88.0
Migut.D01299 Erythranthe guttata HOM05D001392 ORTHO05D006407 9.7e-49 196.8 122 82.8
Hma1.2p1_0524F.1_g172370 Hydrangea macrophylla HOM05D001392 ORTHO05D014312 6.3e-48 194.1 123 81.3
Atru.chr1.1875 Acer truncatum HOM05D001392 ORTHO05D006407 3.1e-47 191.8 119 83.2
Ciclev10010998m.g Citrus clementina HOM05D001392 ORTHO05D006407 4.1e-47 191.4 122 81.1
Hma1.2p1_0524F.1_g172350 Hydrangea macrophylla HOM05D001392 ORTHO05D006407 5.3e-47 191.0 120 81.7
PGR004G0453 Punica granatum HOM05D001392 ORTHO05D006407 9.1e-47 190.3 122 79.5
SGA_v2.0_scaffold40G15632 Striga asiatica HOM05D001392 ORTHO05D006407 1.2e-46 189.9 122 81.1
SalBow5G1075 Salvia bowleyana HOM05D001392 ORTHO05D006407 2.0e-46 189.1 121 80.2
MSTRG.4620 Avicennia marina HOM05D001392 ORTHO05D006407 2.7e-46 188.7 122 78.7
Hma1.2p1_1840F.1_g304940 Hydrangea macrophylla HOM05D001392 ORTHO05D014312 2.7e-46 188.7 119 81.5
COL.COLO4_09038 Corchorus olitorius HOM05D001392 ORTHO05D006407 3.5e-46 188.3 122 79.5
Actinidia35731 Actinidia chinensis HOM05D001392 ORTHO05D006407 5.9e-46 187.6 118 82.2
Dinv19030 Davidia involucrata HOM05D001392 ORTHO05D006407 7.7e-46 187.2 122 80.3
Potri.017G124500 Populus trichocarpa HOM05D001392 ORTHO05D006407 1.3e-45 186.4 125 76.8
Cpa.g.sc116.46 Carica papaya HOM05D001392 ORTHO05D006407 2.2e-45 185.7 122 79.5
Rhsim08G0018500 Rhododendron simsii HOM05D001392 ORTHO05D006407 2.2e-45 185.7 122 78.7
Thecc.04G116700 Theobroma cacao HOM05D001392 ORTHO05D006407 2.2e-45 185.7 122 77.9
vmacro18535 Vaccinium macrocarpon HOM05D001392 ORTHO05D006407 6.5e-45 184.1 122 77.9
CSS0004873 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D006407 1.1e-44 183.3 122 77.9
CSS0005968 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D006407 1.1e-44 183.3 122 77.9
Duzib133G1570 Durio zibethinus HOM05D001392 ORTHO05D006407 2.5e-44 182.2 122 76.2
arahy.Tifrunner.gnm1.ann1.0T11RW Arachis hypogaea HOM05D001392 ORTHO05D006407 3.2e-44 181.8 122 75.4
Manes.02G076200 Manihot esculenta HOM05D001392 ORTHO05D006407 2.1e-43 179.1 117 77.8
GSVIVG01027222001 Vitis vinifera HOM05D001392 ORTHO05D006407 2.1e-43 179.1 122 76.2
Lsat_1_v5_gn_3_65141 Lactuca sativa HOM05D001392 ORTHO05D006407 3.6e-43 178.3 121 74.4
GSVIVG01030775001 Vitis vinifera HOM05D001392 ORTHO05D006407 3.6e-43 178.3 122 74.6
Psat1g089800 Pisum sativum HOM05D001392 ORTHO05D006407 4.7e-43 177.9 122 74.6
Actinidia28813 Actinidia chinensis HOM05D001392 ORTHO05D014312 6.1e-43 177.6 122 74.6
MBI11_g24566_MAGBIO Magnolia biondii HOM05D001392 ORTHO05D006407 8.0e-43 177.2 128 71.9
unitig_749.g13792 Utricularia gibba HOM05D001392 ORTHO05D006407 8.0e-43 177.2 119 74.8
Gohir.A10G243050 Gossypium hirsutum HOM05D001392 ORTHO05D006407 1.0e-42 176.8 120 74.2
HanXRQChr10g0283681 Helianthus annuus HOM05D001392 ORTHO05D006407 1.0e-42 176.8 122 73.8
Lalb_Chr14g0364821 Lupinus albus HOM05D001392 ORTHO05D006407 1.0e-42 176.8 120 75.0
Os07g0163500 Oryza sativa ssp. japonica HOM05D001392 ORTHO05D006407 1.0e-42 176.8 117 75.2
Medtr6g027620 Medicago truncatula HOM05D001392 ORTHO05D006407 1.8e-42 176.0 122 73.8
THA.LOC104827192 Tarenaya hassleriana HOM05D001392 ORTHO05D006407 1.8e-42 176.0 120 74.2
Zm00001eb117220 Zea mays HOM05D001392 ORTHO05D006407 1.8e-42 176.0 117 75.2
ECA246G3910 Erigeron canadensis HOM05D001392 ORTHO05D006407 2.3e-42 175.6 122 73.0
Ca_25679_v3 Cicer arietinum L. HOM05D001392 ORTHO05D006407 3.0e-42 175.3 122 73.8
Peaxi162Scf00057g02723 Petunia axillaris HOM05D001392 ORTHO05D014312 3.0e-42 175.3 99 91.9
CiPaw.09G167000 Carya illinoinensis HOM05D001392 ORTHO05D006407 4.0e-42 174.9 122 73.0
TWI74G1301 Tripterygium wilfordii HOM05D001392 ORTHO05D006407 6.8e-42 174.1 117 76.9
Gohir.D10G255000 Gossypium hirsutum HOM05D001392 ORTHO05D006407 8.8e-42 173.7 119 73.1
Sp6g27440 Schrenkiella parvula HOM05D001392 ORTHO05D006407 1.5e-41 172.9 122 73.8
Aa31LG11G12960 Aethionema arabicum HOM05D001392 ORTHO05D006407 3.4e-41 171.8 122 73.0
Thhalv10012577m.g Eutrema salsugineum HOM05D001392 ORTHO05D006407 3.4e-41 171.8 122 73.8
Cfa017719 Carpinus fangiana HOM05D001392 ORTHO05D006407 4.4e-41 171.4 122 75.4
QL07p019084 Quercus lobata HOM05D001392 ORTHO05D006407 4.4e-41 171.4 118 75.4
TPR.G35631 Trifolium pratense HOM05D001392 ORTHO05D006407 4.4e-41 171.4 122 71.3
Glyma.17G186800 Glycine max HOM05D001392 ORTHO05D006407 5.7e-41 171.0 122 73.8
MELO3C020199.2 Cucumis melo HOM05D001392 ORTHO05D006407 7.5e-41 170.6 116 74.1
CARHR196470 Cardamine hirsuta HOM05D001392 ORTHO05D006407 9.8e-41 170.2 122 73.0
CANSAT71G0007 Cannabis sativa HOM05D001392 ORTHO05D006407 1.3e-40 169.9 122 72.1
CsaV3_3G020830 Cucumis sativus L. HOM05D001392 ORTHO05D006407 1.3e-40 169.9 117 75.2
Lj2g0008629 Lotus japonicus HOM05D001392 ORTHO05D006407 1.7e-40 169.5 122 71.3
MD17G1258800 Malus domestica HOM05D001392 ORTHO05D014312 2.8e-40 168.7 139 65.5
Gohir.A12G276975 Gossypium hirsutum HOM05D001392 ORTHO05D014312 4.8e-40 167.9 125 68.0
RcHm_v2.0_Chr1g0328051 Rosa chinensis HOM05D001392 ORTHO05D006407 6.3e-40 167.5 122 68.9
BcaC04g18859 Brassica carinata HOM05D001392 ORTHO05D006407 1.4e-39 166.4 115 74.8
C09p60360 Brassica napus HOM05D001392 ORTHO05D006407 1.4e-39 166.4 115 74.8
BolC9t58869H Brassica oleracea HOM05D001392 ORTHO05D006407 1.4e-39 166.4 115 74.8
Hund13115 Selenicereus undatus HOM05D001392 ORTHO05D006407 1.4e-39 166.4 120 73.3
AT5G16715 Arabidopsis thaliana HOM05D001392 ORTHO05D006407 1.8e-39 166.0 115 73.9
FvH4_7g04130 Fragaria vesca HOM05D001392 ORTHO05D006407 1.8e-39 166.0 119 71.4
Phvul.004G073700 Phaseolus vulgaris HOM05D001392 ORTHO05D006407 1.8e-39 166.0 122 69.7
Sed0009589 Sechium edule HOM05D001392 ORTHO05D006407 1.8e-39 166.0 117 71.8
A10p22510 Brassica napus HOM05D001392 ORTHO05D006407 2.4e-39 165.6 122 71.3
BraA10t44310Z Brassica rapa HOM05D001392 ORTHO05D006407 2.4e-39 165.6 122 71.3
Carub.0006s1493 Capsella rubella HOM05D001392 ORTHO05D006407 2.4e-39 165.6 122 70.5
Aqoxy2G00612 Aquilegia oxysepala HOM05D001392 ORTHO05D006407 3.1e-39 165.2 125 67.2
AL6G27720 Arabidopsis lyrata HOM05D001392 ORTHO05D006407 3.1e-39 165.2 115 73.9
CDE10G1341 Ceratophyllum demersum HOM05D001392 ORTHO05D006407 3.5e-38 161.8 120 66.7
PSO339G4038 Papaver somniferum HOM05D001392 ORTHO05D006407 3.5e-38 161.8 124 69.4
VMungo0464G0907 Vigna mungo HOM05D001392 ORTHO05D006407 1.0e-37 160.2 114 71.9
Gorai.011G296000 Gossypium raimondii HOM05D001392 ORTHO05D006407 2.3e-37 159.1 122 68.0
Gohir.A08G253800 Gossypium hirsutum HOM05D001392 ORTHO05D006407 3.8e-37 158.3 122 68.9
Ah.12g060150 Amaranthus hybridus HOM05D001392 ORTHO05D006407 1.1e-36 156.8 119 68.1
EL10Ac2g03165 Beta vulgaris HOM05D001392 ORTHO05D006407 1.1e-36 156.8 119 68.1
PSO384G0294 Papaver somniferum HOM05D001392 ORTHO05D006407 1.5e-36 156.4 124 67.7
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 2.5e-36 155.6 103 74.8
Gorai.008G298900 Gossypium raimondii HOM05D001392 ORTHO05D014312 2.5e-36 155.6 103 74.8
ATR0697G119 Amborella trichopoda HOM05D001392 ORTHO05D006407 3.3e-36 155.2 125 64.0
Sabra17G0105100 Salix brachista HOM05D001392 ORTHO05D006407 9.5e-36 153.7 95 83.2
Haze_20419 Corylus avellana HOM05D001392 ORTHO05D006407 6.1e-35 151.0 140 60.7
MD09G1264300 Malus domestica HOM05D001392 ORTHO05D014312 6.8e-34 147.5 96 79.2
BcaC04g18858 Brassica carinata HOM05D001392 ORTHO05D014312 2.0e-33 146.0 105 72.4
DCAR_003434 Daucus carota HOM05D001392 ORTHO05D006407 3.4e-33 145.2 98 73.5
Gohir.D07G000800 Gossypium hirsutum HOM05D001392 ORTHO05D014312 2.2e-32 142.5 96 72.9
FAN03G0802 Fragaria x ananassa HOM05D001392 ORTHO05D006407 4.1e-31 138.3 95 74.7
ClCG05G011510 Citrullus lanatus HOM05D001392 ORTHO05D006407 2.0e-30 136.0 97 72.2
Oeu023509.1 Olea europaea HOM05D001392 ORTHO05D006407 3.5e-30 135.2 122 62.3
SEGI_33021 Sequoiadendron giganteum HOM05D001392 ORTHO05D014312 3.5e-30 135.2 117 57.3
Pp3c12_13790 Physcomitrium patens HOM05D001392 ORTHO05D006407 1.3e-29 133.3 118 55.9
FAN13G1017 Fragaria x ananassa HOM05D001392 ORTHO05D006407 2.8e-27 125.6 107 65.4
MD05G1034800 Malus domestica HOM05D001392 ORTHO05D006407 6.1e-27 124.4 94 70.2
Mapoly0040s0139 Marchantia polymorpha HOM05D001392 ORTHO05D006407 6.1e-27 124.4 115 54.8
Nn7g38289 Nelumbo nucifera HOM05D001392 ORTHO05D006407 8.9e-26 120.6 81 77.8
Eucgr.F02848 Eucalyptus grandis HOM05D001392 ORTHO05D006407 3.4e-25 118.6 77 76.6
AUR62038699 Chenopodium quinoa HOM05D001392 ORTHO05D014312 1.3e-24 116.7 77 76.6
Gohir.D01G222000 Gossypium hirsutum HOM05D001392 ORTHO05D006407 1.3e-24 116.7 77 75.3
Gorai.002G268700 Gossypium raimondii HOM05D001392 ORTHO05D006407 1.3e-24 116.7 77 75.3
AUR62018211 Chenopodium quinoa HOM05D001392 ORTHO05D006407 8.3e-24 114.0 77 75.3
MCO14G022 Micromonas commoda HOM05D001392 ORTHO05D006407 8.6e-13 77.4 112 40.2
PRCOL_00006335 Prasinoderma coloniale HOM05D001392 ORTHO05D006407 2.4e-07 59.3 106 34.9


User provided reference genes

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