Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001168g0170 Nicotiana tabacum HOM05D006408 ORTHO05D008038 1.1e-187 659.8 332 100.0
Solyc04g057870.3 Solanum lycopersicum HOM05D006408 ORTHO05D008038 1.2e-154 550.1 336 84.2
Sopen04g025710 Solanum pennellii HOM05D006408 ORTHO05D008038 2.1e-154 549.3 336 84.5
PGSC0003DMG400028061 Solanum tuberosum HOM05D006408 ORTHO05D008038 8.6e-153 543.9 336 85.1
Peaxi162Scf00066g00222 Petunia axillaris HOM05D006408 ORTHO05D008038 6.8e-150 534.3 340 81.2
CAN.G288.5 Capsicum annuum HOM05D006408 ORTHO05D008038 5.8e-149 531.2 334 82.0
Nitab4.5_0003978g0010 Nicotiana tabacum HOM05D006408 ORTHO05D008038 2.4e-139 499.2 264 95.5
CANSAT25G1301 Cannabis sativa HOM05D006408 ORTHO05D008038 2.0e-133 479.6 328 72.3
TAR628G0457 Trochodendron aralioides HOM05D006408 ORTHO05D008038 2.0e-133 479.6 326 73.6
CiPaw.16G022700 Carya illinoinensis HOM05D006408 ORTHO05D008038 2.9e-132 475.7 328 72.6
Sp1g19130 Schrenkiella parvula HOM05D006408 ORTHO05D008038 3.2e-131 472.2 286 79.7
MELO3C010512.2 Cucumis melo HOM05D006408 ORTHO05D008038 3.5e-130 468.8 331 70.7
PSO017G3385 Papaver somniferum HOM05D006408 ORTHO05D008038 3.5e-130 468.8 347 69.7
Cfa018129 Carpinus fangiana HOM05D006408 ORTHO05D008038 7.9e-130 467.6 336 72.0
ClCG11G015980 Citrullus lanatus HOM05D006408 ORTHO05D008038 1.0e-129 467.2 327 71.6
CsaV3_4G028270 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.0e-129 467.2 286 78.7
PSO170G2303 Papaver somniferum HOM05D006408 ORTHO05D008038 1.8e-129 466.5 340 70.3
CARHR021960 Cardamine hirsuta HOM05D006408 ORTHO05D008038 5.1e-129 464.9 323 71.8
THA.LOC104814021 Tarenaya hassleriana HOM05D006408 ORTHO05D008038 1.1e-128 463.8 278 79.5
AL1G34740 Arabidopsis lyrata HOM05D006408 ORTHO05D008038 1.5e-128 463.4 327 71.3
Prupe.1G489500 Prunus persica HOM05D006408 ORTHO05D008038 3.3e-128 462.2 280 79.3
MBI03_g48069_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 1.3e-127 460.3 294 76.2
Nn1g08961 Nelumbo nucifera HOM05D006408 ORTHO05D008038 2.1e-127 459.5 323 71.5
Gorai.005G087700 Gossypium raimondii HOM05D006408 ORTHO05D008038 3.7e-127 458.8 335 70.4
RcHm_v2.0_Chr6g0296711 Rosa chinensis HOM05D006408 ORTHO05D008038 3.7e-127 458.8 322 71.4
Aa31LG7G5580 Aethionema arabicum HOM05D006408 ORTHO05D008038 4.8e-127 458.4 346 67.6
Aqoxy5G02393 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 4.8e-127 458.4 337 69.1
PGR083G0137 Punica granatum HOM05D006408 ORTHO05D008038 8.1e-127 457.6 341 68.9
MD08G1159400 Malus domestica HOM05D006408 ORTHO05D008038 2.4e-126 456.1 338 68.9
Cpa.g.sc26.317 Carica papaya HOM05D006408 ORTHO05D008038 4.0e-126 455.3 334 70.1
Manes.02G168400 Manihot esculenta HOM05D006408 ORTHO05D008038 6.9e-126 454.5 332 71.7
EL10Ac1g01346 Beta vulgaris HOM05D006408 ORTHO05D008038 9.0e-126 454.1 338 69.5
A06p17690 Brassica napus HOM05D006408 ORTHO05D008038 1.2e-125 453.8 285 77.9
BraA06t24861Z Brassica rapa HOM05D006408 ORTHO05D008038 1.2e-125 453.8 285 77.9
unitig_52.g17545 Utricularia gibba HOM05D006408 ORTHO05D008038 2.6e-125 452.6 286 78.7
Actinidia15213 Actinidia chinensis HOM05D006408 ORTHO05D008038 3.4e-125 452.2 323 73.4
Thecc.08G133100 Theobroma cacao HOM05D006408 ORTHO05D008038 3.4e-125 452.2 312 73.4
Potri.002G078900 Populus trichocarpa HOM05D006408 ORTHO05D008038 5.8e-125 451.4 300 75.3
C05p20590 Brassica napus HOM05D006408 ORTHO05D008038 7.6e-125 451.1 311 72.3
BolC5t30757H Brassica oleracea HOM05D006408 ORTHO05D008038 7.6e-125 451.1 311 72.3
Hma1.2p1_1121F.1_g259280 Hydrangea macrophylla HOM05D006408 ORTHO05D008038 7.6e-125 451.1 337 71.8
Atru.chr13.1568 Acer truncatum HOM05D006408 ORTHO05D008038 2.9e-124 449.1 330 69.7
MSTRG.22398 Avicennia marina HOM05D006408 ORTHO05D008038 2.9e-124 449.1 339 70.8
Ca_16607_v3 Cicer arietinum L. HOM05D006408 ORTHO05D008038 4.2e-123 445.3 334 68.3
Cc10_g13760 Coffea canephora HOM05D006408 ORTHO05D008038 4.2e-123 445.3 333 71.2
CSS0036755 Camellia sinensis var. sinensis HOM05D006408 ORTHO05D008038 5.5e-123 444.9 323 72.1
DCAR_003587 Daucus carota HOM05D006408 ORTHO05D008038 7.1e-123 444.5 254 84.6
Eucgr.A00239 Eucalyptus grandis HOM05D006408 ORTHO05D008038 1.6e-122 443.4 287 78.7
AT1G21600 Arabidopsis thaliana HOM05D006408 ORTHO05D008038 2.1e-122 443.0 285 77.2
Glyma.06G117500 Glycine max HOM05D006408 ORTHO05D008038 6.0e-122 441.4 333 65.2
VMungo1309G0712 Vigna mungo HOM05D006408 ORTHO05D008038 6.0e-122 441.4 332 66.6
FAN20G2488 Fragaria x ananassa HOM05D006408 ORTHO05D008038 1.0e-121 440.7 333 68.8
HanXRQChr02g0045521 Helianthus annuus HOM05D006408 ORTHO05D008038 1.3e-121 440.3 346 67.1
Glyma.04G087000 Glycine max HOM05D006408 ORTHO05D008038 5.1e-121 438.3 326 66.9
Sed0021255 Sechium edule HOM05D006408 ORTHO05D008038 6.7e-121 438.0 329 69.6
CDE06G0572 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 1.1e-120 437.2 326 66.3
Phvul.009G129900 Phaseolus vulgaris HOM05D006408 ORTHO05D008038 1.5e-120 436.8 333 66.1
Oeu047179.2 Olea europaea HOM05D006408 ORTHO05D008038 7.4e-120 434.5 340 70.3
Medtr3g088605 Medicago truncatula HOM05D006408 ORTHO05D008038 1.6e-119 433.3 334 65.9
FAN27G1901 Fragaria x ananassa HOM05D006408 ORTHO05D008038 8.2e-119 431.0 340 67.6
Psat5g084760 Pisum sativum HOM05D006408 ORTHO05D008038 3.1e-118 429.1 323 68.4
FAN24G2159 Fragaria x ananassa HOM05D006408 ORTHO05D008038 5.3e-118 428.3 340 67.9
BcaC05g26077 Brassica carinata HOM05D006408 ORTHO05D008038 4.5e-117 425.2 285 75.8
Lalb_Chr08g0241101 Lupinus albus HOM05D006408 ORTHO05D008038 4.5e-117 425.2 336 64.6
CDE04G0676 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 2.2e-116 422.9 314 66.6
ATR0568G086 Amborella trichopoda HOM05D006408 ORTHO05D008038 3.8e-116 422.2 324 66.0
arahy.Tifrunner.gnm1.ann1.227FW7 Arachis hypogaea HOM05D006408 ORTHO05D008038 3.8e-116 422.2 331 67.4
Gohir.D02G078200 Gossypium hirsutum HOM05D006408 ORTHO05D008038 3.8e-116 422.2 335 67.8
Lj4A682G50 Lonicera japonica HOM05D006408 ORTHO05D008038 3.8e-116 422.2 247 81.0
arahy.Tifrunner.gnm1.ann1.8X384Y Arachis hypogaea HOM05D006408 ORTHO05D008038 8.4e-116 421.0 328 68.3
Ciclev10001886m.g Citrus clementina HOM05D006408 ORTHO05D008038 1.1e-115 420.6 335 67.5
Migut.N03260 Erythranthe guttata HOM05D006408 ORTHO05D008038 2.5e-115 419.5 336 67.3
ECA236G3303 Erigeron canadensis HOM05D006408 ORTHO05D008038 3.2e-115 419.1 344 65.1
TPR.G28811 Trifolium pratense HOM05D006408 ORTHO05D008038 3.2e-115 419.1 328 64.3
Carub.0001s2103 Capsella rubella HOM05D006408 ORTHO05D008038 2.1e-114 416.4 225 86.7
FAN15G0171 Fragaria x ananassa HOM05D006408 ORTHO05D008038 3.9e-113 412.1 253 77.1
GSVIVG01008807001 Vitis vinifera HOM05D006408 ORTHO05D008038 6.7e-113 411.4 222 87.4
BcaB07g32155 Brassica carinata HOM05D006408 ORTHO05D008038 1.9e-112 409.8 289 73.0
HPP92_009911 Vanilla planifolia HOM05D006408 ORTHO05D008038 2.2e-111 406.4 284 70.1
QL09p032485 Quercus lobata HOM05D006408 ORTHO05D008038 8.2e-111 404.4 223 84.3
Lsat_1_v5_gn_1_7780 Lactuca sativa HOM05D006408 ORTHO05D008038 6.9e-110 401.4 340 65.0
FvH4_2g27850 Fragaria vesca HOM05D006408 ORTHO05D008038 2.2e-108 396.4 225 80.9
Ah.10g032560 Amaranthus hybridus HOM05D006408 ORTHO05D008038 1.2e-106 390.6 328 63.7
Lj1g0002290 Lotus japonicus HOM05D006408 ORTHO05D008038 2.7e-106 389.4 284 69.4
SGA_v2.0_scaffold25G11139 Striga asiatica HOM05D006408 ORTHO05D008038 2.8e-103 379.4 361 57.3
A08p28910 Brassica napus HOM05D006408 ORTHO05D008038 2.4e-102 376.3 205 86.8
BolC8t49731H Brassica oleracea HOM05D006408 ORTHO05D008038 5.3e-102 375.2 340 60.6
Gohir.A02G071000 Gossypium hirsutum HOM05D006408 ORTHO05D008038 5.1e-97 358.6 335 61.2
Hund17341 Selenicereus undatus HOM05D006408 ORTHO05D008038 5.7e-96 355.1 290 64.8
Thhalv10007813m.g Eutrema salsugineum HOM05D006408 ORTHO05D008038 1.8e-94 350.1 216 76.4
AUR62007717 Chenopodium quinoa HOM05D006408 ORTHO05D008038 6.9e-94 348.2 313 61.0
AUR62013426 Chenopodium quinoa HOM05D006408 ORTHO05D008038 1.5e-93 347.1 325 59.7
Zm00001eb195160 Zea mays HOM05D006408 ORTHO05D008038 1.5e-93 347.1 258 65.1
Rhsim06G0091400 Rhododendron simsii HOM05D006408 ORTHO05D008038 3.4e-93 345.9 486 45.5
Os11g0110100 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 1.0e-92 344.4 225 71.6
Os12g0110400 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 1.0e-92 344.4 225 71.6
Sc26g0002930 Simmondsia chinensis HOM05D006408 ORTHO05D008038 3.2e-83 312.8 258 64.3
SEGI_15088 Sequoiadendron giganteum HOM05D006408 ORTHO05D008038 2.1e-82 310.1 285 56.1
C08p20930 Brassica napus HOM05D006408 ORTHO05D008038 6.1e-82 308.5 171 85.4
vmacro20822 Vaccinium macrocarpon HOM05D006408 ORTHO05D008038 1.3e-76 290.8 167 82.0
Mapoly0008s0219 Marchantia polymorpha HOM05D006408 ORTHO05D008038 3.8e-76 289.3 285 48.8
Duzib093G1884 Durio zibethinus HOM05D006408 ORTHO05D008038 8.8e-73 278.1 224 64.7
Pp3c1_1000 Physcomitrium patens HOM05D006408 ORTHO05D008038 1.2e-72 277.7 284 49.3
BraA08t34821Z Brassica rapa HOM05D006408 ORTHO05D008038 5.5e-67 258.8 144 85.4
COL.COLO4_06961 Corchorus olitorius HOM05D006408 ORTHO05D008038 3.4e-64 249.6 227 61.2
CsaV3_5G019980 Cucumis sativus L. HOM05D006408 ORTHO05D008038 4.1e-62 242.7 225 56.9
SMO146G0302 Selaginella moellendorffii HOM05D006408 ORTHO05D008038 9.2e-62 241.5 205 54.6
CsaV3_UNG224650 Cucumis sativus L. HOM05D006408 ORTHO05D008038 4.3e-59 232.6 219 57.5
SalBow2G2951 Salvia bowleyana HOM05D006408 ORTHO05D008038 3.6e-58 229.6 118 88.1
Dinv14691 Davidia involucrata HOM05D006408 ORTHO05D008038 1.5e-56 224.2 179 67.6
MBI03_g28486_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 2.0e-56 223.8 246 52.8
MBI03_g39652_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 1.0e-44 184.9 158 61.4
Sabra02G0061800 Salix brachista HOM05D006408 ORTHO05D008038 2.3e-41 173.7 97 85.6
Aqoxy219s001 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 3.5e-37 159.8 109 73.4
CBR_g40143 Chara braunii HOM05D006408 ORTHO05D008038 1.1e-33 148.3 175 41.7
CsaV3_5G018920 Cucumis sativus L. HOM05D006408 ORTHO05D008038 4.6e-29 132.9 154 48.7
BolC5t30909H Brassica oleracea HOM05D006408 ORTHO05D008038 9.6e-27 125.2 61 91.8
Actinidia21278 Actinidia chinensis HOM05D006408 ORTHO05D008038 2.4e-22 110.5 104 56.7
AagrBONN_evm.TU.Sc2ySwM_344.4901 Anthoceros agrestis HOM05D006408 ORTHO05D008038 4.6e-21 106.3 143 42.7
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.6e-13 81.3 43 88.4
Actinidia21279 Actinidia chinensis HOM05D006408 ORTHO05D008038 2.5e-11 73.9 158 38.6
CsaV3_UNG111870 Cucumis sativus L. HOM05D006408 ORTHO05D008038 5.3e-09 66.2 68 51.5
CsaV3_UNG115880 Cucumis sativus L. HOM05D006408 ORTHO05D008038 5.3e-09 66.2 68 51.5
CsaV3_5G018930 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.9e-06 57.8 59 50.8


User provided reference genes

Program Settings