Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 5.8e-297 1023.5 519 100.0
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 2.1e-270 935.3 532 89.7
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 1.3e-269 932.6 532 89.5
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 5.1e-269 930.6 532 89.3
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 1.5e-268 929.1 532 90.8
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 5.3e-250 867.5 531 84.7
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 7.7e-225 783.9 536 75.6
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 7.5e-220 767.3 535 73.8
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 9.8e-220 766.9 535 73.8
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 1.3e-219 766.5 520 75.0
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 9.2e-218 760.4 538 73.4
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 9.5e-215 750.4 519 75.0
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 1.3e-211 740.0 527 74.2
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 5.4e-210 734.6 468 79.5
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 1.6e-209 733.0 526 72.6
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 3.5e-209 731.9 536 71.1
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 6.0e-209 731.1 497 75.3
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 3.9e-208 728.4 537 71.7
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 3.9e-208 728.4 537 71.1
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 6.6e-208 727.6 534 71.9
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 5.6e-207 724.5 548 69.5
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 1.6e-206 723.0 554 69.1
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 4.7e-206 721.5 539 70.5
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 8.1e-206 720.7 540 69.8
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 1.8e-205 719.5 553 70.3
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 3.1e-205 718.8 533 70.2
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 4.0e-205 718.4 535 70.7
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 4.0e-205 718.4 559 69.4
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 8.9e-205 717.2 490 74.3
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 1.2e-204 716.8 594 66.0
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 2.0e-204 716.1 439 82.2
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.4e-204 715.3 561 68.3
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 9.8e-204 713.8 558 67.7
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 1.7e-203 713.0 550 69.6
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 8.3e-203 710.7 506 73.3
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 5.4e-202 708.0 534 70.6
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 7.1e-202 707.6 538 70.8
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 7.1e-202 707.6 480 76.9
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 3.9e-200 701.8 469 76.8
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 8.6e-200 700.7 538 69.0
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 1.5e-199 699.9 488 73.2
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 5.6e-199 698.0 506 70.8
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 7.3e-199 697.6 538 69.0
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 4.7e-198 694.9 527 69.6
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 4.7e-198 694.9 541 67.8
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 3.1e-197 692.2 533 68.7
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 4.0e-197 691.8 539 67.9
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 1.3e-195 686.8 447 78.1
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 3.7e-195 685.3 561 65.6
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 4.9e-195 684.9 528 68.9
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 6.4e-195 684.5 543 67.4
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 1.1e-194 683.7 522 69.2
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 9.2e-194 680.6 543 67.0
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 3.5e-193 678.7 533 68.3
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 2.3e-192 676.0 533 67.9
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 5.1e-192 674.9 539 66.6
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 1.5e-191 673.3 534 67.8
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 4.3e-191 671.8 530 68.3
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 2.1e-190 669.5 539 66.4
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 2.8e-190 669.1 447 77.0
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 3.6e-190 668.7 543 66.7
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 4.7e-190 668.3 528 68.4
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 4.7e-190 668.3 481 72.1
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 1.1e-189 667.2 529 68.2
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 1.1e-189 667.2 529 68.2
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 1.1e-189 667.2 548 65.9
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 1.2e-188 663.7 490 70.4
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 2.0e-188 662.9 476 72.3
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 5.8e-188 661.4 492 71.1
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 1.3e-187 660.2 479 72.0
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 4.9e-187 658.3 536 67.0
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 4.9e-187 658.3 480 72.5
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 8.4e-187 657.5 501 69.5
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 5.4e-186 654.8 479 71.6
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 3.5e-185 652.1 498 69.9
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 4.6e-185 651.7 482 70.3
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 7.8e-185 651.0 493 69.6
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 1.7e-184 649.8 480 71.5
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 7.3e-183 644.4 517 67.1
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 1.4e-181 640.2 492 69.3
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 3.4e-180 635.6 492 68.7
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 9.9e-180 634.0 483 69.4
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 1.7e-179 633.3 516 65.9
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 1.1e-178 630.6 488 67.2
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 2.4e-178 629.4 502 67.7
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 1.6e-177 626.7 530 62.6
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 1.7e-176 623.2 528 62.9
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 2.1e-174 616.3 466 70.2
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 6.2e-174 614.8 481 68.2
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 6.2e-174 614.8 455 70.3
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 4.6e-169 598.6 426 71.4
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 3.3e-167 592.4 427 72.6
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 3.7e-158 562.4 417 68.1
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 4.3e-151 538.9 490 60.8
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 5.0e-147 525.4 493 59.2
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 1.9e-106 390.6 393 55.2
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 2.2e-102 377.1 305 64.9
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 8.6e-99 365.2 263 71.5
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 1.4e-88 331.3 265 66.4
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 7.8e-84 315.5 263 65.8
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 1.3e-83 314.7 456 42.8
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 6.2e-81 305.8 167 85.0
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 2.2e-78 297.4 269 61.0
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 1.3e-75 288.1 421 42.3
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 1.9e-69 267.7 204 68.6
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.2e-63 248.4 358 38.5
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 2.2e-62 244.2 474 34.8
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 1.3e-59 235.0 146 80.8
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 8.7e-59 232.3 125 84.8
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 2.8e-57 227.3 125 86.4
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 7.6e-55 219.2 271 49.4
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 3.0e-51 207.2 148 66.2
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 2.5e-50 204.1 167 67.1
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 1.5e-42 178.3 247 40.9
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 2.5e-34 151.0 80 85.0
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 2.0e-31 141.4 108 77.8
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 1.0e-30 139.0 219 40.6
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 9.1e-24 115.9 92 68.5
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 3.4e-23 114.0 71 70.4
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 7.2e-21 106.3 83 74.7
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 6.7e-19 99.8 101 60.4
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 9.7e-18 95.9 53 83.0
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 2.2e-17 94.7 114 54.4
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 3.5e-15 87.4 76 61.8
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.7e-14 85.1 131 45.0
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 1.7e-14 85.1 93 48.4
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 3.8e-14 84.0 139 46.8
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 7.2e-13 79.7 67 73.1
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 2.1e-12 78.2 49 67.3
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 1.2e-07 62.4 32 87.5


User provided reference genes

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