Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 2.2e-106 389.0 201 100.0
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 3.4e-104 381.7 201 98.5
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 2.6e-96 355.5 198 93.4
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 1.0e-95 353.6 201 91.5
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 2.2e-95 352.4 201 91.5
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 2.3e-92 342.4 192 92.7
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 2.6e-88 328.9 197 86.8
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 3.0e-84 315.5 196 81.6
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 3.0e-84 315.5 194 84.0
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 8.8e-84 313.9 193 82.9
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 1.1e-83 313.5 189 83.1
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 1.1e-83 313.5 189 83.1
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.1e-83 313.5 191 81.7
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 2.6e-83 312.4 192 82.8
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 5.7e-83 311.2 194 80.4
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 9.7e-83 310.5 191 83.2
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 4.8e-82 308.1 196 79.6
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 8.2e-82 307.4 198 78.8
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 1.1e-81 307.0 191 80.6
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 1.1e-81 307.0 196 78.6
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 1.4e-81 306.6 197 78.7
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 1.8e-81 306.2 198 78.3
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 2.4e-81 305.8 194 78.4
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 3.1e-81 305.4 196 79.6
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 4.1e-81 305.1 195 80.0
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 9.1e-81 303.9 194 80.4
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 9.1e-81 303.9 191 80.1
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 1.2e-80 303.5 191 80.6
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 1.2e-80 303.5 197 76.1
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 1.6e-80 303.1 191 79.6
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 2.6e-80 302.4 193 78.2
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 2.6e-80 302.4 194 78.9
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 3.5e-80 302.0 194 78.9
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 3.5e-80 302.0 198 78.3
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 5.9e-80 301.2 192 80.2
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 1.0e-79 300.4 191 80.1
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 1.3e-79 300.1 198 75.8
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 1.7e-79 299.7 194 76.3
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 2.9e-79 298.9 192 80.2
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 5.0e-79 298.1 195 76.9
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 1.5e-78 296.6 200 76.5
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.9e-78 296.2 191 79.1
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 3.2e-78 295.4 205 73.2
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 5.5e-78 294.7 188 77.7
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 9.4e-78 293.9 197 76.1
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 9.4e-78 293.9 187 77.5
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 9.4e-78 293.9 187 77.5
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 1.2e-77 293.5 205 73.2
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 1.2e-77 293.5 188 77.1
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 1.2e-77 293.5 191 77.0
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 1.6e-77 293.1 193 76.7
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 2.1e-77 292.7 196 78.1
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.1e-77 292.7 187 77.0
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.1e-77 292.7 194 77.8
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 6.1e-77 291.2 196 76.5
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 6.1e-77 291.2 200 76.0
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 1.0e-76 290.4 193 75.1
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 1.4e-76 290.0 195 76.4
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 3.0e-76 288.9 188 79.3
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.5e-75 286.6 197 74.1
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 1.5e-75 286.6 188 77.7
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 3.3e-75 285.4 218 69.7
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 3.3e-75 285.4 186 78.5
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 3.3e-75 285.4 178 79.2
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 7.5e-75 284.3 186 80.1
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 1.3e-74 283.5 188 76.6
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 1.3e-74 283.5 188 76.6
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 2.2e-74 282.7 204 75.0
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 2.8e-74 282.3 188 76.1
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 2.8e-74 282.3 188 74.5
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 3.7e-74 282.0 190 75.8
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 3.7e-74 282.0 194 72.7
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 4.8e-74 281.6 188 76.1
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 4.8e-74 281.6 190 76.3
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 6.3e-74 281.2 188 76.1
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 8.2e-74 280.8 244 62.7
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 1.1e-73 280.4 255 60.8
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 1.4e-73 280.0 196 75.5
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 1.2e-72 276.9 188 77.1
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 2.7e-72 275.8 190 73.7
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 5.9e-72 274.6 188 74.5
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 1.7e-71 273.1 194 72.7
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 2.2e-71 272.7 188 73.9
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 2.9e-71 272.3 204 72.1
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 3.8e-71 271.9 204 73.5
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 1.9e-70 269.6 190 73.2
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 3.4e-67 258.8 190 68.4
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.3e-66 256.9 163 78.5
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 7.7e-64 247.7 188 68.1
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 2.9e-63 245.7 170 72.4
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 2.0e-59 233.0 195 64.1
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 1.7e-58 229.9 148 77.0
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.2e-58 229.6 166 74.1
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.7e-58 228.8 194 64.9
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 3.7e-58 228.8 193 65.3
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 1.8e-57 226.5 185 63.2
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 5.9e-56 221.5 187 64.2
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 2.8e-53 212.6 141 78.0
ATR0724G057 Amborella trichopoda HOM05D000780 ORTHO05D008187 1.2e-48 197.2 110 89.1
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 2.0e-48 196.4 136 73.5
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 1.3e-47 193.7 126 81.7
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 6.6e-47 191.4 250 50.0
DCAR_005521 Daucus carota HOM05D000780 ORTHO05D008187 6.6e-47 191.4 112 85.7
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 8.6e-47 191.0 141 70.9
SEGI_30710 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 1.1e-46 190.7 113 83.2
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 1.8e-44 183.3 138 68.1
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 1.2e-40 170.6 198 51.0
MCO11G401 Micromonas commoda HOM05D000780 ORTHO05D008187 3.3e-38 162.5 200 48.0
QL01p042037 Quercus lobata HOM05D000780 ORTHO05D008187 2.1e-37 159.8 84 92.9
Thecc.07G153800 Theobroma cacao HOM05D000780 ORTHO05D008187 6.2e-37 158.3 105 76.2
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 2.6e-35 152.9 116 68.1
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 9.9e-35 151.0 114 70.2
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 2.4e-33 146.4 138 58.0
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 1.0e-31 141.0 140 53.6
MD04G1233000 Malus domestica HOM05D000780 ORTHO05D008187 8.4e-26 121.3 141 53.9
PRCOL_00002874 Prasinoderma coloniale HOM05D000780 ORTHO05D008187 3.0e-23 112.8 127 51.2
Dinv06000 Davidia involucrata HOM05D000780 ORTHO05D008187 7.3e-22 108.2 62 87.1
Cfa025943 Carpinus fangiana HOM05D000780 ORTHO05D008187 4.0e-20 102.4 202 36.1
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.7e-18 97.1 81 59.3
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 5.1e-15 85.5 81 55.6
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 6.9e-12 75.1 109 45.0
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 1.3e-10 70.9 56 64.3
Psat7g095160 Pisum sativum HOM05D000780 ORTHO05D008187 9.3e-09 64.7 52 57.7
SalBow1G6941 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.0e-07 61.2 54 57.4


User provided reference genes

Program Settings