Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000520g0050 Nicotiana tabacum HOM05D004199 ORTHO05D005905 3.1e-107 391.7 189 100.0
Nitab4.5_0007631g0010 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.4e-70 270.0 203 72.9
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 7.6e-37 157.9 200 50.5
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 9.9e-37 157.5 208 49.5
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 3.2e-35 152.5 208 48.6
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 2.1e-34 149.8 209 47.8
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 3.9e-33 145.6 209 46.4
Solyc05g009850.4 Solanum lycopersicum HOM05D004199 ORTHO05D005905 6.6e-33 144.8 209 46.4
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 6.6e-33 144.8 209 46.4
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 6.2e-31 138.3 207 42.0
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 1.8e-30 136.7 217 41.9
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 9.0e-30 134.4 215 42.3
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 9.9e-29 131.0 202 43.6
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 1.3e-28 130.6 211 41.7
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 3.8e-28 129.0 208 40.9
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 3.8e-28 129.0 180 43.9
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 4.9e-28 128.6 208 40.4
Oeu041359.1 Olea europaea HOM05D004199 ORTHO05D005905 4.9e-28 128.6 214 42.1
GSVIVG01011956001 Vitis vinifera HOM05D004199 ORTHO05D005905 6.4e-28 128.3 198 44.4
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 1.4e-27 127.1 202 40.1
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 1.4e-27 127.1 208 43.3
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 1.9e-27 126.7 208 41.3
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 4.2e-27 125.6 218 39.4
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 4.2e-27 125.6 201 40.8
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 5.4e-27 125.2 206 40.3
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 5.4e-27 125.2 215 40.5
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 1.6e-26 123.6 216 38.4
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 2.7e-26 122.9 206 39.3
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 2.7e-26 122.9 209 41.6
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 2.7e-26 122.9 206 40.3
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 2.7e-26 122.9 196 40.8
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 2.7e-26 122.9 207 41.5
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 2.7e-26 122.9 211 39.8
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 3.5e-26 122.5 202 39.1
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 4.6e-26 122.1 193 40.9
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 6.0e-26 121.7 200 42.5
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 1.0e-25 120.9 202 39.1
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 1.3e-25 120.6 190 44.7
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 1.3e-25 120.6 208 38.5
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 1.3e-25 120.6 208 38.9
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 3.0e-25 119.4 202 39.1
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 3.9e-25 119.0 205 39.5
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 6.7e-25 118.2 203 39.4
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 1.1e-24 117.5 206 39.3
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 1.1e-24 117.5 206 39.3
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 1.1e-24 117.5 208 39.4
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 1.1e-24 117.5 196 39.8
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 1.1e-24 117.5 206 37.9
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 1.1e-24 117.5 207 37.7
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 1.5e-24 117.1 201 38.8
AUR62042759 Chenopodium quinoa HOM05D004199 ORTHO05D005905 2.5e-24 116.3 215 37.7
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 2.5e-24 116.3 201 36.8
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 3.3e-24 115.9 201 36.8
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 4.3e-24 115.5 206 38.3
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 4.3e-24 115.5 208 39.9
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 5.6e-24 115.2 201 36.3
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 5.6e-24 115.2 192 40.1
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 7.4e-24 114.8 198 38.4
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 9.6e-24 114.4 199 42.7
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 1.3e-23 114.0 202 36.6
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 1.3e-23 114.0 215 37.7
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 1.3e-23 114.0 195 41.0
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 1.6e-23 113.6 197 42.1
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 1.6e-23 113.6 215 37.7
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 1.6e-23 113.6 201 37.8
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.6e-23 113.6 201 37.8
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 1.6e-23 113.6 201 37.8
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 1.6e-23 113.6 201 36.3
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 2.1e-23 113.2 201 39.3
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 2.1e-23 113.2 201 39.3
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 3.7e-23 112.5 216 37.5
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 3.7e-23 112.5 198 37.4
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 3.7e-23 112.5 201 37.3
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 4.8e-23 112.1 201 38.3
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 4.8e-23 112.1 208 36.5
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 6.2e-23 111.7 193 38.9
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 8.1e-23 111.3 202 39.1
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 8.1e-23 111.3 200 41.0
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 8.1e-23 111.3 200 41.0
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 8.1e-23 111.3 195 40.5
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 4.0e-22 109.0 201 37.3
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 6.9e-22 108.2 202 35.6
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 6.9e-22 108.2 198 38.4
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 6.9e-22 108.2 198 37.9
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 1.2e-21 107.5 198 37.9
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 1.5e-21 107.1 186 39.2
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 1.5e-21 107.1 186 39.2
Rhsim01G0212500 Rhododendron simsii HOM05D004199 ORTHO05D005905 1.5e-21 107.1 217 37.3
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 2.0e-21 106.7 199 37.2
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 2.6e-21 106.3 197 37.6
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 2.6e-21 106.3 201 37.3
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 3.4e-21 105.9 199 36.2
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 2.9e-20 102.8 200 37.0
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 2.9e-20 102.8 196 37.8
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 1.1e-19 100.9 197 37.1
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 3.2e-19 99.4 187 35.8
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 3.2e-19 99.4 195 34.4
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 4.6e-18 95.5 188 34.0
Glyma.18G205900 Glycine max HOM05D004199 ORTHO05D005905 1.0e-17 94.4 165 37.6
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 1.8e-17 93.6 211 30.8
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 3.0e-17 92.8 202 33.2
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 3.9e-17 92.4 188 32.4
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 3.9e-17 92.4 188 32.4
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 8.7e-17 91.3 182 34.6
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.9e-16 90.1 194 37.6
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 1.9e-16 90.1 187 31.6
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 1.9e-16 90.1 187 31.6
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 1.4e-14 84.0 189 30.7
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.6e-13 79.7 160 33.1
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 2.6e-13 79.7 158 34.8
CBR_g46838 Chara braunii HOM05D004199 ORTHO05D005905 5.8e-13 78.6 194 30.4
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 7.6e-13 78.2 155 32.9
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 1.0e-12 77.8 155 32.3
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 1.3e-12 77.4 193 29.5
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 1.3e-12 77.4 195 29.2
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 1.3e-12 77.4 182 32.4
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 2.2e-12 76.6 152 33.6
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 2.9e-12 76.3 193 29.0
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 3.2e-11 72.8 152 32.9
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 3.5e-10 69.3 118 40.7
EL10Ac6g14565 Beta vulgaris HOM05D004199 ORTHO05D005905 6.1e-10 68.6 146 32.2
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 1.0e-09 67.8 118 40.7
AT5G09210 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 1.8e-09 67.0 207 30.4
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 3.0e-09 66.2 67 52.2
CARHR069330 Cardamine hirsuta HOM05D004199 ORTHO05D005905 1.9e-08 63.5 88 40.9
CARHR203800 Cardamine hirsuta HOM05D004199 ORTHO05D005905 4.3e-08 62.4 99 38.4


User provided reference genes

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